Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1303
Parameters: 2 7 7 80 10 50 1000
Length:  33999

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2888--2954
32
2.1
32
83
8
84
26
14
5
52
1.65
4874--4938
23
2.8
23
88
2
85
67
4
13
13
1.38
4896--4951
23
2.4
23
81
3
67
71
7
8
12
1.30
6214--6593
152
2.5
151
81
2
397
31
16
15
36
1.90
6214--6594
151
2.5
151
82
3
417
31
16
15
36
1.90
7270--7629
148
2.4
148
81
6
413
31
17
14
36
1.90
7218--8075
151
5.6
152
72
13
566
30
16
14
37
1.89
7406--8360
466
2.1
465
81
5
1119
30
16
14
38
1.89
8829--9859
158
6.7
157
71
14
530
30
18
14
36
1.90
8404--9966
466
3.4
459
79
7
1524
30
18
14
36
1.90
13009--13282
77
3.5
79
80
10
276
29
24
11
33
1.90
14054--14092
19
2.0
20
85
5
53
35
25
15
23
1.94
16804--18160
620
2.2
619
78
8
1353
35
13
18
31
1.90
19654--19679
13
2.0
13
100
0
52
38
0
0
61
0.96
19880--19940
22
2.7
22
78
16
72
54
1
0
44
1.10
24631--24659
15
2.0
15
93
6
51
17
20
13
48
1.81
30966--31016
18
2.9
18
80
11
54
58
0
0
41
0.98
32395--32435
14
2.9
15
75
10
50
48
0
4
46
1.23
32975--33018
22
2.0
22
86
8
63
47
0
0
52
1.00

Tables:   1

The End!