Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1290
Parameters: 2 7 7 80 10 50 1000
Length:  20001

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1552--1595
23
1.9
23
85
0
61
43
4
2
50
1.35
2807--2839
5
6.6
5
92
0
57
0
54
3
42
1.15
7440--7513
28
2.6
28
91
0
130
32
20
10
36
1.87
9873--9913
21
2.0
21
90
9
66
41
0
0
58
0.98
11452--11477
13
2.0
13
100
0
52
30
15
15
38
1.88
11516--11591
21
3.7
21
80
3
100
28
17
11
42
1.84
11537--11609
20
3.6
20
81
3
101
31
19
13
35
1.91
11516--11609
41
2.3
41
98
0
179
29
18
12
39
1.88
14048--14112
13
5.0
13
94
0
112
35
15
18
30
1.92
14048--14111
26
2.5
26
100
0
128
34
15
18
31
1.93
14098--14176
20
3.7
20
75
18
70
45
15
13
25
1.83
16191--16221
15
2.1
15
93
0
53
12
22
16
48
1.80
18017--18061
21
2.2
21
84
7
58
24
22
4
48
1.68

Tables:   1

The End!