Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1343
Parameters: 2 7 7 80 10 50 1000
Length:  19661

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
311--348
2
19.0
2
100
0
76
50
0
0
50
1.00
2741--2774
18
1.9
18
88
5
52
61
0
2
35
1.11
2914--2943
11
2.7
11
89
0
51
30
0
0
70
0.88
5624--5692
30
2.4
30
80
17
85
69
2
15
11
1.30
5624--5707
27
3.0
26
71
20
64
70
2
16
10
1.26
5637--5705
30
2.3
29
79
16
72
71
1
17
10
1.21
7502--7533
2
16.0
2
100
0
64
50
0
0
50
1.00
8460--8490
14
2.2
14
94
0
53
29
3
19
48
1.64
11644--11668
2
12.5
2
100
0
50
0
52
0
48
1.00
13678--13711
14
2.4
14
90
9
52
47
0
0
52
1.00
13875--13915
21
2.0
21
85
9
57
43
0
0
56
0.99
14305--14361
28
2.0
28
96
0
105
36
0
1
61
1.07
14816--14846
2
15.5
2
100
0
62
48
0
0
51
1.00
15932--16025
42
2.3
42
80
14
106
45
1
0
53
1.07
16806--16835
10
2.8
11
95
5
53
56
0
10
33
1.32
18579--18616
6
6.5
6
84
6
51
13
5
0
81
0.85
19354--19590
113
2.1
115
88
6
349
41
4
2
52
1.33
19547--19606
29
2.1
29
83
0
75
43
3
1
51
1.28
19333--19609
113
2.4
112
83
8
312
41
3
1
53
1.29

Tables:   1

The End!