Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1282
Parameters: 2 7 7 80 10 50 1000
Length:  23362

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
543--585
14
3.1
14
74
12
52
53
0
0
46
1.00
1150--1199
22
2.2
23
79
13
59
52
0
0
48
1.00
2347--2393
23
2.0
23
83
0
58
51
0
2
46
1.13
2980--3028
25
2.0
25
84
8
64
48
4
0
46
1.20
3010--3111
47
2.2
48
79
15
115
54
2
1
40
1.26
3039--3083
19
2.4
19
85
7
56
55
2
4
37
1.32
3352--3401
26
1.9
26
84
8
66
36
0
2
62
1.07
3607--3641
9
3.9
9
84
0
52
68
0
0
31
0.90
3581--3642
18
3.2
18
84
11
70
69
0
1
29
0.98
3572--3641
15
4.4
16
70
18
56
68
1
1
28
1.06
3924--3956
15
2.2
15
100
0
66
24
0
0
75
0.80
4054--4086
2
16.5
2
100
0
66
51
0
0
48
1.00
4791--4816
7
3.7
7
100
0
52
53
0
0
46
1.00
5222--5266
22
2.1
21
87
4
63
62
0
2
35
1.08
5468--5527
20
3.2
20
75
20
65
51
1
3
43
1.28
6378--6421
19
2.3
19
84
11
54
56
0
0
43
0.99
6402--6449
13
3.8
13
80
2
53
62
0
2
35
1.07
6682--6716
16
2.2
16
94
0
61
42
5
17
34
1.73
7710--7749
18
2.1
20
86
9
57
40
0
10
50
1.36
8008--8043
19
1.9
18
88
5
54
41
2
5
50
1.40
9167--9225
29
2.0
31
83
6
77
50
1
5
42
1.34
10723--10753
2
15.0
2
93
6
53
48
0
3
48
1.17
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11737--11800
13
5.0
13
69
17
53
60
0
1
37
1.06
11748--11800
14
3.6
14
76
5
52
62
0
1
35
1.06
12459--12491
2
16.5
2
100
0
66
48
0
0
51
1.00
12849--12882
17
2.0
17
88
0
50
20
0
8
70
1.13
17403--17460
17
3.4
17
77
15
57
62
1
0
36
1.06
21453--21503
23
2.1
25
82
7
61
50
5
1
41
1.37
23298--23339
21
2.0
21
95
0
75
19
21
33
26
1.97

Tables:   1

The End!