Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1280
Parameters: 2 7 7 80 10 50 1000
Length:  25365

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
71--98
13
2.2
13
100
0
56
28
14
17
39
1.89
51--117
33
2.0
33
91
0
107
25
14
14
44
1.84
3382--3502
52
2.3
52
97
0
224
28
18
18
34
1.94
3382--3522
52
2.7
51
90
4
212
30
17
18
33
1.94
3511--3535
13
1.9
13
100
0
50
36
16
16
32
1.90
3599--3623
13
1.9
13
100
0
50
32
16
16
36
1.90
3578--3643
32
2.0
33
88
2
98
39
13
12
34
1.82
6204--6272
27
2.5
27
86
6
86
26
30
20
23
1.98
6259--6425
52
3.2
52
79
8
187
28
25
13
32
1.94
6091--6425
104
3.2
103
71
12
284
29
25
12
31
1.93
6089--6503
212
2.0
212
85
4
577
28
27
13
30
1.94
6443--6676
79
2.9
80
77
5
199
27
28
13
31
1.94
7623--25363
508
35.1
508
95
1
30361
28
19
24
28
1.99

Tables:   1

The End!