Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1330
Parameters: 2 7 7 80 10 50 1000
Length:  35921

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3870--4058
104
1.8
103
84
5
256
28
19
12
39
1.88
13059--13117
22
2.6
22
77
17
68
32
20
11
35
1.89
17170--17342
78
2.2
78
86
0
238
28
13
19
38
1.90
17304--17461
79
2.0
79
90
2
246
33
13
14
37
1.86
18272--18344
20
3.7
19
81
7
76
39
13
16
30
1.87
18272--18325
19
2.8
20
82
2
74
38
12
16
31
1.87
18903--18936
17
2.0
17
100
0
68
52
5
0
41
1.25
18910--18962
26
2.0
26
96
0
97
54
5
0
39
1.24
20797--20836
13
3.1
13
81
0
53
37
10
15
37
1.80
21255--21279
13
1.9
13
100
0
50
32
16
16
36
1.90
21267--21319
21
2.6
21
78
3
63
41
15
13
30
1.85
28378--28506
52
2.5
52
94
0
231
27
17
18
36
1.93
28515--28573
13
4.9
13
73
26
67
35
13
16
33
1.88
28515--28594
34
2.4
34
100
0
160
35
12
17
35
1.88
28628--28690
19
3.6
19
68
24
57
38
19
11
31
1.86
28618--28688
32
2.2
32
89
0
106
36
19
11
32
1.87
30026--30116
33
2.8
33
88
6
114
31
17
14
36
1.90
30044--30123
33
2.4
33
91
0
133
33
17
15
33
1.91
30156--30207
19
2.7
20
81
6
61
44
13
11
30
1.79
31726--31795
8
8.5
8
78
12
70
78
1
4
15
0.98
31816--31847
13
2.5
13
94
0
55
46
0
12
40
1.42
34099--34137
11
3.5
11
86
13
53
7
15
7
69
1.35
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34449--34484
17
2.1
18
94
5
65
22
13
16
47
1.82
34779--35046
59
4.5
60
75
14
225
25
11
12
50
1.73

Tables:   1

The End!