Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1264
Parameters: 2 7 7 80 10 50 1000
Length:  21785

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
556--592
3
12.3
3
100
0
74
0
35
0
64
0.94
5722--5788
33
2.0
33
100
0
134
44
5
2
46
1.43
6334--6382
14
3.4
14
83
16
57
48
0
0
51
1.00
7332--7385
23
2.3
22
78
15
54
61
1
7
29
1.34
8468--8524
24
2.3
26
75
6
64
36
1
0
61
1.07
8954--9028
15
4.7
15
71
24
55
53
1
0
45
1.08
8975--9028
15
3.7
15
78
9
58
53
1
0
44
1.11
8951--9081
22
5.7
22
72
20
83
48
2
1
48
1.23
8957--9062
24
4.3
25
71
25
75
50
0
1
47
1.18
11009--11036
2
14.0
2
100
0
56
50
0
0
50
1.00
14012--14053
19
2.2
19
83
8
50
57
0
0
42
0.99
18148--18198
2
25.5
2
100
0
102
50
0
49
0
1.00
19099--19196
14
7.1
14
72
10
78
29
21
19
29
1.97
19135--19232
14
7.2
14
72
6
76
28
24
22
24
1.99
19135--19230
27
3.6
27
75
4
86
28
25
21
25
1.99
19781--19819
17
2.6
14
78
21
51
28
15
17
38
1.91
20375--20414
22
1.9
20
90
10
62
52
5
0
42
1.23
20374--20420
20
2.2
21
82
17
62
51
6
0
42
1.27

Tables:   1

The End!