Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1287
Parameters: 2 7 7 80 10 50 1000
Length:  25313

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39--85
15
3.1
15
84
9
51
40
2
0
57
1.11
193--255
22
3.1
21
80
8
60
60
0
0
39
0.97
939--983
12
3.8
12
82
8
56
35
0
0
64
0.94
962--1038
26
2.8
29
74
20
76
45
0
0
54
0.99
989--1041
14
3.7
14
74
20
56
50
0
0
49
1.00
971--1038
28
2.5
27
83
11
86
48
0
0
51
1.00
1194--1233
13
3.2
13
86
6
57
75
0
0
25
0.81
2837--2878
2
21.0
2
100
0
84
50
0
0
50
1.00
4590--4659
34
2.1
34
100
0
140
41
8
11
38
1.72
11278--11366
15
5.8
15
75
10
81
41
1
1
56
1.14
11282--11334
16
3.4
16
85
10
65
43
0
0
56
0.99
12262--12396
72
1.9
72
85
3
191
48
8
5
36
1.59
14138--14177
2
20.0
2
100
0
80
50
0
0
50
1.00
16864--16900
3
12.3
3
100
0
74
0
32
0
67
0.91
18944--18974
16
1.9
16
93
0
53
32
0
0
67
0.91
22636--22660
13
1.9
13
100
0
50
80
0
16
4
0.87

Tables:   1

The End!