Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1274
Parameters: 2 7 7 80 10 50 1000
Length:  15250

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
516--560
15
3.0
14
81
15
54
62
0
2
35
1.08
523--560
15
2.5
15
91
4
58
65
0
0
34
0.93
3100--3145
19
2.3
20
82
14
60
39
0
2
58
1.10
4513--4601
25
3.6
25
74
10
69
42
1
0
56
1.06
4515--4595
15
5.9
14
80
13
89
39
1
0
59
1.05
4477--4562
13
6.8
13
71
5
70
45
2
0
52
1.13
6183--6255
9
7.8
9
76
21
62
67
0
0
32
0.91
6183--6251
18
3.6
19
77
16
79
66
0
0
33
0.92
6195--6254
8
7.6
8
73
17
54
70
0
0
30
0.88
6179--6271
38
2.5
38
84
11
129
64
0
0
35
0.94
6182--6251
19
3.7
19
78
16
74
67
0
0
32
0.91
6183--6257
16
4.6
16
71
25
59
66
0
0
33
0.92
6183--6251
21
3.5
20
74
20
74
66
0
0
33
0.92
6197--6262
21
3.3
21
71
18
68
68
0
0
31
0.90
6452--6505
27
2.0
28
85
10
76
29
1
0
68
1.00
6452--6519
10
6.9
10
72
24
56
30
1
0
67
0.99
6477--6534
22
2.6
22
86
5
73
36
0
0
63
0.94
7935--8039
33
3.2
33
81
9
110
57
0
1
40
1.16
8424--8466
22
2.0
22
85
0
59
11
9
6
72
1.29
8446--8482
17
2.2
17
90
0
56
13
10
5
70
1.32
8721--8761
2
20.5
2
100
0
82
51
0
0
48
1.00
10817--10866
25
2.0
24
88
3
73
62
0
2
36
1.07
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11077--11143
13
5.2
13
72
13
66
35
1
0
62
1.04
11075--11144
24
2.7
26
85
10
99
37
1
0
61
1.05
11623--11697
18
4.3
16
72
24
55
38
1
0
60
1.06
11610--11723
52
2.2
53
83
11
141
42
0
0
57
1.05
11715--11769
20
2.9
20
81
10
71
56
0
0
43
0.99
12747--12794
3
16.0
3
77
0
51
29
35
0
35
1.58

Tables:   1

The End!