Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1301
Parameters: 2 7 7 80 10 50 1000
Length:  22223

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1105--1141
14
2.5
15
83
16
51
40
0
0
59
0.97
1780--1804
13
1.9
13
100
0
50
44
0
0
56
0.99
1777--1833
20
2.7
20
78
8
60
40
1
0
57
1.09
2671--2704
16
2.1
16
88
0
50
29
2
0
67
1.05
4112--4159
19
2.6
18
76
3
51
64
2
0
33
1.05
4674--4706
2
16.5
2
100
0
66
51
0
0
48
1.00
5880--5921
21
2.0
21
81
9
50
50
0
4
45
1.23
12355--12394
19
2.1
19
90
0
62
52
10
17
20
1.72
17174--17251
10
8.0
10
73
15
56
33
0
1
65
1.01
17296--17331
19
1.9
19
88
5
56
30
0
2
66
1.06
18450--18489
6
6.8
6
83
16
57
72
0
0
27
0.85
18448--18488
13
3.4
13
87
12
61
73
0
0
26
0.84
18995--19037
20
2.2
20
84
12
54
60
0
2
37
1.10
19487--19526
20
2.1
19
95
4
71
40
0
0
60
0.97
19810--19848
20
1.9
21
85
15
55
56
0
0
43
0.99
19815--19849
17
2.1
16
89
10
52
57
0
0
42
0.99
19981--20019
13
3.1
13
88
3
53
51
0
0
48
1.00
20925--20955
15
2.1
15
93
0
53
35
0
6
58
1.24
20978--21013
13
2.9
12
84
8
54
61
0
0
38
0.96
21054--21090
17
2.2
17
90
4
58
70
2
0
27
1.01
21237--21278
3
14.0
3
94
0
75
64
0
0
35
0.94
21549--21607
14
4.1
14
75
14
50
54
0
0
45
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21559--21607
15
3.3
15
76
18
50
55
0
0
44
0.99

Tables:   1

The End!