Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1320
Parameters: 2 7 7 80 10 50 1000
Length:  22192

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3--59
19
2.9
19
80
15
62
33
17
17
31
1.93
44--70
13
2.1
13
100
0
54
40
14
14
29
1.86
5462--5644
97
1.9
97
87
2
269
28
25
10
34
1.89
5447--5701
97
2.6
95
80
7
257
28
26
11
34
1.91
7681--7722
16
2.4
17
84
11
50
42
2
2
52
1.27
13972--14020
14
3.5
13
78
10
53
85
10
0
4
0.71
13961--14020
25
2.4
25
86
10
79
83
10
0
6
0.81
13965--14020
26
2.2
26
87
12
80
83
8
0
7
0.80
13972--14026
26
2.2
25
83
9
67
83
9
3
3
0.88
15237--15788
65
8.5
64
74
7
362
18
21
14
44
1.86
15314--15786
130
3.6
131
77
8
423
18
21
14
44
1.86
19130--19252
53
2.3
53
91
1
203
26
18
18
36
1.94
19130--19273
52
2.7
53
87
5
177
29
18
17
35
1.93
19304--19400
19
5.8
18
67
27
70
38
16
10
35
1.83
19296--19398
32
3.2
32
91
0
170
36
17
10
34
1.85
21041--21135
10
9.1
10
69
8
55
38
7
25
28
1.82
21029--21127
32
3.1
32
91
0
162
37
8
24
30
1.84
21297--21359
21
3.0
21
81
6
65
41
7
6
44
1.59

Tables:   1

The End!