Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1288
Parameters: 2 7 7 80 10 50 1000
Length:  32911

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41--85
11
4.0
11
85
2
63
2
0
13
84
0.72
3368--3444
28
2.8
28
86
7
97
49
23
5
22
1.70
7916--7961
24
1.9
24
90
0
74
43
28
6
21
1.77
7942--8020
28
2.9
28
83
3
90
53
18
2
25
1.58
8583--8621
2
19.5
2
100
0
78
51
0
0
48
1.00
12085--12128
9
4.9
9
83
10
63
45
0
2
52
1.13
12083--12137
27
2.0
27
96
0
101
45
0
3
50
1.19
13062--13100
12
3.1
13
85
14
55
69
0
2
28
1.02
13134--13199
34
2.0
34
82
14
84
34
3
7
54
1.44
14035--14142
38
2.9
38
74
14
98
40
19
12
26
1.88
14060--14142
37
2.2
38
81
14
93
38
18
15
27
1.91
16576--16626
14
3.7
14
81
2
59
45
0
0
54
0.99
18476--18515
18
2.2
19
86
4
55
22
37
0
40
1.54
19804--19833
7
4.3
7
100
0
60
53
30
0
16
1.44

Tables:   1

The End!