Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1291
Parameters: 2 7 7 80 10 50 1000
Length:  8821

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1824--1860
9
4.4
9
80
19
53
32
56
10
0
1.34
1825--1853
15
1.9
15
100
0
58
34
55
10
0
1.34
1768--2054
72
4.0
72
81
6
312
27
51
9
11
1.68
1878--1927
21
2.4
21
79
0
55
30
58
8
4
1.45
1768--1971
69
2.9
70
88
3
286
26
51
9
11
1.69
1785--1998
69
3.1
68
79
9
182
27
52
8
11
1.66
1798--2046
75
3.4
75
80
5
219
27
52
8
11
1.66
7454--7529
14
5.6
14
71
17
54
69
0
1
28
0.96
7464--7527
20
3.1
20
71
13
58
71
0
1
26
0.94
7704--7750
25
1.9
25
86
4
69
46
0
0
53
1.00
8214--8252
17
2.3
17
81
0
51
41
0
0
58
0.98
8267--8298
17
1.9
16
93
6
55
50
0
0
50
1.00
8264--8320
24
2.4
22
75
18
53
45
0
1
52
1.11
8504--8571
27
2.5
26
80
17
77
38
0
0
61
0.96

Tables:   1

The End!