Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1326
Parameters: 2 7 7 80 10 50 1000
Length:  35101

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18--75
13
3.9
13
73
26
53
32
13
13
39
1.85
31--95
20
3.6
20
73
26
81
29
12
12
46
1.78
17--100
33
2.5
33
100
0
168
30
11
13
44
1.79
140--164
13
1.9
13
100
0
50
32
16
16
36
1.90
173--301
52
2.5
52
92
0
213
37
17
15
30
1.90
7734--7775
22
2.0
22
86
9
61
38
2
2
57
1.25
9587--9633
4
11.8
4
82
8
60
0
27
23
48
1.51
12276--12323
2
24.0
2
100
0
96
50
0
0
50
1.00
13162--13232
16
4.5
16
76
15
67
57
0
0
42
0.98
13185--13228
20
2.1
21
83
4
54
63
0
0
36
0.95
13162--13232
31
2.3
31
83
11
83
57
0
0
42
0.98
13170--13247
16
4.6
16
79
8
57
56
0
2
41
1.13
13370--13414
20
2.2
20
84
4
54
33
6
4
55
1.46
16058--16092
6
5.8
6
86
0
52
54
0
45
0
0.99
18019--18049
2
16.0
2
93
6
55
48
0
0
51
1.00
19684--19717
16
2.2
16
89
5
52
55
2
0
41
1.15
22725--22749
4
6.2
4
100
0
50
52
0
0
48
1.00
23417--23470
26
2.0
27
89
3
83
53
7
1
37
1.40
24570--24635
33
2.0
35
85
8
93
53
3
0
43
1.16
24579--24646
17
4.1
17
74
22
56
57
1
0
41
1.08
25780--25858
38
2.1
38
95
0
140
22
13
18
44
1.86

Tables:   1

The End!