Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1324
Parameters: 2 7 7 80 10 50 1000
Length:  71275

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6426--6700
51
5.3
51
75
10
279
32
14
26
27
1.94
6525--6595
28
2.5
28
82
11
92
28
16
30
23
1.97
6632--6779
79
1.9
79
92
0
251
29
16
28
26
1.97
6711--6828
51
2.3
51
92
0
200
30
14
27
27
1.95
6574--6991
130
3.2
130
94
0
728
31
13
27
27
1.94
6762--6907
79
1.8
79
91
0
238
30
14
28
27
1.95
6841--6960
51
2.4
51
91
0
195
29
15
28
26
1.96
6944--7019
28
2.7
29
85
4
102
23
14
32
28
1.94
7001--7118
51
2.3
51
89
4
184
28
11
28
30
1.92
7054--7352
79
3.8
79
85
2
390
31
13
25
28
1.94
10006--10150
72
2.0
72
100
0
290
36
13
9
40
1.78
22828--22885
19
3.0
19
87
2
80
31
20
12
36
1.89
22925--22954
13
2.3
13
94
0
51
36
16
13
33
1.88
22910--22974
33
2.0
32
85
11
87
33
13
20
32
1.91
33904--33948
20
2.2
20
84
7
56
22
15
11
51
1.75
40564--40774
106
2.0
106
85
3
282
44
16
13
25
1.84
41723--41767
20
2.3
19
88
7
63
8
8
2
80
1.00
47591--47625
18
2.0
18
88
5
54
34
14
5
45
1.68
47615--47664
20
2.6
19
81
6
55
46
16
12
26
1.81
50233--50297
19
3.7
19
71
23
70
40
10
10
38
1.75
50233--50304
32
2.2
32
92
0
108
37
11
11
40
1.76
56993--57106
48
2.4
48
90
0
183
28
34
7
29
1.85
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58744--58820
20
3.8
20
83
6
93
31
14
12
41
1.83

Tables:   1

The End!