Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1295
Parameters: 2 7 7 80 10 50 1000
Length:  36008

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
368--412
15
2.8
17
74
16
51
37
0
6
55
1.26
547--689
70
2.0
70
91
0
232
55
9
12
22
1.66
879--922
2
22.5
2
95
4
81
47
0
0
52
1.00
2791--2844
27
2.1
26
86
13
76
35
11
18
35
1.86
3648--3694
24
2.0
24
83
8
60
46
17
10
25
1.79
4508--4532
2
12.5
2
100
0
50
48
0
52
0
1.00
6308--6375
6
11.0
6
76
10
57
42
0
0
57
0.98
6299--6375
18
4.1
18
71
17
50
44
1
0
54
1.08
6317--6378
30
2.1
30
84
6
81
45
0
0
54
0.99
6292--6379
7
12.4
7
74
19
51
42
1
0
56
1.06
6309--6379
24
2.9
25
76
12
76
42
0
0
57
0.98
9830--9871
17
2.3
17
88
12
57
50
0
0
50
1.00
9825--9872
21
2.4
21
80
16
57
52
0
0
47
1.00
10409--10455
16
2.7
18
77
9
62
34
0
2
63
1.06
10824--10874
10
5.0
10
80
4
66
41
9
7
41
1.67
10865--10892
14
2.0
14
100
0
56
42
21
7
28
1.79
11987--12018
3
10.7
3
100
0
64
68
0
0
31
0.90
23015--23051
2
18.5
2
100
0
74
48
0
0
51
1.00
23349--23411
21
3.1
20
82
13
67
34
1
6
57
1.34
23406--23491
29
3.0
28
71
6
82
44
0
2
53
1.13
23510--23551
22
1.9
22
85
9
59
45
7
0
47
1.30
23641--23704
20
3.0
21
77
9
67
46
1
0
51
1.10

Tables:   1

The End!