Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1267
Parameters: 2 7 7 80 10 50 1000
Length:  38754

Tables:   1   

This is table  1  of  1  ( 46 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
239--357
51
2.3
50
85
2
166
31
25
10
32
1.90
290--435
79
1.8
79
85
2
204
30
26
11
31
1.92
197--564
130
2.8
129
82
6
447
28
24
12
33
1.92
370--484
51
2.3
51
84
0
140
30
27
11
30
1.91
443--637
79
2.4
78
79
13
218
26
22
15
36
1.93
4754--4900
79
1.9
79
86
0
213
36
11
22
29
1.89
4860--4934
28
2.6
30
81
8
95
26
17
32
24
1.97
4908--5033
51
2.5
51
82
2
155
33
11
26
27
1.92
7469--7519
25
2.0
25
92
0
84
49
15
11
23
1.78
10028--10071
23
1.9
23
86
9
63
40
0
0
59
0.98
10438--10493
21
2.7
21
73
24
55
67
0
1
30
1.01
10750--10784
2
18.0
2
94
5
63
48
0
0
51
1.00
12166--12221
19
2.8
19
78
7
67
30
16
12
41
1.85
14332--14379
25
1.9
25
86
0
69
43
0
0
56
0.99
14433--14493
27
2.2
28
83
13
83
63
0
0
36
0.94
14444--14499
20
2.9
18
77
12
58
71
0
0
28
0.86
14736--14802
8
8.2
8
80
14
75
83
0
16
0
0.64
14739--14803
9
7.3
9
81
11
73
84
0
15
0
0.62
14726--14802
34
2.2
35
84
9
104
80
0
19
0
0.71
15077--15117
21
2.0
22
85
9
59
21
2
9
65
1.34
18489--18530
16
2.6
16
81
14
50
54
0
0
45
0.99
18789--18909
58
2.1
59
82
3
147
48
4
9
38
1.54
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18967--19002
19
1.9
19
88
5
56
27
2
0
69
1.02
19147--19188
17
2.7
16
85
10
52
50
0
0
50
1.00
19269--19306
14
2.7
14
88
11
60
21
0
7
71
1.11
19274--19320
15
3.1
15
81
6
58
19
0
6
74
1.03
20109--20157
24
2.1
23
84
3
62
48
0
0
51
1.00
20189--20275
30
2.9
30
73
11
90
49
1
0
49
1.08
20211--20287
28
2.7
28
78
8
75
54
1
0
44
1.08
20703--20763
25
2.5
25
84
7
81
50
0
0
49
1.00
20703--20762
28
2.3
28
86
11
83
50
0
0
50
1.00
24407--24444
2
19.0
2
100
0
76
50
0
0
50
1.00
26278--26319
19
2.2
20
87
12
61
45
0
21
33
1.52
26760--26878
51
2.3
50
85
2
166
31
25
10
32
1.90
26811--26956
79
1.8
79
85
2
204
30
26
11
31
1.92
26718--27085
130
2.8
129
82
6
447
28
24
12
33
1.92
26891--27005
51
2.3
51
84
0
140
30
27
11
30
1.91
26964--27158
79
2.5
79
80
7
200
26
21
15
36
1.93
31273--31419
79
1.9
79
86
0
213
36
11
22
29
1.89
31379--31453
28
2.6
30
81
8
95
26
17
32
24
1.97
31427--31534
52
2.1
52
85
3
146
38
8
24
28
1.84
33989--34039
25
2.0
25
92
0
84
49
15
11
23
1.78
36546--36589
23
1.9
23
86
9
63
40
0
0
59
0.98
36956--37011
21
2.7
21
73
24
55
67
0
1
30
1.01
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37269--37303
2
18.0
2
94
5
63
48
0
0
51
1.00
38687--38742
19
2.8
19
78
7
67
30
16
12
41
1.85

Tables:   1

The End!