Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1329
Parameters: 2 7 7 80 10 50 1000
Length:  38386

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
897--928
16
2.1
16
94
5
57
40
0
0
59
0.97
1247--1323
36
2.2
36
90
2
120
41
3
2
51
1.34
1842--1866
2
12.5
2
100
0
50
52
0
0
48
1.00
4317--4383
33
2.0
33
100
0
134
43
23
17
14
1.87
6479--6508
13
2.3
13
94
0
51
33
16
10
40
1.82
8387--8554
51
3.3
51
78
5
194
33
11
26
28
1.91
8530--8586
28
1.9
28
86
10
78
28
14
31
26
1.94
11062--11123
32
1.9
32
86
0
88
43
17
12
25
1.85
11143--11210
19
3.9
18
76
23
83
38
14
11
35
1.83
11165--11189
13
1.9
13
100
0
50
32
16
16
36
1.90
11146--11208
32
2.0
32
96
0
117
36
15
12
34
1.86
11246--11323
21
3.8
21
86
8
115
32
12
16
38
1.87
11246--11327
41
2.0
40
88
6
121
32
12
17
37
1.86
11804--12552
55
13.5
54
87
6
988
21
20
29
28
1.98
11838--12552
331
2.1
332
92
3
1170
20
21
30
27
1.98
13534--13580
12
3.8
12
80
5
58
0
6
8
85
0.75
13531--13588
13
4.6
13
77
12
50
0
12
6
81
0.88
27610--27685
36
2.1
35
87
4
107
42
3
2
51
1.34
28211--28237
2
13.5
2
100
0
54
51
0
0
48
1.00
30050--30116
33
2.0
33
100
0
134
43
23
17
14
1.87
32212--32241
13
2.3
13
94
0
51
33
16
10
40
1.82
34498--34523
13
2.0
13
100
0
52
30
15
15
38
1.88
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35222--35265
21
2.1
21
83
8
54
25
31
4
38
1.76
35193--35449
86
3.0
86
96
0
487
30
26
5
38
1.78
35308--35351
21
2.1
21
83
8
54
25
31
4
38
1.76
35394--35437
21
2.1
21
83
8
54
25
31
4
38
1.76
37249--37286
13
2.9
13
92
0
67
36
13
15
34
1.87

Tables:   1

The End!