Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1308
Parameters: 2 7 7 80 10 50 1000
Length:  33809

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3399--3474
38
2.0
38
87
5
109
50
15
11
22
1.77
5627--5741
56
2.0
58
93
3
198
49
19
19
12
1.78
6546--6579
14
2.4
14
86
13
52
67
0
32
0
0.91
7114--7152
20
2.0
20
85
10
53
66
0
0
33
0.92
7215--7250
17
2.0
19
89
10
58
66
0
0
33
0.92
7214--7266
27
1.9
28
84
3
72
58
1
0
39
1.09
7775--7842
10
7.1
10
72
12
54
36
0
0
63
0.95
7774--7831
27
2.1
26
87
9
80
39
0
0
60
0.97
7781--7849
8
9.1
8
71
21
51
37
0
0
62
0.96
7773--7852
37
2.3
35
87
10
112
38
0
0
61
0.96
7774--7853
27
2.9
28
81
9
76
37
0
0
62
0.95
8389--8413
4
6.2
4
100
0
50
48
0
28
24
1.52
13083--13119
2
18.5
2
94
0
65
0
45
0
54
1.00
18290--18338
25
2.0
23
85
14
64
44
0
2
53
1.12
18253--18330
38
2.1
36
84
11
97
50
2
2
44
1.29
18315--18432
47
2.5
46
75
20
109
47
1
0
50
1.17
18911--18938
12
2.3
12
100
0
56
25
0
0
75
0.81
18923--19019
24
4.1
24
74
12
76
43
0
0
56
0.99
18899--18984
12
7.4
12
73
21
51
38
0
1
60
1.04
18940--18989
22
2.3
22
86
6
66
46
0
0
54
1.00
18955--19026
36
2.0
36
81
10
85
52
0
0
47
1.00
18938--19034
52
2.0
51
82
15
125
51
0
0
48
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
22541--22576
11
3.4
11
88
7
56
50
0
0
50
1.00
22823--22847
13
1.9
13
100
0
50
16
8
8
68
1.38
25295--25391
46
2.2
42
78
18
126
45
7
5
42
1.54
25444--25474
2
15.5
2
100
0
62
48
0
0
51
1.00
25947--25994
17
3.1
16
83
16
66
45
2
0
52
1.12
29576--29698
23
5.6
23
66
26
54
38
0
4
57
1.18
29576--29654
32
2.4
33
81
14
92
41
0
1
56
1.07
29664--29709
18
2.6
17
79
6
56
34
0
2
63
1.07
29664--29708
23
2.0
23
86
0
63
33
0
2
64
1.06
30344--30377
16
2.1
16
100
0
68
14
23
23
38
1.92

Tables:   1

The End!