Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1344
Parameters: 2 7 7 80 10 50 1000
Length:  50373

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
394--426
15
2.1
16
88
5
50
12
21
9
57
1.62
6516--6634
42
2.8
42
92
0
193
8
46
2
42
1.47
6549--6624
12
6.9
11
75
15
52
9
48
2
39
1.49
6540--6625
24
3.8
24
72
17
85
10
45
2
41
1.51
6531--6601
18
3.6
18
69
20
52
9
43
2
43
1.52
9905--9980
12
6.9
11
75
15
52
39
2
48
9
1.49
9904--9989
24
3.8
24
72
17
85
41
2
45
10
1.51
9904--10013
42
2.6
42
92
2
177
40
2
47
10
1.51
15585--15628
22
2.0
22
100
0
88
27
4
22
45
1.72
17393--17437
12
3.8
12
88
8
65
37
0
51
11
1.38
17383--17513
42
3.0
42
79
3
145
41
0
45
12
1.43
17393--17477
12
7.6
11
75
18
61
37
0
47
15
1.46
22374--22529
64
2.4
64
97
0
294
30
21
19
28
1.98
40179--40617
223
2.0
219
89
3
666
28
17
22
31
1.97
45899--45959
9
7.1
9
78
10
74
13
42
0
44
1.43
45886--45956
18
3.6
18
72
20
61
12
42
0
45
1.42
45870--45978
42
2.6
42
89
0
155
12
43
0
43
1.49
45894--45978
24
3.8
24
74
17
83
14
41
0
44
1.45

Tables:   1

The End!