Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1256
Parameters: 2 7 7 80 10 50 1000
Length:  18436

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2892--3111
81
2.7
82
83
8
270
39
15
22
23
1.92
2892--3114
41
5.5
40
84
7
254
39
15
22
22
1.92
3106--3481
61
6.2
60
85
5
443
28
17
27
26
1.98
3090--3461
120
3.0
121
84
5
489
29
18
27
25
1.98
3106--3484
181
2.1
183
87
5
545
29
17
27
25
1.98
4450--4510
10
5.9
10
79
7
59
3
9
3
83
0.87
4465--4510
8
5.8
8
89
0
56
2
6
4
86
0.75
7327--7453
32
4.0
31
79
7
103
25
18
25
29
1.98
8194--8259
20
3.7
20
73
26
83
24
18
18
39
1.92
8213--8272
13
5.1
13
69
22
60
26
16
16
40
1.90
8194--8291
33
3.0
33
93
1
162
26
17
16
39
1.90
14179--14207
13
2.2
13
100
0
58
27
13
17
41
1.87
18200--18397
78
2.6
78
81
3
222
31
15
26
26
1.95

Tables:   1

The End!