Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1262
Parameters: 2 7 7 80 10 50 1000
Length:  38962

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
907--931
2
12.5
2
100
0
50
48
0
0
52
1.00
1499--1556
21
2.8
20
82
10
62
50
0
1
48
1.11
6148--6177
3
9.7
3
92
7
51
66
0
0
33
0.92
6838--6919
8
9.8
8
79
17
78
13
35
0
51
1.41
6877--6947
12
6.2
12
75
15
71
12
30
0
56
1.37
6854--6961
44
2.5
44
98
0
207
12
33
0
52
1.46
6837--6955
8
13.8
9
71
20
62
13
33
0
52
1.40
7196--7269
10
7.4
10
75
11
53
33
24
10
31
1.90
8143--8196
8
6.8
8
97
0
99
12
38
0
48
1.42
8134--8196
24
2.6
24
92
0
99
11
39
0
49
1.38
8198--8260
12
5.2
12
81
7
83
12
30
0
57
1.36
8183--8268
36
2.4
36
100
0
172
13
31
0
54
1.40
8549--8582
10
3.4
10
87
0
50
38
20
8
32
1.84
11153--11205
26
2.0
26
100
0
106
37
18
13
30
1.89
16824--16864
19
2.2
19
90
0
64
31
12
19
36
1.89
19211--19240
6
5.0
6
91
0
51
30
3
0
66
1.07
21969--22000
13
2.5
13
94
0
55
12
3
15
68
1.32
23700--23742
2
21.5
2
100
0
86
51
48
0
0
1.00
27567--27613
2
23.5
2
91
0
76
46
0
4
48
1.21
28767--28799
3
11.0
3
93
0
57
33
3
0
63
1.10
28884--28909
4
6.5
4
100
0
52
76
0
0
23
0.78
33724--34056
167
2.0
167
95
1
605
29
18
18
32
1.96

Tables:   1

The End!