Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1266
Parameters: 2 7 7 80 10 50 1000
Length:  43340

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3157--3291
72
1.9
71
82
11
168
38
1
5
54
1.34
4215--4249
1
35.0
1
88
0
52
94
0
5
0
0.32
4215--4249
13
2.8
13
95
4
63
94
0
5
0
0.32
4215--4249
18
1.9
18
94
0
61
94
0
5
0
0.32
7339--7380
19
2.2
20
83
12
52
61
2
28
7
1.35
12534--12585
1
52.0
1
84
0
68
92
1
5
0
0.45
12534--12592
17
3.1
19
85
9
77
88
3
8
0
0.63
13484--13521
15
2.4
16
86
8
60
10
5
5
78
1.06
14733--14788
29
1.9
29
82
13
71
44
3
1
50
1.29
15774--15810
1
37.0
1
94
0
65
97
0
2
0
0.18
15774--15813
21
1.9
21
100
0
80
95
0
5
0
0.29
17198--17246
16
3.1
15
78
16
55
57
0
0
42
0.99
35074--35137
20
3.4
18
74
18
60
35
0
0
64
0.94
36263--36291
2
14.5
2
100
0
58
51
0
0
48
1.00
36745--36788
19
2.3
18
81
14
52
45
0
2
52
1.13
38053--38092
21
1.9
21
89
0
62
10
32
12
45
1.75
38917--38962
2
23.5
2
91
4
76
50
2
0
47
1.13
39093--39132
14
2.9
14
88
3
55
57
0
0
42
0.98
39744--39798
21
2.7
20
78
15
58
47
1
0
50
1.11
39755--39797
22
2.0
23
86
9
63
41
2
0
55
1.12
39744--39805
22
2.8
23
81
11
60
46
1
0
51
1.10
41714--41750
2
18.5
2
100
0
74
48
0
0
51
1.00

Tables:   1

The End!