Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1332
Parameters: 2 7 7 80 10 50 1000
Length:  16007

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
271--308
17
2.2
17
100
0
76
28
23
26
21
1.99
2943--2991
24
2.0
24
96
0
89
48
4
10
36
1.56
3353--3386
2
17.0
2
100
0
68
0
50
0
50
1.00
5022--5066
23
1.9
23
81
4
54
31
0
6
62
1.21
5782--5815
14
2.4
14
90
0
50
35
0
0
64
0.94
6195--6244
24
2.1
24
81
7
57
52
0
8
40
1.31
6205--6254
24
2.1
24
85
3
66
52
0
2
46
1.12
6816--6881
14
5.0
13
75
10
53
65
1
0
33
1.02
6826--6866
14
2.9
14
88
3
55
58
2
0
39
1.11
6869--6900
15
2.2
14
94
5
55
62
0
0
37
0.95
7475--7529
20
2.6
21
85
5
67
65
0
0
34
0.93
7499--7533
15
2.2
16
90
5
54
62
0
0
37
0.95
7484--7552
34
2.1
32
86
8
93
59
1
0
39
1.06
8196--8239
19
2.3
19
80
0
52
50
0
0
50
1.00
8236--8273
17
2.2
18
86
9
53
39
2
0
57
1.12
12665--12703
6
6.3
6
88
5
60
0
17
0
82
0.68
12663--12701
13
3.1
13
88
7
62
0
17
0
82
0.68
12951--13004
14
3.9
14
76
13
58
22
0
5
72
1.05
12955--13013
28
2.1
28
81
6
66
23
0
5
71
1.06
12951--13050
38
2.7
35
78
12
83
27
0
5
68
1.10
13648--13692
19
2.3
20
85
11
67
33
0
2
64
1.06
13690--13771
38
2.2
38
82
12
98
47
0
1
51
1.08

Tables:   1

The End!