Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1306
Parameters: 2 7 7 80 10 50 1000
Length:  24539

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1600--2134
32
17.2
32
93
4
877
16
18
34
30
1.93
2078--3211
27
42.0
27
95
3
1950
26
15
35
22
1.94
10432--10481
23
2.3
23
82
6
59
54
6
2
38
1.37
11008--11044
18
2.1
17
90
5
56
0
16
0
83
0.64
11020--11045
13
2.0
13
100
0
52
0
23
0
76
0.78
16650--16998
43
7.9
43
82
9
398
31
18
24
25
1.97
16592--17011
92
4.7
90
81
9
441
34
17
23
24
1.96
16650--17011
134
2.7
135
91
2
579
32
18
24
24
1.97
16691--17003
91
3.5
92
82
9
339
31
17
24
25
1.97
16913--16980
21
3.2
21
63
19
50
32
17
25
25
1.97
17060--17261
58
3.5
58
81
4
257
21
18
31
28
1.97
17060--17257
29
6.9
29
84
5
233
21
18
31
28
1.97
18515--18560
15
3.2
14
77
22
51
0
0
13
86
0.56
18515--18560
22
2.1
22
88
4
67
0
0
13
86
0.56
18517--18559
18
2.3
18
84
11
52
0
0
13
86
0.58

Tables:   1

The End!