Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: Scaffold1347
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 26349
ACGTcount: A:0.36, C:0.15, G:0.19, T:0.30
Found at i:5401 original size:159 final size:158
Alignment explanation
Indices: 4800--5405 Score: 376
Period size: 159 Copynumber: 3.8 Consensus size: 158
4790 CCCCAAACGT
* * * *
4800 GGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGG-GCAAAGAAAAGATTTTCA
1 GGCTTGCCTTATTTAAGAGACGAACTTTGATTTTAAGCAAAATAGGTGCAAAGAAAAGATTTTCA
* * * * ** * *
4864 TGCAAAAGAAAATCATCAATATCATTTATCCTATTGAGGAGAATGTGTTTATAGTGTCTAATGAC
66 TGCAAAACAAAAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCAT
* *
4929 CAAAAGAATGAATAT-CATTACAAGAATCCA
131 CAAAAGAATGGAGATGC--TACAAGAAT-CA
* * * * * ** * * * * **
4959 TGTTTGTCTCATTTGAGTCACGAACTTAGACTTT-A-CAAAATTGGTAG-GAA-AAAAGCCTTTC
1 GGCTTGCCTTATTTAAGAGACGAACTTTGATTTTAAGCAAAATAGGT-GCAAAGAAAAGATTTTC
* * * * * * ** * * *
5020 CTGCGAAACCAAAGCGTCAATATGATGTATCCTAATGAGGAGACTACG-TTATGGTGCCTAATCC
65 ATGCAAAACAAAAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCA
* * ** *
5084 TGAAAAGAATGGGGATTAGCT-TGAGTATTCA
130 TCAAAAGAATGGAGA-T-GCTACAAG-AATCA
* * * * * ** * * * *
5115 TGTTTGTCGTATTTAAGAGACAAACTTTGATTTTATCCAAAA-CGGTGGAAAGAAAAGCTTTTCT
1 GGCTTGCCTTATTTAAGAGACGAACTTTGATTTTAAGCAAAATAGGTGCAAAGAAAAGATTTTCA
* * * * * * * * *
5179 TACGACACCAAAGCATCAATATCATGCATCCTAATGAAGG-GAATGTATTT-TGGCATCCAAATC
66 TGCAAAACAAAAGCATCAATATCATGTATCCTAATG-AGGAGAATGTGTTTATAGTA-CCTAATC
*
5242 ATTAAAAGAATGGAGACTGCTACAAGAATCGA
129 ATCAAAAGAATGGAGA-TGCTACAAGAATC-A
* *
5274 GGCTTGCCTTATTTAA-AGGATGAACTTTGATTTTAAGGAAAATAGG-GCAAAGAAAAGATTTTC
1 GGCTTGCCTTATTTAAGA-GACGAACTTTGATTTTAAGCAAAATAGGTGCAAAGAAAAGATTTTC
* * * *
5337 ATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCA
65 ATGCAAAACAAAAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCA
5402 -CAAA
130 TCAAA
5406 TGAACGAAGA
Statistics
Matches: 329, Mismatches: 99, Indels: 39
0.70 0.21 0.08
Matches are distributed among these distances:
156 53 0.16
157 61 0.19
158 67 0.20
159 143 0.43
160 5 0.02
ACGTcount: A:0.37, C:0.15, G:0.19, T:0.30
Consensus pattern (158 bp):
GGCTTGCCTTATTTAAGAGACGAACTTTGATTTTAAGCAAAATAGGTGCAAAGAAAAGATTTTCA
TGCAAAACAAAAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCAT
CAAAAGAATGGAGATGCTACAAGAATCA
Found at i:7780 original size:395 final size:395
Alignment explanation
Indices: 7011--7786 Score: 1171
Period size: 395 Copynumber: 2.0 Consensus size: 395
7001 CAAGAATCGA
* *
7011 GGCTTGCCTTATTTAAAATATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
1 GGCTTGCCTTATTTAAAAGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
* *
7076 GCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
66 GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
* * * *
7141 AAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAG
131 AAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC
* * * * *
7206 AAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCTATTCAAATGAG
196 AAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGAG
* * *
7271 AAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTC
261 AAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTC
7336 ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
326 ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
7401 AACGT
391 AACGT
**
7406 GGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
1 GGCTTGCCTTATTTAAAAGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
* * ** *
7471 GCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTTATAGTGTCTAATGACC
66 GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCA-C
* * *
7536 AAAA-GAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCACGAACTTAGACTTTA
130 AAAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTA
* * * *
7600 CAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATATGATGTATCCTAATGA
195 CAAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGA
* **
7665 GGAGACTACG-TTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCT-TGAGTATTCATGTTTG
260 GAAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAG-TATGAGTATTCATGTTTG
* * * *
7728 TCGTATTTAAGAGACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTT
324 TCATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAA-AAAAGCTTTTCTT
7787 ACGACACCAA
Statistics
Matches: 341, Mismatches: 37, Indels: 6
0.89 0.10 0.02
Matches are distributed among these distances:
394 88 0.26
395 248 0.73
396 5 0.01
ACGTcount: A:0.36, C:0.14, G:0.18, T:0.31
Consensus pattern (395 bp):
GGCTTGCCTTATTTAAAAGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
AAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC
AAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGAG
AAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTC
ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
AACGT
Found at i:8651 original size:395 final size:395
Alignment explanation
Indices: 7882--8657 Score: 1171
Period size: 395 Copynumber: 2.0 Consensus size: 395
7872 CAAGAATCGA
*
7882 GGCTTGCCTTATTTAAAGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
1 GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
* *
7947 GCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
66 GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
* * * **
8012 AAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTTG
131 AAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC
* * * * *
8077 AAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCTATTCAAATGAG
196 AAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGAG
* * *
8142 AAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTA
261 AAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTA
8207 ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
326 ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
8272 AACGT
391 AACGT
*
8277 GGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
1 GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
* * ** *
8342 GCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTTATAGTGTCTAATGACC
66 GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCA-C
* * *
8407 AAAA-GAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCACGAACTTAGACTTTA
130 AAAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTA
* * * *
8471 CAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATATGATGTATCCTAATGA
195 CAAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGA
* **
8536 GGAGACTACG-TTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCT-TGAGTATTCATGTTTG
260 GAAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAG-TATGAGTATTCATGTTTG
** * * *
8599 TCGTATTTAAGAGACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTT
324 TAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAA-AAAAGCTTTTCTT
8658 ACGACACCAA
Statistics
Matches: 341, Mismatches: 37, Indels: 6
0.89 0.10 0.02
Matches are distributed among these distances:
394 87 0.26
395 249 0.73
396 5 0.01
ACGTcount: A:0.36, C:0.14, G:0.19, T:0.31
Consensus pattern (395 bp):
GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
AAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC
AAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGAG
AAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTA
ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
AACGT
Found at i:8936 original size:159 final size:158
Alignment explanation
Indices: 8287--8937 Score: 414
Period size: 159 Copynumber: 4.1 Consensus size: 158
8277 GGCTTGCCTT
* * *
8287 ATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGG-GCAAAGAAAAGATTTTCATGCAAAAGAA
1 ATTTAA-GGACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAA
* * * ** *
8351 AATCATCAATATCATATATCCTATTGAGGAGAATGTGTTTATAGTGTCTAATGACCAAAAGAATG
65 AAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACCAAAAGAATG
* *
8416 AATATCATTACAAGAATCCATGTTTGTCTC
130 AAGA-CTTTACAAGAATCCATGTTTGTCTC
* * * * * * ** * *
8446 ATTTGAGTCACGAACTTAGACTTTACA--AAAATTGGTAG-GAA-AAAAGCCTTTCCTGCGAAAC
1 ATTTAAG-GACGAACTTTGATTTTA-AGGAAAATAGGT-GCAAAGAAAAGATTTTCATGCAAAAC
* * * * ** * * *
8507 CAAAGCGTCAATATGATGTATCCTAATGAGGAGACTACG-TTATGGTGCCTAATC-CTGAAAAGA
63 AAAAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCAC-CAAAAGA
** * * *
8570 ATGGGGA--TTAGCTTGAGTATTCATGTTTGTCGT-
127 ATGAAGACTTTA-C--AAGAATCCATGTTTGTC-TC
* *** * * * * * * * *
8603 ATTTAAGAGACAAACTTTGATTTTATCCAAAA-CGGTGGAAAGAAAAGCTTTTCTTACGACACCA
1 ATTTAAG-GACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAA
* * * * **
8667 AAGCATCAATATCATGCATCCTAATGAAGG-GAATGTGTTT-TGGCATCCAAATCATGAAAAGAA
65 AAGCATCAATATCATGTATCCTAATG-AGGAGAATGTGTTTATAGTA-CCTAATCACCAAAAGAA
* * * * * * *
8730 TGGAGACTGCTACAAGAATCGAGGCTTGCCTT
128 TGAAGACT-TTACAAGAATCCATGTTTGTCTC
* *
8762 ATTTAAAGGATGAACTTTGATTTTAAGGAAAATAGG-GCAAAGAAAAGATTTTCATGCAAAATAA
1 ATTT-AAGGACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAA
* * * *
8826 AATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCA-CAAAATGAAC
65 AAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACCAAAA-GAAT
* *
8890 GAAGATCTTTACTAGGATCCATGTTTGTCTC
129 GAAGA-CTTTACAAGAATCCATGTTTGTCTC
*
8921 ATTTGAGGCACGAACTT
1 ATTTAAGG-ACGAACTT
8938 AGACTTTAGA
Statistics
Matches: 366, Mismatches: 98, Indels: 56
0.70 0.19 0.11
Matches are distributed among these distances:
154 3 0.01
155 1 0.00
156 2 0.01
157 60 0.16
158 116 0.32
159 169 0.46
160 12 0.03
161 1 0.00
162 2 0.01
ACGTcount: A:0.37, C:0.15, G:0.19, T:0.29
Consensus pattern (158 bp):
ATTTAAGGACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAAA
AGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACCAAAAGAATGA
AGACTTTACAAGAATCCATGTTTGTCTC
Found at i:9199 original size:870 final size:870
Alignment explanation
Indices: 1654--26349 Score: 47738
Period size: 870 Copynumber: 28.4 Consensus size: 870
1644 TTCAATGTTC
1654 GACAAACTTTGATATTTAT-CAGAAAC-GTGGAAAGAAGAAAAGCTTTTCTTACGACACCAAAGG
1 GACAAACTTTGAT-TTTATCCA-AAACGGTGG--A-AAGAAAAGCTTTTCTTACGACACCAAA-G
*
1717 CAATCAATATAATGCATCCTAATGAAAGGGAATGTGGTTTTTGGCATCCAAATCA-G-AAAGAAT
60 C-ATCAATATCATGCATCCTAATG-AAGGGAATGT-G-TTTTGGCATCCAAATCATGAAAAGAAT
*
1780 GAAGACTGCTACAAGAA-CGAGGCTTATGCC-TATTTAAAGTATGAACTTTGA-TTTAAGGAAAA
121 GGAGACTGCTACAAGAATCGAGGC-T-TGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAA
*
1842 TA-GGC-AAGAAAAGCTTTTCATGCAAAATAAGAAATCATCAATATCAATTTATCCTAATG-GCA
184 TAGGGCAAAGAAAAGATTTTCATGCAAAAT-A-AAATCATCAATATC-ATTTATCCTAATGAGCA
*
1904 GAATGTGTTTATAGTACCT-ATCACAAAATGAACGAAAGATCTTTACT-GAATCCATGTTTGTCT
246 GAATGTGTTTATAGTACCTAATCACAAAATGAACG-AAGATCTTTACTAGGATCCATGTTTGTCT
* * *
1967 C-TTTGCGGCAC-AACTTCTGACTTTAGAAAACTTGGTGGGAAAAATGACCTTTCTTATCTTGC-
310 CATTTGAGGCACGAACTT-AGACTTTAGAAAAATTGGTGGGAAAAATG--C---CTT-TCTTGCA
2029 AAACCAAAAGCATCATTATGAATCTATATCAAATGAGAAGACTAT-TTTAT-GTGTCTAATCTTG
368 AAACC-AAAGCATCATTATG-ATCTAT-TCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTG
*
2092 -AAAGAAC-GGGATTAGTATGA-TATACATGTTTGTAACTA-TTAAGAGAACAAAC-TTGATTCT
430 AAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTAA-TATTTAAGAG-ACAAACTTTGATTCT
* * *
2152 CTC--AAACGGTGC-AAAAAAG-TTTTCTTGC-ACCCAAAACGTGGCCGTGCCTTATTTAAGAGG
493 ATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCAAACGTGG-CTTGCCTTATTTAAG-GG
* * * * *
2212 ATGAACAGTTGATTGTGTAGG-ACATAGGCAAAGACCACCAAAAAAAGATTTTCAAGGCAAAAGA
556 ATGAAC-TTTGATTGT-AAGGAAAATAGG----G--CA--AAGAAAAGATTTTC-ATGCAAAAGA
* *
2276 AAATCATGCAATAGCATTTATCCTATTGAGGAGAATGTGTTTTATACGTGTCTAATGACCAAAAG
610 AAATCAT-CAATATCATATATCCTATTGAGGAGAATGTG-TTTATA-GTGTCTAATGACCAAAAG
2341 -ATGAATATCATTACAA-AATCCATGTTTGTCTCATTTGAGTCACGAA-TTAGACTTTAACAAAA
672 AATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCACGAACTTAGACTTT-ACAAAA
2403 ATTGGTAGG--AAAAGCCTTTCCTGCGAAACCAAAGCGTC-ATATGATGTATCCTAATGAGGAGA
736 ATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATATGATGTATCCTAATGAGGAGA
2465 CTACGTTAT-GTGGCCTAATCCTG-AAAGAATGGGGATTAGCTTGAGTATTCATGTTTGTCGTAT
801 CTACGTTATGGT-GCCTAATCCTGAAAAGAATGGGGATTAGCTTGAGTATTCATGTTTGTCGTAT
2528 TTAAGA
865 TTAAGA
*
2534 GACAAACTTTGATTTTAATCGAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCA
1 GACAAACTTTGATTTT-ATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCA
* *
2599 ATATCATGCATCCTAATGAATGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGATACTGC
65 ATATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGC
* * *
2664 TACAAGAATCGAGGCTTGCCTTATTTAAAATATGAAC-TTGATTTTAAGGAAAATAGCGTAAAGA
130 TACAAGAATCGAGGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGA
2728 AAAGATTTTCATGC-AAATAAAATCATC-A-ATCATTTATCCTAATGAGCAGAATGTGTTTATAG
195 AAAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAG
2790 TACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAA
260 TACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAA
*
2855 CTTTAGACTTTTGAAAAATTGGTGGGAAAAATGCCTTTTCTTGC-AAACCAAAGCATCATTATGA
325 C-TTAGACTTTAGAAAAATTGGTGGGAAAAATGCC-TTTCTTGCAAAACCAAAGCATCATTATGA
2919 TCTATTC-AATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAG
388 TCTATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAG
2983 TATTCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTT
453 TATTCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTT
3048 TTCTTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGG
518 TTCTTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGG
*
3113 GCAAAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTATTGAGGAGAATGTG
583 GCAAAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTG
3178 TTTATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAG
648 TTTATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAG
3243 TCACGAACTTAGACTTTACAAAAATTGGTAGG-AAAAAGCCTTTCCTGCGAAACCAAAGCGTCAA
713 TCACGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAA
3307 TATGATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCT
778 TATGATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCT
3372 TGAGTATTCATGTTTGTCGTATTTAAGA
843 TGAGTATTCATGTTTGTCGTATTTAAGA
3400 GACAAACTTTGATTTTATCCAAAACGGTGG-AAGAGAAAGCTTTTCTTACGACACCAAAGCATCA
1 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGA-AAAGCTTTTCTTACGACACCAAAGCATCA
*
3464 ATATCATGCATCCTAATGAATGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGC
65 ATATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGC
*
3529 TACAAGAATCGAGGCTTGCCTTATTTAAAATATGAACTTTGATTTTAAGGAAAATA-GGCTAAAG
130 TACAAGAATCGAGGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGC-AAAG
3593 -AAAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATA
194 AAAAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATA
3657 GTACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGA
259 GTACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGA
3722 ACTTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGAT
324 ACTTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGAT
3787 CTATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGT
389 CTATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGT
*
3852 ATTCATGTTTGTCATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTT
454 ATTCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTT
*
3917 TCTTGCCACCCCAAACGTGGCTTGCCTTATTTAA-GGATGAACTTTGATTGTAAGGAAAATAGGG
519 TCTTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGG
3981 CAAAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGT
584 CAAAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGT
4046 TTATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGT
649 TTATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGT
4111 CACGAACTTAGACTTTACAAAAATTGGTAGG-AAAAAGCCTTTCCTGCG-AACCAAAGCGTCAAT
714 CACGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAAT
4174 AT-ATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTT
779 ATGATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTT
4238 GAGTATTCATGTTTGTCGTATTTAAGA
844 GAGTATTCATGTTTGTCGTATTTAAGA
4265 GACAAAC-TTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
1 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
* *
4329 TATCATGCATCCTAATGAATGGAATGTATTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
66 TATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
*
4394 ACAAGAATCGAGGCTTGCCTTATTTAAAAGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGA
131 ACAAGAATCGAGGCTTGCCTTATTT-AAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGA
4459 AAAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAG
195 AAAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAG
4524 TACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAA
260 TACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAA
4589 CTTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACC-AAGCATCATTATGATC
325 CTTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATC
4653 TATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTA
390 TATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTA
*
4718 TTCATGTTTGTCATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTT
455 TTCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTT
4783 CTTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGC
520 CTTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGC
*
4848 AAAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTATTGAGGAGAATGTGTT
585 AAAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTT
4913 TATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTC
650 TATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTC
4978 ACGAACTTAGACTTTAC-AAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATA
715 ACGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATA
5042 TGATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTG
780 TGATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTG
5107 AGTATTCATGTTTGTCGTATTTAAGA
845 AGTATTCATGTTTGTCGTATTTAAGA
5133 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
1 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
* *
5198 TATCATGCATCCTAATGAAGGGAATGTATTTTGGCATCCAAATCATTAAAAGAATGGAGACTGCT
66 TATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
*
5263 ACAAGAATCGAGGCTTGCCTTATTTAAAGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
131 ACAAGAATCGAGGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
5328 AAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGT
196 AAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGT
5393 ACCTAATCAC-AAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAAC
261 ACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAAC
*
5457 TTAGACTTTTGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCT
326 TTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCT
5522 ATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTAT
391 ATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTAT
5587 TCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTC
456 TCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTC
5652 TTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCA
521 TTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCA
5717 AAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTT
586 AAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTT
5782 ATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCA
651 ATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCA
5847 CGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATAT
716 CGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATAT
5912 GATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGA
781 GATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGA
5977 GTATTCATGTTTGTCGTATTTAAGA
846 GTATTCATGTTTGTCGTATTTAAGA
*
6002 GACAAACTTTGATTTTATCGAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
1 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
*
6067 TATCATGCATCCTAATGAATGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
66 TATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
*
6132 ACAAGAATCGAGGCTTGCCTTATTTAAAATATGAACTTTGATTTTAAGGAAAATAGGGCTAAAGA
131 ACAAGAATCGAGGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGC-AAAGA
6197 AAAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAG
195 AAAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAG
6262 TACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAA
260 TACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAA
6327 CTTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATC
325 CTTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATC
6392 TATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTA
390 TATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTA
6457 TTCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTT
455 TTCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTT
6522 CTTGCAACCCCAAACGTGGCTTGCCTTATTTAA-GGATGAACTTTGATTGTAAGGAAAATAGGGC
520 CTTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGC
6586 AAAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTT
585 AAAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTT
6651 TATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTC
650 TATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTC
6716 ACGAACTTAGACTTTACAAAAATTGGTAGG-AAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATA
715 ACGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATA
6780 TGATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTG
780 TGATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTG
6845 AGTATTCATGTTTGTCGT-TTTAAGA
845 AGTATTCATGTTTGTCGTATTTAAGA
6870 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
1 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
6935 TATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
66 TATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
*
7000 ACAAGAATCGAGGCTTGCCTTATTTAAAATATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
131 ACAAGAATCGAGGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
7065 AAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGT
196 AAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGT
7130 ACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAAC
261 ACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAAC
7195 TTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCT
326 TTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCT
7260 ATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTAT
391 ATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTAT
*
7325 TCATGTTTGTCATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTC
456 TCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTC
7390 TTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCA
521 TTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCA
7455 AAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTT
586 AAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTT
7520 ATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCA
651 ATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCA
7585 CGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATAT
716 CGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATAT
7650 GATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGA
781 GATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGA
7715 GTATTCATGTTTGTCGTATTTAAGA
846 GTATTCATGTTTGTCGTATTTAAGA
7740 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
1 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
7805 TATCATGCATCCTAATGAAGGGAATGTAGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGC
66 TATCATGCATCCTAATGAAGGGAATGT-GTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGC
*
7870 TACAAGAATCGAGGCTTGCCTTATTTAAAGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGA
130 TACAAGAATCGAGGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGA
7935 AAAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAG
195 AAAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAG
8000 TACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAA
260 TACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAA
*
8065 CTTAGACTTTTGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATC
325 CTTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATC
8130 TATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTA
390 TATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTA
8195 TTCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTT
455 TTCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTT
8260 CTTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGC
520 CTTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGC
8325 AAAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTT
585 AAAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTT
8390 TATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTC
650 TATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTC
8455 ACGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATA
715 ACGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATA
8520 TGATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTG
780 TGATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTG
8585 AGTATTCATGTTTGTCGTATTTAAGA
845 AGTATTCATGTTTGTCGTATTTAAGA
8611 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
1 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
8676 TATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
66 TATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
*
8741 ACAAGAATCGAGGCTTGCCTTATTTAAAGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
131 ACAAGAATCGAGGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
8806 AAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGT
196 AAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGT
8871 ACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAAC
261 ACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAAC
8936 TTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCT
326 TTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCT
9001 ATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTAT
391 ATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTAT
9066 TCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTC
456 TCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTC
9131 TTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCA
521 TTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCA
9196 AAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTT
586 AAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTT
9261 ATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCA
651 ATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCA
9326 CGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATAT
716 CGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATAT
9391 GATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGA
781 GATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGA
9456 GTATTCATGTTTGTCGTATTTAAGA
846 GTATTCATGTTTGTCGTATTTAAGA
9481 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
1 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
9546 TATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
66 TATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
9611 ACAAGAATCGAGGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
131 ACAAGAATCGAGGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
9676 AAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGT
196 AAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGT
9741 ACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAAC
261 ACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAAC
9806 TTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCT
326 TTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCT
9871 ATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTAT
391 ATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTAT
9936 TCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTC
456 TCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTC
10001 TTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCA
521 TTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCA
10066 AAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTT
586 AAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTT
10131 ATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCA
651 ATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCA
10196 CGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATAT
716 CGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATAT
10261 GATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGA
781 GATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGA
10326 GTATTCATGTTTGTCGTATTTAAGA
846 GTATTCATGTTTGTCGTATTTAAGA
10351 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
1 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
*
10416 TATCATGCATCCTAATGAAGGGAATGTATTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
66 TATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
*
10481 ACAAGAATCGAGGCTTGCCTTATTTAAAGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
131 ACAAGAATCGAGGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
10546 AAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGT
196 AAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGT
10611 ACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAAC
261 ACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAAC
*
10676 TTAGACTTTTGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCT
326 TTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCT
10741 ATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTAT
391 ATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTAT
10806 TCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTC
456 TCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTC
10871 TTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCA
521 TTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCA
10936 AAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTT
586 AAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTT
11001 ATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCA
651 ATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCA
11066 CGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATAT
716 CGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATAT
11131 GATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGA
781 GATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGA
11196 GTATTCATGTTTGTCGTATTTAAGA
846 GTATTCATGTTTGTCGTATTTAAGA
11221 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
1 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
*
11286 TATCATGCATCCTAATGAAGGGAATGTATTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
66 TATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
11351 ACAAGAATCGAGGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
131 ACAAGAATCGAGGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
11416 AAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGT
196 AAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGT
11481 ACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAAC
261 ACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAAC
11546 TTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCT
326 TTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCT
11611 ATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTAT
391 ATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTAT
*
11676 TCATGTTTGTCATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTC
456 TCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTC
11741 TTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCA
521 TTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCA
11806 AAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTT
586 AAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTT
11871 ATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCA
651 ATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCA
11936 CGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATAT
716 CGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATAT
12001 GATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGA
781 GATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGA
12066 GTATTCATGTTTGTCGTATTTAAGA
846 GTATTCATGTTTGTCGTATTTAAGA
12091 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
1 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
12156 TATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
66 TATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
12221 ACAAGAATCGAGGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
131 ACAAGAATCGAGGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
12286 AAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGT
196 AAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGT
12351 ACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAAC
261 ACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAAC
12416 TTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCT
326 TTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCT
12481 ATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTAT
391 ATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTAT
*
12546 TCATGTTTGTCATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTC
456 TCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTC
12611 TTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCA
521 TTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCA
12676 AAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTT
586 AAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTT
12741 ATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCA
651 ATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCA
12806 CGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATAT
716 CGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATAT
12871 GATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGA
781 GATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGA
12936 GTATTCATGTTTGTCGTATTTAAGA
846 GTATTCATGTTTGTCGTATTTAAGA
12961 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
1 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
*
13026 TATCATGCATCCTAATGAAGGGAATGTCTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
66 TATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
*
13091 ACAAGAATCGAGGCTTGCCTTATTTAAAGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
131 ACAAGAATCGAGGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
13156 AAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGT
196 AAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGT
13221 ACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAAC
261 ACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAAC
13286 TTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCT
326 TTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCT
13351 ATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTAT
391 ATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTAT
13416 TCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTC
456 TCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTC
13481 TTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCA
521 TTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCA
13546 AAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTT
586 AAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTT
13611 ATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCA
651 ATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCA
13676 CGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATAT
716 CGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATAT
13741 GATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGA
781 GATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGA
13806 GTATTCATGTTTGTCGTATTTAAGA
846 GTATTCATGTTTGTCGTATTTAAGA
13831 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
1 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
13896 TATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
66 TATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
13961 ACAAGAATCGAGGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
131 ACAAGAATCGAGGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
14026 AAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGT
196 AAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGT
14091 ACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAAC
261 ACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAAC
14156 TTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCT
326 TTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCT
14221 ATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTAT
391 ATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTAT
14286 TCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTC
456 TCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTC
14351 TTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCA
521 TTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCA
14416 AAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTT
586 AAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTT
14481 ATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCA
651 ATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCA
14546 CGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATAT
716 CGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATAT
14611 GATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGA
781 GATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGA
14676 GTATTCATGTTTGTCGTATTTAAGA
846 GTATTCATGTTTGTCGTATTTAAGA
14701 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
1 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
14766 TATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
66 TATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
14831 ACAAGAATCGAGGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
131 ACAAGAATCGAGGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
14896 AAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGT
196 AAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGT
14961 ACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAAC
261 ACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAAC
15026 TTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCT
326 TTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCT
15091 ATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTAT
391 ATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTAT
15156 TCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTC
456 TCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTC
15221 TTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCA
521 TTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCA
15286 AAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTT
586 AAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTT
15351 ATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCA
651 ATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCA
15416 CGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATAT
716 CGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATAT
15481 GATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGA
781 GATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGA
15546 GTATTCATGTTTGTCGTATTTAAGA
846 GTATTCATGTTTGTCGTATTTAAGA
15571 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
1 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
15636 TATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
66 TATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
15701 ACAAGAATCGAGGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
131 ACAAGAATCGAGGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
15766 AAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGT
196 AAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGT
15831 ACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAAC
261 ACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAAC
15896 TTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCT
326 TTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCT
15961 ATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTAT
391 ATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTAT
16026 TCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTC
456 TCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTC
16091 TTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCA
521 TTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCA
16156 AAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTT
586 AAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTT
16221 ATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCA
651 ATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCA
16286 CGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATAT
716 CGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATAT
16351 GATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGA
781 GATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGA
16416 GTATTCATGTTTGTCGTATTTAAGA
846 GTATTCATGTTTGTCGTATTTAAGA
16441 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
1 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
*
16506 TATCATGCATCCTAATGAAGGGAATGTATTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
66 TATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
*
16571 ACAAGAATCGAGGCTTGCCTTATTTAAAGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
131 ACAAGAATCGAGGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
16636 AAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGT
196 AAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGT
16701 ACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAAC
261 ACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAAC
16766 TTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCT
326 TTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCT
16831 ATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTAT
391 ATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTAT
*
16896 TCATGTTTGTCATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTC
456 TCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTC
16961 TTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCA
521 TTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCA
17026 AAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTT
586 AAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTT
17091 ATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCA
651 ATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCA
17156 CGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATAT
716 CGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATAT
17221 GATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGA
781 GATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGA
17286 GTATTCATGTTTGTCGTATTTAAGA
846 GTATTCATGTTTGTCGTATTTAAGA
17311 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
1 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
17376 TATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
66 TATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
17441 ACAAGAATCGAGGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
131 ACAAGAATCGAGGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
17506 AAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGT
196 AAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGT
17571 ACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAAC
261 ACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAAC
17636 TTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCT
326 TTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCT
17701 ATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTAT
391 ATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTAT
17766 TCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTC
456 TCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTC
17831 TTGCAACCCCAAACGTGGCTTGCCTTATTTAA-GGATGAACTTTGATTGTAAGGAAAATAGGGCA
521 TTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCA
17895 AAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTT
586 AAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTT
17960 ATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCA
651 ATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCA
18025 CGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATAT
716 CGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATAT
18090 GATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGA
781 GATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGA
18155 GTATTCATGTTTGTCGTATTTAAGA
846 GTATTCATGTTTGTCGTATTTAAGA
18180 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
1 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
18245 TATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
66 TATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
18310 ACAAGAATCGAGGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
131 ACAAGAATCGAGGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
18375 AAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGT
196 AAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGT
18440 ACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAAC
261 ACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAAC
*
18505 TTAGACTTTTGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCT
326 TTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCT
18570 ATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTAT
391 ATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTAT
18635 TCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTC
456 TCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTC
18700 TTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCA
521 TTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCA
18765 AAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTT
586 AAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTT
18830 ATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCA
651 ATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCA
18895 CGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATAT
716 CGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATAT
18960 GATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGA
781 GATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGA
19025 GTATTCATGTTTGTCGTATTTAAGA
846 GTATTCATGTTTGTCGTATTTAAGA
19050 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
1 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
19115 TATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
66 TATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
19180 ACAAGAATCGAGGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
131 ACAAGAATCGAGGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
19245 AAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGT
196 AAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGT
19310 ACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAAC
261 ACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAAC
19375 TTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCT
326 TTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCT
19440 ATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTAT
391 ATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTAT
19505 TCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTC
456 TCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTC
19570 TTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCA
521 TTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCA
19635 AAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTT
586 AAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTT
19700 ATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCA
651 ATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCA
19765 CGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATAT
716 CGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATAT
19830 GATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGA
781 GATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGA
19895 GTATTCATGTTTGTCGTATTTAAGA
846 GTATTCATGTTTGTCGTATTTAAGA
19920 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
1 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
19985 TATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
66 TATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
20050 ACAAGAATCGAGGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
131 ACAAGAATCGAGGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
20115 AAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGT
196 AAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGT
*
20180 ACCTAATCACAAAATGAACGAAGATCTTTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAAC
261 ACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAAC
20245 TTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCT
326 TTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCT
20310 ATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTAT
391 ATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTAT
20375 TCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTC
456 TCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTC
20440 TTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCA
521 TTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCA
*
20505 AAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTATTGAGGAGAATGTGTTT
586 AAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTT
20570 ATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCA
651 ATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCA
20635 CGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATAT
716 CGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATAT
20700 GATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGA
781 GATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGA
20765 GTATTCATGTTTGTCGTATTTAAGA
846 GTATTCATGTTTGTCGTATTTAAGA
20790 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
1 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
20855 TATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
66 TATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
20920 ACAAGAATCGAGGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
131 ACAAGAATCGAGGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
20985 AAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGT
196 AAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGT
21050 ACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAAC
261 ACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAAC
21115 TTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCT
326 TTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCT
21180 ATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTAT
391 ATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTAT
21245 TCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTC
456 TCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTC
21310 TTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCA
521 TTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCA
21375 AAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTT
586 AAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTT
21440 ATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCA
651 ATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCA
21505 CGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATAT
716 CGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATAT
21570 GATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGA
781 GATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGA
21635 GTATTCATGTTTGTCGTATTTAAGA
846 GTATTCATGTTTGTCGTATTTAAGA
21660 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
1 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
21725 TATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
66 TATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
21790 ACAAGAATCGAGGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
131 ACAAGAATCGAGGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
21855 AAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGT
196 AAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGT
*
21920 ACCTAATCACAAAATGAACGAAGATCTTTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAAC
261 ACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAAC
21985 TTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCT
326 TTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCT
22050 ATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTAT
391 ATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTAT
22115 TCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTC
456 TCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTC
*
22180 TTGCCACCCCAAACGTGGCTTGCCTTATTTAA-GGATGAACTTTGATTGTAAGGAAAATAGGGCA
521 TTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCA
*
22244 AAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTATTGAGGAGAATGTGTTT
586 AAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTT
22309 ATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCA
651 ATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCA
22374 CGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATAT
716 CGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATAT
22439 GATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGA
781 GATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGA
22504 GTATTCATG-TTGTCGTA-TTAAGA
846 GTATTCATGTTTGTCGTATTTAAGA
*
22527 GACAAACTTTGATTTTATCGAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
1 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
22592 TATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
66 TATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
22657 ACAAGAATCGAGGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
131 ACAAGAATCGAGGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
22722 AAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGT
196 AAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGT
22787 ACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAAC
261 ACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAAC
22852 TTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCT
326 TTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCT
22917 ATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTAT
391 ATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTAT
22982 TCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTC
456 TCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTC
23047 TTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCA
521 TTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCA
*
23112 AAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTATTGAGGAGAATGTGTTT
586 AAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTT
23177 ATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCA
651 ATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCA
23242 CGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATAT
716 CGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATAT
23307 GATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGA
781 GATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGA
23372 GTATTCATGTTTGTCGTATTTAAGA
846 GTATTCATGTTTGTCGTATTTAAGA
23397 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
1 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
*
23462 TATCATGCATCCTAATGAATGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
66 TATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
23527 ACAAGAATCGAGGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
131 ACAAGAATCGAGGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
23592 AAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGT
196 AAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGT
*
23657 ACCTAATCACAAAATGAACGAAGATCTTTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAAC
261 ACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAAC
*
23722 TTAGACTTTTGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCT
326 TTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCT
23787 ATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTAT
391 ATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTAT
23852 TCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTC
456 TCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTC
*
23917 TTGCCACCCCAAACGTGGCTTGCCTTATTTAA-GGATGAACTTTGATTGTAAGGAAAATAGGGCA
521 TTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCA
*
23981 AAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTATTGAGGAGAATGTGTTT
586 AAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTT
24046 ATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCA
651 ATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCA
24111 CGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATAT
716 CGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATAT
24176 GATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGA
781 GATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGA
24241 GTATTCATGTTTGTCGTATTTAAGA
846 GTATTCATGTTTGTCGTATTTAAGA
* * *
24266 GACAAACTTTGATTTTATCGAAAACGGTGGGAAGAAAAGCTTTTCTTATGACACCAAAGCATCAA
1 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
24331 TATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
66 TATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
24396 ACAAGAATCGAGGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
131 ACAAGAATCGAGGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
24461 AAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGT
196 AAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGT
*
24526 ACCTAATCACAAAATGAACGAAGATCTTTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAAC
261 ACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAAC
24591 TTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCT
326 TTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCT
24656 ATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTAT
391 ATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTAT
24721 TCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTC
456 TCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTC
* *
24786 TTGCCACCCCAAACGTGGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCA
521 TTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCA
*
24851 AAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTATTGAGGAGAATGTGTTT
586 AAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTT
*
24916 ATACTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCA
651 ATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCA
24981 CGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATAT
716 CGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATAT
25046 GATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGA
781 GATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGA
25111 GTATTCATG-TTGTCGTATTTAAGA
846 GTATTCATGTTTGTCGTATTTAAGA
25135 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
1 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
25200 TATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
66 TATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
25265 ACAAGAATCGAGGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
131 ACAAGAATCGAGGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
25330 AAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGT
196 AAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGT
25395 ACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAAC
261 ACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAAC
25460 TTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCT
326 TTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCT
25525 ATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTAT
391 ATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTAT
25590 TCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTC
456 TCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTC
25655 TTGCAACCCCAAACGTGGCTTGCCTTATTTAA-GGATGAACTTTGATTGTAAGGAAAATAGGGCA
521 TTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCA
25719 AAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTT
586 AAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTT
25784 ATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCA
651 ATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCA
25849 CGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATAT
716 CGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATAT
25914 GATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGA
781 GATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGA
25979 GTATTCATGTTTGTCGTATTTAAGA
846 GTATTCATGTTTGTCGTATTTAAGA
26004 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
1 GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
26069 TATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
66 TATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
26134 ACAAGAATCGAGGCTTGCCTTATTTAAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGA
131 ACAAGAATCGAGGCTTGCCTTATTT-AAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGA
26199 AAAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAG
195 AAAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAG
26264 TACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAA
260 TACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAA
26329 CTTAGACTTTAGAAAAATTGG
325 CTTAGACTTTAGAAAAATTGG
Statistics
Matches: 23641, Mismatches: 106, Indels: 148
0.99 0.00 0.01
Matches are distributed among these distances:
861 18 0.00
862 22 0.00
863 75 0.00
864 199 0.01
865 537 0.02
866 513 0.02
867 1310 0.06
868 1834 0.08
869 3494 0.15
870 14059 0.59
871 1192 0.05
872 40 0.00
873 73 0.00
874 42 0.00
875 113 0.00
876 46 0.00
877 19 0.00
878 27 0.00
879 4 0.00
880 19 0.00
881 5 0.00
ACGTcount: A:0.37, C:0.15, G:0.19, T:0.30
Consensus pattern (870 bp):
GACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAA
TATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATGGAGACTGCT
ACAAGAATCGAGGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
AAGATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGT
ACCTAATCACAAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAAC
TTAGACTTTAGAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCT
ATTCAAATGAGAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTAT
TCATGTTTGTAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTC
TTGCAACCCCAAACGTGGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCA
AAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTT
ATAGTGTCTAATGACCAAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCA
CGAACTTAGACTTTACAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATAT
GATGTATCCTAATGAGGAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGA
GTATTCATGTTTGTCGTATTTAAGA
Found at i:9521 original size:395 final size:395
Alignment explanation
Indices: 8752--9527 Score: 1180
Period size: 395 Copynumber: 2.0 Consensus size: 395
8742 CAAGAATCGA
*
8752 GGCTTGCCTTATTTAAAGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
1 GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
* *
8817 GCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
66 GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
* * * *
8882 AAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAG
131 AAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC
* * * * *
8947 AAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCTATTCAAATGAG
196 AAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGAG
* * *
9012 AAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTA
261 AAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTA
9077 ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
326 ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
9142 AACGT
391 AACGT
*
9147 GGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
1 GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
* * ** *
9212 GCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTTATAGTGTCTAATGACC
66 GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCA-C
* * *
9277 AAAA-GAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCACGAACTTAGACTTTA
130 AAAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTA
* * * *
9341 CAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATATGATGTATCCTAATGA
195 CAAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGA
* **
9406 GGAGACTACG-TTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCT-TGAGTATTCATGTTTG
260 GAAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAG-TATGAGTATTCATGTTTG
** * * *
9469 TCGTATTTAAGAGACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTT
324 TAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAA-AAAAGCTTTTCTT
9528 ACGACACCAA
Statistics
Matches: 342, Mismatches: 36, Indels: 6
0.89 0.09 0.02
Matches are distributed among these distances:
394 87 0.25
395 250 0.73
396 5 0.01
ACGTcount: A:0.36, C:0.14, G:0.19, T:0.31
Consensus pattern (395 bp):
GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
AAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC
AAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGAG
AAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTA
ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
AACGT
Found at i:9806 original size:159 final size:159
Alignment explanation
Indices: 9157--9807 Score: 416
Period size: 159 Copynumber: 4.1 Consensus size: 159
9147 GGCTTGCCTT
* * * *
9157 ATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGG-GCAAAGAAAAGATTTTCATGCAAAAGAA
1 ATTTAAGGCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAA
* * * ** *
9221 AATCATCAATATCATATATCCTATTGAGGAGAATGTGTTTATAGTGTCTAATGACCAAAAGAATG
66 AAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACCAAAAGAATG
* *
9286 AATATCATTACAAGAATCCATGTTTGTCTC
131 AAGA-CTTTACAAGAATCCATGTTTGTCTC
* * * * * * ** * *
9316 ATTTGAGTCACGAACTTAGACTTTACA--AAAATTGGTAG-GAA-AAAAGCCTTTCCTGCGAAAC
1 ATTTAAGGCACGAACTTTGATTTTA-AGGAAAATAGGT-GCAAAGAAAAGATTTTCATGCAAAAC
* * * * ** * * *
9377 CAAAGCGTCAATATGATGTATCCTAATGAGGAGACTACG-TTATGGTGCCTAATC-CTGAAAAGA
64 AAAAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCAC-CAAAAGA
** * * *
9440 ATGGGGA--TTAGCTTGAGTATTCATGTTTGTCGT-
128 ATGAAGACTTTA-C--AAGAATCCATGTTTGTC-TC
* *** * * * * * * * *
9473 ATTTAAGAG-ACAAACTTTGATTTTATCCAAAA-CGGTGGAAAGAAAAGCTTTTCTTACGACACC
1 ATTTAAG-GCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACA
* * * * **
9536 AAAGCATCAATATCATGCATCCTAATGAAGG-GAATGTGTTT-TGGCATCCAAATCATGAAAAGA
65 AAAGCATCAATATCATGTATCCTAATG-AGGAGAATGTGTTTATAGTA-CCTAATCACCAAAAGA
* * * * * * *
9599 ATGGAGACTGCTACAAGAATCGAGGCTTGCCTT
128 ATGAAGACT-TTACAAGAATCCATGTTTGTCTC
* * * *
9632 ATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGG-GCAAAGAAAAGATTTTCATGCAAAATAA
1 ATTTAAGGCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAA
* * * *
9696 AATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCA-CAAAATGAAC
66 AAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACCAAAA-GAAT
* *
9760 GAAGATCTTTACTAGGATCCATGTTTGTCTC
130 GAAGA-CTTTACAAGAATCCATGTTTGTCTC
*
9791 ATTTGAGGCACGAACTT
1 ATTTAAGGCACGAACTT
9808 AGACTTTAGA
Statistics
Matches: 364, Mismatches: 101, Indels: 54
0.70 0.19 0.10
Matches are distributed among these distances:
154 3 0.01
155 1 0.00
156 2 0.01
157 60 0.16
158 113 0.31
159 173 0.48
160 9 0.02
161 1 0.00
162 2 0.01
ACGTcount: A:0.37, C:0.15, G:0.19, T:0.29
Consensus pattern (159 bp):
ATTTAAGGCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAA
AAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACCAAAAGAATG
AAGACTTTACAAGAATCCATGTTTGTCTC
Found at i:10391 original size:395 final size:395
Alignment explanation
Indices: 9622--10397 Score: 1171
Period size: 395 Copynumber: 2.0 Consensus size: 395
9612 CAAGAATCGA
* *
9622 GGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
1 GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
* *
9687 GCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
66 GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
* * * *
9752 AAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAG
131 AAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC
* * * * *
9817 AAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCTATTCAAATGAG
196 AAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGAG
* * *
9882 AAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTA
261 AAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTA
9947 ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
326 ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
10012 AACGT
391 AACGT
*
10017 GGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
1 GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
* * ** *
10082 GCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTTATAGTGTCTAATGACC
66 GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCA-C
* * *
10147 AAAA-GAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCACGAACTTAGACTTTA
130 AAAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTA
* * * *
10211 CAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATATGATGTATCCTAATGA
195 CAAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGA
* **
10276 GGAGACTACG-TTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCT-TGAGTATTCATGTTTG
260 GAAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAG-TATGAGTATTCATGTTTG
** * * *
10339 TCGTATTTAAGAGACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTT
324 TAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAA-AAAAGCTTTTCTT
10398 ACGACACCAA
Statistics
Matches: 341, Mismatches: 37, Indels: 6
0.89 0.10 0.02
Matches are distributed among these distances:
394 87 0.26
395 249 0.73
396 5 0.01
ACGTcount: A:0.36, C:0.14, G:0.19, T:0.31
Consensus pattern (395 bp):
GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
AAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC
AAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGAG
AAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTA
ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
AACGT
Found at i:10619 original size:159 final size:158
Alignment explanation
Indices: 10017--10619 Score: 386
Period size: 159 Copynumber: 3.8 Consensus size: 158
10007 CCCCAAACGT
* * *
10017 GGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGG-GCAAAGAAAAGATTTTCA
1 GGCTTGCCTTATTTAAGAGACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCA
* * * * ** * *
10081 TGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTTATAGTGTCTAATGAC
66 TGCAAAACAAAAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCAT
* * *
10146 CAAAAGAATGAATAT-CATTACAAGAATCCA
131 GAAAAGAATGGAGATGC--TACAAGAAT-CA
* * * * * ** * * * * **
10176 TGTTTGTCTCATTTGAGTCACGAACTTAGACTTTACA--AAAATTGGTAG-GAA-AAAAGCCTTT
1 GGCTTGCCTTATTTAAGAGACGAACTTTGATTTTA-AGGAAAATAGGT-GCAAAGAAAAGATTTT
* * * * * * ** * *
10237 CCTGCGAAACCAAAGCGTCAATATGATGTATCCTAATGAGGAGACTACG-TTATGGTGCCTAATC
64 CATGCAAAACAAAAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATC
* * ** *
10301 CTGAAAAGAATGGGGATTAGCT-TGAGTATTCA
129 ATGAAAAGAATGGAGA-T-GCTACAAG-AATCA
* * * * * *** * * * *
10333 TGTTTGTCGTATTTAAGAGACAAACTTTGATTTTATCCAAAA-CGGTGGAAAGAAAAGCTTTTCT
1 GGCTTGCCTTATTTAAGAGACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCA
* * * * * * * * *
10397 TACGACACCAAAGCATCAATATCATGCATCCTAATGAAGG-GAATGTATTT-TGGCATCCAAATC
66 TGCAAAACAAAAGCATCAATATCATGTATCCTAATG-AGGAGAATGTGTTTATAGTA-CCTAATC
10460 ATGAAAAGAATGGAGACTGCTACAAGAATCGA
129 ATGAAAAGAATGGAGA-TGCTACAAGAATC-A
*
10492 GGCTTGCCTTATTTAA-AGGATGAACTTTGATTTTAAGGAAAATAGG-GCAAAGAAAAGATTTTC
1 GGCTTGCCTTATTTAAGA-GACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTC
* * * *
10555 ATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCA
65 ATGCAAAACAAAAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCA
10620 CAAAATGAAC
Statistics
Matches: 328, Mismatches: 96, Indels: 40
0.71 0.21 0.09
Matches are distributed among these distances:
156 1 0.00
157 58 0.18
158 116 0.35
159 145 0.44
160 8 0.02
ACGTcount: A:0.37, C:0.14, G:0.19, T:0.29
Consensus pattern (158 bp):
GGCTTGCCTTATTTAAGAGACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCA
TGCAAAACAAAAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCAT
GAAAAGAATGGAGATGCTACAAGAATCA
Found at i:11261 original size:395 final size:395
Alignment explanation
Indices: 10492--11267 Score: 1171
Period size: 395 Copynumber: 2.0 Consensus size: 395
10482 CAAGAATCGA
*
10492 GGCTTGCCTTATTTAAAGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
1 GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
* *
10557 GCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
66 GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
* * * **
10622 AAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTTG
131 AAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC
* * * * *
10687 AAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCTATTCAAATGAG
196 AAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGAG
* * *
10752 AAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTA
261 AAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTA
10817 ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
326 ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
10882 AACGT
391 AACGT
*
10887 GGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
1 GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
* * ** *
10952 GCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTTATAGTGTCTAATGACC
66 GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCA-C
* * *
11017 AAAA-GAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCACGAACTTAGACTTTA
130 AAAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTA
* * * *
11081 CAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATATGATGTATCCTAATGA
195 CAAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGA
* **
11146 GGAGACTACG-TTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCT-TGAGTATTCATGTTTG
260 GAAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAG-TATGAGTATTCATGTTTG
** * * *
11209 TCGTATTTAAGAGACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTT
324 TAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAA-AAAAGCTTTTCTT
11268 ACGACACCAA
Statistics
Matches: 341, Mismatches: 37, Indels: 6
0.89 0.10 0.02
Matches are distributed among these distances:
394 87 0.26
395 249 0.73
396 5 0.01
ACGTcount: A:0.36, C:0.14, G:0.19, T:0.31
Consensus pattern (395 bp):
GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
AAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC
AAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGAG
AAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTA
ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
AACGT
Found at i:11489 original size:159 final size:158
Alignment explanation
Indices: 10887--11489 Score: 379
Period size: 159 Copynumber: 3.8 Consensus size: 158
10877 CCCCAAACGT
* * * *
10887 GGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGG-GCAAAGAAAAGATTTTCA
1 GGCTTGCCTTATTTAAAGTACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCA
* * * * ** * *
10951 TGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTTATAGTGTCTAATGAC
66 TGCAAAACAAAAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCAT
* * *
11016 CAAAAGAATGAATAT-CATTACAAGAATCCA
131 GAAAAGAATGGAGATGC--TACAAGAAT-CA
* * * * * * * * * **
11046 TGTTTGTCTCATTT-GAGTCACGAACTTAGACTTTACA--AAAATTGGTAG-GAA-AAAAGCCTT
1 GGCTTGCCTTATTTAAAGT-ACGAACTTTGATTTTA-AGGAAAATAGGT-GCAAAGAAAAGATTT
* * * * * * ** * *
11106 TCCTGCGAAACCAAAGCGTCAATATGATGTATCCTAATGAGGAGACTACG-TTATGGTGCCTAAT
63 TCATGCAAAACAAAAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAAT
* * ** *
11170 CCTGAAAAGAATGGGGATTAGCT-TGAGTATTCA
128 CATGAAAAGAATGGAGA-T-GCTACAAG-AATCA
* * * * * *** * * *
11203 TGTTTGTCGTATTTAAGAG-ACAAACTTTGATTTTATCCAAAA-CGGTGGAAAGAAAAGCTTTTC
1 GGCTTGCCTTATTTAA-AGTACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTC
* * * * * * * * * *
11266 TTACGACACCAAAGCATCAATATCATGCATCCTAATGAAGG-GAATGTATTT-TGGCATCCAAAT
65 ATGCAAAACAAAAGCATCAATATCATGTATCCTAATG-AGGAGAATGTGTTTATAGTA-CCTAAT
11329 CATGAAAAGAATGGAGACTGCTACAAGAATCGA
128 CATGAAAAGAATGGAGA-TGCTACAAGAATC-A
*
11362 GGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGG-GCAAAGAAAAGATTTTCA
1 GGCTTGCCTTATTTAAAGTACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCA
* * * *
11426 TGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCA
66 TGCAAAACAAAAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCA
11490 CAAAATGAAC
Statistics
Matches: 327, Mismatches: 94, Indels: 46
0.70 0.20 0.10
Matches are distributed among these distances:
156 1 0.00
157 56 0.17
158 118 0.36
159 144 0.44
160 8 0.02
ACGTcount: A:0.37, C:0.14, G:0.19, T:0.30
Consensus pattern (158 bp):
GGCTTGCCTTATTTAAAGTACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCA
TGCAAAACAAAAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCAT
GAAAAGAATGGAGATGCTACAAGAATCA
Found at i:12131 original size:395 final size:395
Alignment explanation
Indices: 11362--12137 Score: 1180
Period size: 395 Copynumber: 2.0 Consensus size: 395
11352 CAAGAATCGA
* *
11362 GGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
1 GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
* *
11427 GCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
66 GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
* * * *
11492 AAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAG
131 AAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC
* * * * *
11557 AAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCTATTCAAATGAG
196 AAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGAG
* * *
11622 AAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTC
261 AAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTC
11687 ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
326 ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
11752 AACGT
391 AACGT
*
11757 GGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
1 GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
* * ** *
11822 GCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTTATAGTGTCTAATGACC
66 GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCA-C
* * *
11887 AAAA-GAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCACGAACTTAGACTTTA
130 AAAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTA
* * * *
11951 CAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATATGATGTATCCTAATGA
195 CAAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGA
* **
12016 GGAGACTACG-TTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCT-TGAGTATTCATGTTTG
260 GAAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAG-TATGAGTATTCATGTTTG
* * * *
12079 TCGTATTTAAGAGACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTT
324 TCATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAA-AAAAGCTTTTCTT
12138 ACGACACCAA
Statistics
Matches: 342, Mismatches: 36, Indels: 6
0.89 0.09 0.02
Matches are distributed among these distances:
394 88 0.26
395 249 0.73
396 5 0.01
ACGTcount: A:0.36, C:0.14, G:0.19, T:0.31
Consensus pattern (395 bp):
GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
AAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC
AAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGAG
AAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTC
ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
AACGT
Found at i:12416 original size:159 final size:159
Alignment explanation
Indices: 11767--12417 Score: 416
Period size: 159 Copynumber: 4.1 Consensus size: 159
11757 GGCTTGCCTT
* * * *
11767 ATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGG-GCAAAGAAAAGATTTTCATGCAAAAGAA
1 ATTTAAGGCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAA
* * * ** *
11831 AATCATCAATATCATATATCCTATTGAGGAGAATGTGTTTATAGTGTCTAATGACCAAAAGAATG
66 AAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACCAAAAGAATG
* *
11896 AATATCATTACAAGAATCCATGTTTGTCTC
131 AAGA-CTTTACAAGAATCCATGTTTGTCTC
* * * * * * ** * *
11926 ATTTGAGTCACGAACTTAGACTTTACA--AAAATTGGTAG-GAA-AAAAGCCTTTCCTGCGAAAC
1 ATTTAAGGCACGAACTTTGATTTTA-AGGAAAATAGGT-GCAAAGAAAAGATTTTCATGCAAAAC
* * * * ** * * *
11987 CAAAGCGTCAATATGATGTATCCTAATGAGGAGACTACG-TTATGGTGCCTAATC-CTGAAAAGA
64 AAAAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCAC-CAAAAGA
** * * *
12050 ATGGGGA--TTAGCTTGAGTATTCATGTTTGTCGT-
128 ATGAAGACTTTA-C--AAGAATCCATGTTTGTC-TC
* *** * * * * * * * *
12083 ATTTAAGAG-ACAAACTTTGATTTTATCCAAAA-CGGTGGAAAGAAAAGCTTTTCTTACGACACC
1 ATTTAAG-GCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACA
* * * * **
12146 AAAGCATCAATATCATGCATCCTAATGAAGG-GAATGTGTTT-TGGCATCCAAATCATGAAAAGA
65 AAAGCATCAATATCATGTATCCTAATG-AGGAGAATGTGTTTATAGTA-CCTAATCACCAAAAGA
* * * * * * *
12209 ATGGAGACTGCTACAAGAATCGAGGCTTGCCTT
128 ATGAAGACT-TTACAAGAATCCATGTTTGTCTC
* * * *
12242 ATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGG-GCAAAGAAAAGATTTTCATGCAAAATAA
1 ATTTAAGGCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAA
* * * *
12306 AATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCA-CAAAATGAAC
66 AAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACCAAAA-GAAT
* *
12370 GAAGATCTTTACTAGGATCCATGTTTGTCTC
130 GAAGA-CTTTACAAGAATCCATGTTTGTCTC
*
12401 ATTTGAGGCACGAACTT
1 ATTTAAGGCACGAACTT
12418 AGACTTTAGA
Statistics
Matches: 364, Mismatches: 101, Indels: 54
0.70 0.19 0.10
Matches are distributed among these distances:
154 3 0.01
155 1 0.00
156 2 0.01
157 60 0.16
158 113 0.31
159 173 0.48
160 9 0.02
161 1 0.00
162 2 0.01
ACGTcount: A:0.37, C:0.15, G:0.19, T:0.29
Consensus pattern (159 bp):
ATTTAAGGCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAA
AAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACCAAAAGAATG
AAGACTTTACAAGAATCCATGTTTGTCTC
Found at i:13001 original size:395 final size:395
Alignment explanation
Indices: 12232--13007 Score: 1180
Period size: 395 Copynumber: 2.0 Consensus size: 395
12222 CAAGAATCGA
* *
12232 GGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
1 GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
* *
12297 GCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
66 GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
* * * *
12362 AAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAG
131 AAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC
* * * * *
12427 AAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCTATTCAAATGAG
196 AAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGAG
* * *
12492 AAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTC
261 AAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTC
12557 ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
326 ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
12622 AACGT
391 AACGT
*
12627 GGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
1 GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
* * ** *
12692 GCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTTATAGTGTCTAATGACC
66 GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCA-C
* * *
12757 AAAA-GAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCACGAACTTAGACTTTA
130 AAAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTA
* * * *
12821 CAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATATGATGTATCCTAATGA
195 CAAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGA
* **
12886 GGAGACTACG-TTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCT-TGAGTATTCATGTTTG
260 GAAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAG-TATGAGTATTCATGTTTG
* * * *
12949 TCGTATTTAAGAGACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTT
324 TCATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAA-AAAAGCTTTTCTT
13008 ACGACACCAA
Statistics
Matches: 342, Mismatches: 36, Indels: 6
0.89 0.09 0.02
Matches are distributed among these distances:
394 88 0.26
395 249 0.73
396 5 0.01
ACGTcount: A:0.36, C:0.14, G:0.19, T:0.31
Consensus pattern (395 bp):
GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
AAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC
AAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGAG
AAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTC
ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
AACGT
Found at i:13229 original size:159 final size:158
Alignment explanation
Indices: 12627--13229 Score: 386
Period size: 159 Copynumber: 3.8 Consensus size: 158
12617 CCCCAAACGT
* * *
12627 GGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGG-GCAAAGAAAAGATTTTCA
1 GGCTTGCCTTATTTAAGAGACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCA
* * * * ** * *
12691 TGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTTATAGTGTCTAATGAC
66 TGCAAAACAAAAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCAT
* * *
12756 CAAAAGAATGAATAT-CATTACAAGAATCCA
131 GAAAAGAATGGAGATGC--TACAAGAAT-CA
* * * * * ** * * * * **
12786 TGTTTGTCTCATTTGAGTCACGAACTTAGACTTTACA--AAAATTGGTAG-GAA-AAAAGCCTTT
1 GGCTTGCCTTATTTAAGAGACGAACTTTGATTTTA-AGGAAAATAGGT-GCAAAGAAAAGATTTT
* * * * * * ** * *
12847 CCTGCGAAACCAAAGCGTCAATATGATGTATCCTAATGAGGAGACTACG-TTATGGTGCCTAATC
64 CATGCAAAACAAAAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATC
* * ** *
12911 CTGAAAAGAATGGGGATTAGCT-TGAGTATTCA
129 ATGAAAAGAATGGAGA-T-GCTACAAG-AATCA
* * * * * *** * * * *
12943 TGTTTGTCGTATTTAAGAGACAAACTTTGATTTTATCCAAAA-CGGTGGAAAGAAAAGCTTTTCT
1 GGCTTGCCTTATTTAAGAGACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCA
* * * * * * * * *
13007 TACGACACCAAAGCATCAATATCATGCATCCTAATGAAGG-GAATGTCTTT-TGGCATCCAAATC
66 TGCAAAACAAAAGCATCAATATCATGTATCCTAATG-AGGAGAATGTGTTTATAGTA-CCTAATC
13070 ATGAAAAGAATGGAGACTGCTACAAGAATCGA
129 ATGAAAAGAATGGAGA-TGCTACAAGAATC-A
*
13102 GGCTTGCCTTATTTAA-AGGATGAACTTTGATTTTAAGGAAAATAGG-GCAAAGAAAAGATTTTC
1 GGCTTGCCTTATTTAAGA-GACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTC
* * * *
13165 ATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCA
65 ATGCAAAACAAAAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCA
13230 CAAAATGAAC
Statistics
Matches: 328, Mismatches: 96, Indels: 40
0.71 0.21 0.09
Matches are distributed among these distances:
156 1 0.00
157 58 0.18
158 116 0.35
159 145 0.44
160 8 0.02
ACGTcount: A:0.37, C:0.15, G:0.19, T:0.29
Consensus pattern (158 bp):
GGCTTGCCTTATTTAAGAGACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCA
TGCAAAACAAAAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCAT
GAAAAGAATGGAGATGCTACAAGAATCA
Found at i:13871 original size:395 final size:395
Alignment explanation
Indices: 13102--13877 Score: 1180
Period size: 395 Copynumber: 2.0 Consensus size: 395
13092 CAAGAATCGA
*
13102 GGCTTGCCTTATTTAAAGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
1 GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
* *
13167 GCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
66 GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
* * * *
13232 AAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAG
131 AAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC
* * * * *
13297 AAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCTATTCAAATGAG
196 AAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGAG
* * *
13362 AAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTA
261 AAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTA
13427 ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
326 ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
13492 AACGT
391 AACGT
*
13497 GGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
1 GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
* * ** *
13562 GCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTTATAGTGTCTAATGACC
66 GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCA-C
* * *
13627 AAAA-GAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCACGAACTTAGACTTTA
130 AAAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTA
* * * *
13691 CAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATATGATGTATCCTAATGA
195 CAAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGA
* **
13756 GGAGACTACG-TTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCT-TGAGTATTCATGTTTG
260 GAAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAG-TATGAGTATTCATGTTTG
** * * *
13819 TCGTATTTAAGAGACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTT
324 TAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAA-AAAAGCTTTTCTT
13878 ACGACACCAA
Statistics
Matches: 342, Mismatches: 36, Indels: 6
0.89 0.09 0.02
Matches are distributed among these distances:
394 87 0.25
395 250 0.73
396 5 0.01
ACGTcount: A:0.36, C:0.14, G:0.19, T:0.31
Consensus pattern (395 bp):
GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
AAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC
AAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGAG
AAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTA
ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
AACGT
Found at i:14156 original size:159 final size:159
Alignment explanation
Indices: 13507--14157 Score: 416
Period size: 159 Copynumber: 4.1 Consensus size: 159
13497 GGCTTGCCTT
* * * *
13507 ATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGG-GCAAAGAAAAGATTTTCATGCAAAAGAA
1 ATTTAAGGCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAA
* * * ** *
13571 AATCATCAATATCATATATCCTATTGAGGAGAATGTGTTTATAGTGTCTAATGACCAAAAGAATG
66 AAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACCAAAAGAATG
* *
13636 AATATCATTACAAGAATCCATGTTTGTCTC
131 AAGA-CTTTACAAGAATCCATGTTTGTCTC
* * * * * * ** * *
13666 ATTTGAGTCACGAACTTAGACTTTACA--AAAATTGGTAG-GAA-AAAAGCCTTTCCTGCGAAAC
1 ATTTAAGGCACGAACTTTGATTTTA-AGGAAAATAGGT-GCAAAGAAAAGATTTTCATGCAAAAC
* * * * ** * * *
13727 CAAAGCGTCAATATGATGTATCCTAATGAGGAGACTACG-TTATGGTGCCTAATC-CTGAAAAGA
64 AAAAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCAC-CAAAAGA
** * * *
13790 ATGGGGA--TTAGCTTGAGTATTCATGTTTGTCGT-
128 ATGAAGACTTTA-C--AAGAATCCATGTTTGTC-TC
* *** * * * * * * * *
13823 ATTTAAGAG-ACAAACTTTGATTTTATCCAAAA-CGGTGGAAAGAAAAGCTTTTCTTACGACACC
1 ATTTAAG-GCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACA
* * * * **
13886 AAAGCATCAATATCATGCATCCTAATGAAGG-GAATGTGTTT-TGGCATCCAAATCATGAAAAGA
65 AAAGCATCAATATCATGTATCCTAATG-AGGAGAATGTGTTTATAGTA-CCTAATCACCAAAAGA
* * * * * * *
13949 ATGGAGACTGCTACAAGAATCGAGGCTTGCCTT
128 ATGAAGACT-TTACAAGAATCCATGTTTGTCTC
* * * *
13982 ATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGG-GCAAAGAAAAGATTTTCATGCAAAATAA
1 ATTTAAGGCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAA
* * * *
14046 AATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCA-CAAAATGAAC
66 AAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACCAAAA-GAAT
* *
14110 GAAGATCTTTACTAGGATCCATGTTTGTCTC
130 GAAGA-CTTTACAAGAATCCATGTTTGTCTC
*
14141 ATTTGAGGCACGAACTT
1 ATTTAAGGCACGAACTT
14158 AGACTTTAGA
Statistics
Matches: 364, Mismatches: 101, Indels: 54
0.70 0.19 0.10
Matches are distributed among these distances:
154 3 0.01
155 1 0.00
156 2 0.01
157 60 0.16
158 113 0.31
159 173 0.48
160 9 0.02
161 1 0.00
162 2 0.01
ACGTcount: A:0.37, C:0.15, G:0.19, T:0.29
Consensus pattern (159 bp):
ATTTAAGGCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAA
AAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACCAAAAGAATG
AAGACTTTACAAGAATCCATGTTTGTCTC
Found at i:14741 original size:395 final size:395
Alignment explanation
Indices: 13972--14747 Score: 1171
Period size: 395 Copynumber: 2.0 Consensus size: 395
13962 CAAGAATCGA
* *
13972 GGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
1 GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
* *
14037 GCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
66 GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
* * * *
14102 AAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAG
131 AAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC
* * * * *
14167 AAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCTATTCAAATGAG
196 AAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGAG
* * *
14232 AAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTA
261 AAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTA
14297 ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
326 ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
14362 AACGT
391 AACGT
*
14367 GGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
1 GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
* * ** *
14432 GCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTTATAGTGTCTAATGACC
66 GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCA-C
* * *
14497 AAAA-GAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCACGAACTTAGACTTTA
130 AAAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTA
* * * *
14561 CAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATATGATGTATCCTAATGA
195 CAAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGA
* **
14626 GGAGACTACG-TTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCT-TGAGTATTCATGTTTG
260 GAAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAG-TATGAGTATTCATGTTTG
** * * *
14689 TCGTATTTAAGAGACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTT
324 TAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAA-AAAAGCTTTTCTT
14748 ACGACACCAA
Statistics
Matches: 341, Mismatches: 37, Indels: 6
0.89 0.10 0.02
Matches are distributed among these distances:
394 87 0.26
395 249 0.73
396 5 0.01
ACGTcount: A:0.36, C:0.14, G:0.19, T:0.31
Consensus pattern (395 bp):
GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
AAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC
AAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGAG
AAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTA
ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
AACGT
Found at i:15026 original size:159 final size:159
Alignment explanation
Indices: 14377--15027 Score: 416
Period size: 159 Copynumber: 4.1 Consensus size: 159
14367 GGCTTGCCTT
* * * *
14377 ATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGG-GCAAAGAAAAGATTTTCATGCAAAAGAA
1 ATTTAAGGCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAA
* * * ** *
14441 AATCATCAATATCATATATCCTATTGAGGAGAATGTGTTTATAGTGTCTAATGACCAAAAGAATG
66 AAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACCAAAAGAATG
* *
14506 AATATCATTACAAGAATCCATGTTTGTCTC
131 AAGA-CTTTACAAGAATCCATGTTTGTCTC
* * * * * * ** * *
14536 ATTTGAGTCACGAACTTAGACTTTACA--AAAATTGGTAG-GAA-AAAAGCCTTTCCTGCGAAAC
1 ATTTAAGGCACGAACTTTGATTTTA-AGGAAAATAGGT-GCAAAGAAAAGATTTTCATGCAAAAC
* * * * ** * * *
14597 CAAAGCGTCAATATGATGTATCCTAATGAGGAGACTACG-TTATGGTGCCTAATC-CTGAAAAGA
64 AAAAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCAC-CAAAAGA
** * * *
14660 ATGGGGA--TTAGCTTGAGTATTCATGTTTGTCGT-
128 ATGAAGACTTTA-C--AAGAATCCATGTTTGTC-TC
* *** * * * * * * * *
14693 ATTTAAGAG-ACAAACTTTGATTTTATCCAAAA-CGGTGGAAAGAAAAGCTTTTCTTACGACACC
1 ATTTAAG-GCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACA
* * * * **
14756 AAAGCATCAATATCATGCATCCTAATGAAGG-GAATGTGTTT-TGGCATCCAAATCATGAAAAGA
65 AAAGCATCAATATCATGTATCCTAATG-AGGAGAATGTGTTTATAGTA-CCTAATCACCAAAAGA
* * * * * * *
14819 ATGGAGACTGCTACAAGAATCGAGGCTTGCCTT
128 ATGAAGACT-TTACAAGAATCCATGTTTGTCTC
* * * *
14852 ATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGG-GCAAAGAAAAGATTTTCATGCAAAATAA
1 ATTTAAGGCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAA
* * * *
14916 AATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCA-CAAAATGAAC
66 AAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACCAAAA-GAAT
* *
14980 GAAGATCTTTACTAGGATCCATGTTTGTCTC
130 GAAGA-CTTTACAAGAATCCATGTTTGTCTC
*
15011 ATTTGAGGCACGAACTT
1 ATTTAAGGCACGAACTT
15028 AGACTTTAGA
Statistics
Matches: 364, Mismatches: 101, Indels: 54
0.70 0.19 0.10
Matches are distributed among these distances:
154 3 0.01
155 1 0.00
156 2 0.01
157 60 0.16
158 113 0.31
159 173 0.48
160 9 0.02
161 1 0.00
162 2 0.01
ACGTcount: A:0.37, C:0.15, G:0.19, T:0.29
Consensus pattern (159 bp):
ATTTAAGGCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAA
AAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACCAAAAGAATG
AAGACTTTACAAGAATCCATGTTTGTCTC
Found at i:15611 original size:395 final size:395
Alignment explanation
Indices: 14842--15617 Score: 1171
Period size: 395 Copynumber: 2.0 Consensus size: 395
14832 CAAGAATCGA
* *
14842 GGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
1 GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
* *
14907 GCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
66 GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
* * * *
14972 AAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAG
131 AAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC
* * * * *
15037 AAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCTATTCAAATGAG
196 AAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGAG
* * *
15102 AAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTA
261 AAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTA
15167 ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
326 ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
15232 AACGT
391 AACGT
*
15237 GGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
1 GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
* * ** *
15302 GCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTTATAGTGTCTAATGACC
66 GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCA-C
* * *
15367 AAAA-GAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCACGAACTTAGACTTTA
130 AAAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTA
* * * *
15431 CAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATATGATGTATCCTAATGA
195 CAAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGA
* **
15496 GGAGACTACG-TTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCT-TGAGTATTCATGTTTG
260 GAAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAG-TATGAGTATTCATGTTTG
** * * *
15559 TCGTATTTAAGAGACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTT
324 TAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAA-AAAAGCTTTTCTT
15618 ACGACACCAA
Statistics
Matches: 341, Mismatches: 37, Indels: 6
0.89 0.10 0.02
Matches are distributed among these distances:
394 87 0.26
395 249 0.73
396 5 0.01
ACGTcount: A:0.36, C:0.14, G:0.19, T:0.31
Consensus pattern (395 bp):
GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
AAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC
AAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGAG
AAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTA
ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
AACGT
Found at i:15896 original size:159 final size:159
Alignment explanation
Indices: 15247--15897 Score: 416
Period size: 159 Copynumber: 4.1 Consensus size: 159
15237 GGCTTGCCTT
* * * *
15247 ATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGG-GCAAAGAAAAGATTTTCATGCAAAAGAA
1 ATTTAAGGCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAA
* * * ** *
15311 AATCATCAATATCATATATCCTATTGAGGAGAATGTGTTTATAGTGTCTAATGACCAAAAGAATG
66 AAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACCAAAAGAATG
* *
15376 AATATCATTACAAGAATCCATGTTTGTCTC
131 AAGA-CTTTACAAGAATCCATGTTTGTCTC
* * * * * * ** * *
15406 ATTTGAGTCACGAACTTAGACTTTACA--AAAATTGGTAG-GAA-AAAAGCCTTTCCTGCGAAAC
1 ATTTAAGGCACGAACTTTGATTTTA-AGGAAAATAGGT-GCAAAGAAAAGATTTTCATGCAAAAC
* * * * ** * * *
15467 CAAAGCGTCAATATGATGTATCCTAATGAGGAGACTACG-TTATGGTGCCTAATC-CTGAAAAGA
64 AAAAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCAC-CAAAAGA
** * * *
15530 ATGGGGA--TTAGCTTGAGTATTCATGTTTGTCGT-
128 ATGAAGACTTTA-C--AAGAATCCATGTTTGTC-TC
* *** * * * * * * * *
15563 ATTTAAGAG-ACAAACTTTGATTTTATCCAAAA-CGGTGGAAAGAAAAGCTTTTCTTACGACACC
1 ATTTAAG-GCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACA
* * * * **
15626 AAAGCATCAATATCATGCATCCTAATGAAGG-GAATGTGTTT-TGGCATCCAAATCATGAAAAGA
65 AAAGCATCAATATCATGTATCCTAATG-AGGAGAATGTGTTTATAGTA-CCTAATCACCAAAAGA
* * * * * * *
15689 ATGGAGACTGCTACAAGAATCGAGGCTTGCCTT
128 ATGAAGACT-TTACAAGAATCCATGTTTGTCTC
* * * *
15722 ATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGG-GCAAAGAAAAGATTTTCATGCAAAATAA
1 ATTTAAGGCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAA
* * * *
15786 AATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCA-CAAAATGAAC
66 AAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACCAAAA-GAAT
* *
15850 GAAGATCTTTACTAGGATCCATGTTTGTCTC
130 GAAGA-CTTTACAAGAATCCATGTTTGTCTC
*
15881 ATTTGAGGCACGAACTT
1 ATTTAAGGCACGAACTT
15898 AGACTTTAGA
Statistics
Matches: 364, Mismatches: 101, Indels: 54
0.70 0.19 0.10
Matches are distributed among these distances:
154 3 0.01
155 1 0.00
156 2 0.01
157 60 0.16
158 113 0.31
159 173 0.48
160 9 0.02
161 1 0.00
162 2 0.01
ACGTcount: A:0.37, C:0.15, G:0.19, T:0.29
Consensus pattern (159 bp):
ATTTAAGGCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAA
AAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACCAAAAGAATG
AAGACTTTACAAGAATCCATGTTTGTCTC
Found at i:16481 original size:395 final size:395
Alignment explanation
Indices: 15712--16487 Score: 1171
Period size: 395 Copynumber: 2.0 Consensus size: 395
15702 CAAGAATCGA
* *
15712 GGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
1 GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
* *
15777 GCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
66 GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
* * * *
15842 AAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAG
131 AAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC
* * * * *
15907 AAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCTATTCAAATGAG
196 AAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGAG
* * *
15972 AAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTA
261 AAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTA
16037 ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
326 ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
16102 AACGT
391 AACGT
*
16107 GGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
1 GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
* * ** *
16172 GCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTTATAGTGTCTAATGACC
66 GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCA-C
* * *
16237 AAAA-GAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCACGAACTTAGACTTTA
130 AAAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTA
* * * *
16301 CAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATATGATGTATCCTAATGA
195 CAAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGA
* **
16366 GGAGACTACG-TTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCT-TGAGTATTCATGTTTG
260 GAAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAG-TATGAGTATTCATGTTTG
** * * *
16429 TCGTATTTAAGAGACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTT
324 TAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAA-AAAAGCTTTTCTT
16488 ACGACACCAA
Statistics
Matches: 341, Mismatches: 37, Indels: 6
0.89 0.10 0.02
Matches are distributed among these distances:
394 87 0.26
395 249 0.73
396 5 0.01
ACGTcount: A:0.36, C:0.14, G:0.19, T:0.31
Consensus pattern (395 bp):
GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
AAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC
AAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGAG
AAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTA
ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
AACGT
Found at i:16709 original size:159 final size:158
Alignment explanation
Indices: 16107--16709 Score: 386
Period size: 159 Copynumber: 3.8 Consensus size: 158
16097 CCCCAAACGT
* * *
16107 GGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGG-GCAAAGAAAAGATTTTCA
1 GGCTTGCCTTATTTAAGAGACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCA
* * * * ** * *
16171 TGCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTTATAGTGTCTAATGAC
66 TGCAAAACAAAAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCAT
* * *
16236 CAAAAGAATGAATAT-CATTACAAGAATCCA
131 GAAAAGAATGGAGATGC--TACAAGAAT-CA
* * * * * ** * * * * **
16266 TGTTTGTCTCATTTGAGTCACGAACTTAGACTTTACA--AAAATTGGTAG-GAA-AAAAGCCTTT
1 GGCTTGCCTTATTTAAGAGACGAACTTTGATTTTA-AGGAAAATAGGT-GCAAAGAAAAGATTTT
* * * * * * ** * *
16327 CCTGCGAAACCAAAGCGTCAATATGATGTATCCTAATGAGGAGACTACG-TTATGGTGCCTAATC
64 CATGCAAAACAAAAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATC
* * ** *
16391 CTGAAAAGAATGGGGATTAGCT-TGAGTATTCA
129 ATGAAAAGAATGGAGA-T-GCTACAAG-AATCA
* * * * * *** * * * *
16423 TGTTTGTCGTATTTAAGAGACAAACTTTGATTTTATCCAAAA-CGGTGGAAAGAAAAGCTTTTCT
1 GGCTTGCCTTATTTAAGAGACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCA
* * * * * * * * *
16487 TACGACACCAAAGCATCAATATCATGCATCCTAATGAAGG-GAATGTATTT-TGGCATCCAAATC
66 TGCAAAACAAAAGCATCAATATCATGTATCCTAATG-AGGAGAATGTGTTTATAGTA-CCTAATC
16550 ATGAAAAGAATGGAGACTGCTACAAGAATCGA
129 ATGAAAAGAATGGAGA-TGCTACAAGAATC-A
*
16582 GGCTTGCCTTATTTAA-AGGATGAACTTTGATTTTAAGGAAAATAGG-GCAAAGAAAAGATTTTC
1 GGCTTGCCTTATTTAAGA-GACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTC
* * * *
16645 ATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCA
65 ATGCAAAACAAAAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCA
16710 CAAAATGAAC
Statistics
Matches: 328, Mismatches: 96, Indels: 40
0.71 0.21 0.09
Matches are distributed among these distances:
156 1 0.00
157 58 0.18
158 116 0.35
159 145 0.44
160 8 0.02
ACGTcount: A:0.37, C:0.14, G:0.19, T:0.29
Consensus pattern (158 bp):
GGCTTGCCTTATTTAAGAGACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCA
TGCAAAACAAAAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCAT
GAAAAGAATGGAGATGCTACAAGAATCA
Found at i:17351 original size:395 final size:395
Alignment explanation
Indices: 16582--17357 Score: 1189
Period size: 395 Copynumber: 2.0 Consensus size: 395
16572 CAAGAATCGA
*
16582 GGCTTGCCTTATTTAAAGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
1 GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
* *
16647 GCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
66 GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
* * * *
16712 AAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAG
131 AAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC
* * * * *
16777 AAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCTATTCAAATGAG
196 AAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGAG
* * *
16842 AAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTC
261 AAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTC
16907 ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
326 ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
16972 AACGT
391 AACGT
*
16977 GGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
1 GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
* * ** *
17042 GCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTTATAGTGTCTAATGACC
66 GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCA-C
* * *
17107 AAAA-GAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCACGAACTTAGACTTTA
130 AAAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTA
* * * *
17171 CAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATATGATGTATCCTAATGA
195 CAAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGA
* **
17236 GGAGACTACG-TTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCT-TGAGTATTCATGTTTG
260 GAAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAG-TATGAGTATTCATGTTTG
* * * *
17299 TCGTATTTAAGAGACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTT
324 TCATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAA-AAAAGCTTTTCTT
17358 ACGACACCAA
Statistics
Matches: 343, Mismatches: 35, Indels: 6
0.89 0.09 0.02
Matches are distributed among these distances:
394 88 0.26
395 250 0.73
396 5 0.01
ACGTcount: A:0.36, C:0.14, G:0.19, T:0.31
Consensus pattern (395 bp):
GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
AAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC
AAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGAG
AAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTC
ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
AACGT
Found at i:17636 original size:159 final size:159
Alignment explanation
Indices: 16987--17637 Score: 416
Period size: 159 Copynumber: 4.1 Consensus size: 159
16977 GGCTTGCCTT
* * * *
16987 ATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGG-GCAAAGAAAAGATTTTCATGCAAAAGAA
1 ATTTAAGGCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAA
* * * ** *
17051 AATCATCAATATCATATATCCTATTGAGGAGAATGTGTTTATAGTGTCTAATGACCAAAAGAATG
66 AAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACCAAAAGAATG
* *
17116 AATATCATTACAAGAATCCATGTTTGTCTC
131 AAGA-CTTTACAAGAATCCATGTTTGTCTC
* * * * * * ** * *
17146 ATTTGAGTCACGAACTTAGACTTTACA--AAAATTGGTAG-GAA-AAAAGCCTTTCCTGCGAAAC
1 ATTTAAGGCACGAACTTTGATTTTA-AGGAAAATAGGT-GCAAAGAAAAGATTTTCATGCAAAAC
* * * * ** * * *
17207 CAAAGCGTCAATATGATGTATCCTAATGAGGAGACTACG-TTATGGTGCCTAATC-CTGAAAAGA
64 AAAAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCAC-CAAAAGA
** * * *
17270 ATGGGGA--TTAGCTTGAGTATTCATGTTTGTCGT-
128 ATGAAGACTTTA-C--AAGAATCCATGTTTGTC-TC
* *** * * * * * * * *
17303 ATTTAAGAG-ACAAACTTTGATTTTATCCAAAA-CGGTGGAAAGAAAAGCTTTTCTTACGACACC
1 ATTTAAG-GCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACA
* * * * **
17366 AAAGCATCAATATCATGCATCCTAATGAAGG-GAATGTGTTT-TGGCATCCAAATCATGAAAAGA
65 AAAGCATCAATATCATGTATCCTAATG-AGGAGAATGTGTTTATAGTA-CCTAATCACCAAAAGA
* * * * * * *
17429 ATGGAGACTGCTACAAGAATCGAGGCTTGCCTT
128 ATGAAGACT-TTACAAGAATCCATGTTTGTCTC
* * * *
17462 ATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGG-GCAAAGAAAAGATTTTCATGCAAAATAA
1 ATTTAAGGCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAA
* * * *
17526 AATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCA-CAAAATGAAC
66 AAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACCAAAA-GAAT
* *
17590 GAAGATCTTTACTAGGATCCATGTTTGTCTC
130 GAAGA-CTTTACAAGAATCCATGTTTGTCTC
*
17621 ATTTGAGGCACGAACTT
1 ATTTAAGGCACGAACTT
17638 AGACTTTAGA
Statistics
Matches: 364, Mismatches: 101, Indels: 54
0.70 0.19 0.10
Matches are distributed among these distances:
154 3 0.01
155 1 0.00
156 2 0.01
157 60 0.16
158 113 0.31
159 173 0.48
160 9 0.02
161 1 0.00
162 2 0.01
ACGTcount: A:0.37, C:0.15, G:0.19, T:0.29
Consensus pattern (159 bp):
ATTTAAGGCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAA
AAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACCAAAAGAATG
AAGACTTTACAAGAATCCATGTTTGTCTC
Found at i:17903 original size:475 final size:473
Alignment explanation
Indices: 16977--17844 Score: 1256
Period size: 475 Copynumber: 1.8 Consensus size: 473
16967 CCCCAAACGT
*
16977 GGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
1 GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
* * ** *
17042 GCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTTATAGTGTCTAATGACC
66 GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACC
* * *
17107 AAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCACGAACTTAGACTTTAC
131 AAAAGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC
* * * *
17172 AAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATATGATGTATCCTAATGAG
196 AAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGAG
* ** **
17237 GAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGAGTATTCATGTTTGTCG
261 AAGACTACGTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAGCTTGAGTATTCATGTTTGTAA
* * * *
17302 TATTTAAGAGACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCA
326 TATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAGAAAAGCTTTTCTTACAACACCA
* * * * * *
17367 AAGCATCAATATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATG
391 AA-CATCAATAGCATGCA-CCTAATGAAGGGAATGTGTATTGGAAGCAAAATCAAGAAAAGAATG
17432 GAGACTGCTACAAGAATCGA
454 GAGACTGCTACAAGAATCGA
* *
17452 GGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
1 GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
* *
17517 GCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCA-C
66 GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACC
* * *
17581 AAAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTA
131 AAAA-GAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTA
* * * * * *
17646 GAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCTATTCAAATGA
195 CAAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGA
* * *
17711 GAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAG-TATGAGTATTCATGTTTG
260 GAAGACTACG-TTATGGTGCCTAATCCTGAAAAGAACAGGGATTAGCT-TGAGTATTCATGTTTG
* *
17775 TAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAA-AAAAGCTTTTCTTGCAACC
323 TAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAGAAAAGCTTTTCTTACAACA
17839 CCAAAC
388 CCAAAC
17845 GTGGCTTGCC
Statistics
Matches: 350, Mismatches: 40, Indels: 7
0.88 0.10 0.02
Matches are distributed among these distances:
474 6 0.02
475 257 0.73
476 87 0.25
ACGTcount: A:0.37, C:0.15, G:0.19, T:0.30
Consensus pattern (473 bp):
GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACC
AAAAGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC
AAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGAG
AAGACTACGTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAGCTTGAGTATTCATGTTTGTAA
TATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAGAAAAGCTTTTCTTACAACACCA
AACATCAATAGCATGCACCTAATGAAGGGAATGTGTATTGGAAGCAAAATCAAGAAAAGAATGGA
GACTGCTACAAGAATCGA
Found at i:18505 original size:159 final size:159
Alignment explanation
Indices: 17857--18506 Score: 416
Period size: 159 Copynumber: 4.1 Consensus size: 159
17847 GGCTTGCCTT
* * *
17857 ATTTAAGG-ATGAACTTTGATTGTAAGGAAAATAGG-GCAAAGAAAAGATTTTCATGCAAAAGAA
1 ATTTAAGGCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAA
* * * ** *
17920 AATCATCAATATCATATATCCTATTGAGGAGAATGTGTTTATAGTGTCTAATGACCAAAAGAATG
66 AAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACCAAAAGAATG
* *
17985 AATATCATTACAAGAATCCATGTTTGTCTC
131 AAGA-CTTTACAAGAATCCATGTTTGTCTC
* * * * * * ** * *
18015 ATTTGAGTCACGAACTTAGACTTTACA--AAAATTGGTAG-GAA-AAAAGCCTTTCCTGCGAAAC
1 ATTTAAGGCACGAACTTTGATTTTA-AGGAAAATAGGT-GCAAAGAAAAGATTTTCATGCAAAAC
* * * * ** * * *
18076 CAAAGCGTCAATATGATGTATCCTAATGAGGAGACTACG-TTATGGTGCCTAATC-CTGAAAAGA
64 AAAAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCAC-CAAAAGA
** * * *
18139 ATGGGGA--TTAGCTTGAGTATTCATGTTTGTCGT-
128 ATGAAGACTTTA-C--AAGAATCCATGTTTGTC-TC
* *** * * * * * * * *
18172 ATTTAAGAG-ACAAACTTTGATTTTATCCAAAA-CGGTGGAAAGAAAAGCTTTTCTTACGACACC
1 ATTTAAG-GCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACA
* * * * **
18235 AAAGCATCAATATCATGCATCCTAATGAAGG-GAATGTGTTT-TGGCATCCAAATCATGAAAAGA
65 AAAGCATCAATATCATGTATCCTAATG-AGGAGAATGTGTTTATAGTA-CCTAATCACCAAAAGA
* * * * * * *
18298 ATGGAGACTGCTACAAGAATCGAGGCTTGCCTT
128 ATGAAGACT-TTACAAGAATCCATGTTTGTCTC
* * * *
18331 ATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGG-GCAAAGAAAAGATTTTCATGCAAAATAA
1 ATTTAAGGCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAA
* * * *
18395 AATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCA-CAAAATGAAC
66 AAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACCAAAA-GAAT
* *
18459 GAAGATCTTTACTAGGATCCATGTTTGTCTC
130 GAAGA-CTTTACAAGAATCCATGTTTGTCTC
*
18490 ATTTGAGGCACGAACTT
1 ATTTAAGGCACGAACTT
18507 AGACTTTTGA
Statistics
Matches: 364, Mismatches: 100, Indels: 55
0.70 0.19 0.11
Matches are distributed among these distances:
154 3 0.01
155 1 0.00
156 2 0.01
157 60 0.16
158 119 0.33
159 167 0.46
160 9 0.02
161 1 0.00
162 2 0.01
ACGTcount: A:0.37, C:0.15, G:0.19, T:0.30
Consensus pattern (159 bp):
ATTTAAGGCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAA
AAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACCAAAAGAATG
AAGACTTTACAAGAATCCATGTTTGTCTC
Found at i:19090 original size:395 final size:395
Alignment explanation
Indices: 18321--19096 Score: 1162
Period size: 395 Copynumber: 2.0 Consensus size: 395
18311 CAAGAATCGA
* *
18321 GGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
1 GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
* *
18386 GCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
66 GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
* * * **
18451 AAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTTG
131 AAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC
* * * * *
18516 AAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCTATTCAAATGAG
196 AAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGAG
* * *
18581 AAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTA
261 AAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTA
18646 ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
326 ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
18711 AACGT
391 AACGT
*
18716 GGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
1 GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
* * ** *
18781 GCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTTATAGTGTCTAATGACC
66 GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCA-C
* * *
18846 AAAA-GAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCACGAACTTAGACTTTA
130 AAAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTA
* * * *
18910 CAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATATGATGTATCCTAATGA
195 CAAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGA
* **
18975 GGAGACTACG-TTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCT-TGAGTATTCATGTTTG
260 GAAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAG-TATGAGTATTCATGTTTG
** * * *
19038 TCGTATTTAAGAGACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTT
324 TAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAA-AAAAGCTTTTCTT
19097 ACGACACCAA
Statistics
Matches: 340, Mismatches: 38, Indels: 6
0.89 0.10 0.02
Matches are distributed among these distances:
394 87 0.26
395 248 0.73
396 5 0.01
ACGTcount: A:0.36, C:0.14, G:0.19, T:0.31
Consensus pattern (395 bp):
GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
AAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC
AAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGAG
AAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTA
ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
AACGT
Found at i:19375 original size:159 final size:159
Alignment explanation
Indices: 18726--19376 Score: 416
Period size: 159 Copynumber: 4.1 Consensus size: 159
18716 GGCTTGCCTT
* * * *
18726 ATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGG-GCAAAGAAAAGATTTTCATGCAAAAGAA
1 ATTTAAGGCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAA
* * * ** *
18790 AATCATCAATATCATATATCCTATTGAGGAGAATGTGTTTATAGTGTCTAATGACCAAAAGAATG
66 AAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACCAAAAGAATG
* *
18855 AATATCATTACAAGAATCCATGTTTGTCTC
131 AAGA-CTTTACAAGAATCCATGTTTGTCTC
* * * * * * ** * *
18885 ATTTGAGTCACGAACTTAGACTTTACA--AAAATTGGTAG-GAA-AAAAGCCTTTCCTGCGAAAC
1 ATTTAAGGCACGAACTTTGATTTTA-AGGAAAATAGGT-GCAAAGAAAAGATTTTCATGCAAAAC
* * * * ** * * *
18946 CAAAGCGTCAATATGATGTATCCTAATGAGGAGACTACG-TTATGGTGCCTAATC-CTGAAAAGA
64 AAAAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCAC-CAAAAGA
** * * *
19009 ATGGGGA--TTAGCTTGAGTATTCATGTTTGTCGT-
128 ATGAAGACTTTA-C--AAGAATCCATGTTTGTC-TC
* *** * * * * * * * *
19042 ATTTAAGAG-ACAAACTTTGATTTTATCCAAAA-CGGTGGAAAGAAAAGCTTTTCTTACGACACC
1 ATTTAAG-GCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACA
* * * * **
19105 AAAGCATCAATATCATGCATCCTAATGAAGG-GAATGTGTTT-TGGCATCCAAATCATGAAAAGA
65 AAAGCATCAATATCATGTATCCTAATG-AGGAGAATGTGTTTATAGTA-CCTAATCACCAAAAGA
* * * * * * *
19168 ATGGAGACTGCTACAAGAATCGAGGCTTGCCTT
128 ATGAAGACT-TTACAAGAATCCATGTTTGTCTC
* * * *
19201 ATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGG-GCAAAGAAAAGATTTTCATGCAAAATAA
1 ATTTAAGGCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAA
* * * *
19265 AATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCA-CAAAATGAAC
66 AAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACCAAAA-GAAT
* *
19329 GAAGATCTTTACTAGGATCCATGTTTGTCTC
130 GAAGA-CTTTACAAGAATCCATGTTTGTCTC
*
19360 ATTTGAGGCACGAACTT
1 ATTTAAGGCACGAACTT
19377 AGACTTTAGA
Statistics
Matches: 364, Mismatches: 101, Indels: 54
0.70 0.19 0.10
Matches are distributed among these distances:
154 3 0.01
155 1 0.00
156 2 0.01
157 60 0.16
158 113 0.31
159 173 0.48
160 9 0.02
161 1 0.00
162 2 0.01
ACGTcount: A:0.37, C:0.15, G:0.19, T:0.29
Consensus pattern (159 bp):
ATTTAAGGCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAA
AAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACCAAAAGAATG
AAGACTTTACAAGAATCCATGTTTGTCTC
Found at i:19960 original size:395 final size:395
Alignment explanation
Indices: 19191--19966 Score: 1171
Period size: 395 Copynumber: 2.0 Consensus size: 395
19181 CAAGAATCGA
* *
19191 GGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
1 GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
* *
19256 GCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
66 GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
* * * *
19321 AAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAG
131 AAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC
* * * * *
19386 AAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCTATTCAAATGAG
196 AAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGAG
* * *
19451 AAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTA
261 AAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTA
19516 ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
326 ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
19581 AACGT
391 AACGT
*
19586 GGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
1 GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
* * ** *
19651 GCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTTATAGTGTCTAATGACC
66 GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCA-C
* * *
19716 AAAA-GAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCACGAACTTAGACTTTA
130 AAAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTA
* * * *
19780 CAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATATGATGTATCCTAATGA
195 CAAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGA
* **
19845 GGAGACTACG-TTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCT-TGAGTATTCATGTTTG
260 GAAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAG-TATGAGTATTCATGTTTG
** * * *
19908 TCGTATTTAAGAGACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTT
324 TAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAA-AAAAGCTTTTCTT
19967 ACGACACCAA
Statistics
Matches: 341, Mismatches: 37, Indels: 6
0.89 0.10 0.02
Matches are distributed among these distances:
394 87 0.26
395 249 0.73
396 5 0.01
ACGTcount: A:0.36, C:0.14, G:0.19, T:0.31
Consensus pattern (395 bp):
GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
AAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC
AAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGAG
AAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTA
ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
AACGT
Found at i:20245 original size:159 final size:159
Alignment explanation
Indices: 19596--20246 Score: 425
Period size: 159 Copynumber: 4.1 Consensus size: 159
19586 GGCTTGCCTT
* * * *
19596 ATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGG-GCAAAGAAAAGATTTTCATGCAAAAGAA
1 ATTTAAGGCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAA
* * * ** *
19660 AATCATCAATATCATATATCCTATTGAGGAGAATGTGTTTATAGTGTCTAATGACCAAAAGAATG
66 AAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACCAAAAGAATG
* *
19725 AATATCATTACAAGAATCCATGTTTGTCTC
131 AAGA-CTTTACAAGAATCCATGTTTGTCTC
* * * * * * ** * *
19755 ATTTGAGTCACGAACTTAGACTTTACA--AAAATTGGTAG-GAA-AAAAGCCTTTCCTGCGAAAC
1 ATTTAAGGCACGAACTTTGATTTTA-AGGAAAATAGGT-GCAAAGAAAAGATTTTCATGCAAAAC
* * * * ** * * *
19816 CAAAGCGTCAATATGATGTATCCTAATGAGGAGACTACG-TTATGGTGCCTAATC-CTGAAAAGA
64 AAAAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCAC-CAAAAGA
** * * *
19879 ATGGGGA--TTAGCTTGAGTATTCATGTTTGTCGT-
128 ATGAAGACTTTA-C--AAGAATCCATGTTTGTC-TC
* *** * * * * * * * *
19912 ATTTAAGAG-ACAAACTTTGATTTTATCCAAAA-CGGTGGAAAGAAAAGCTTTTCTTACGACACC
1 ATTTAAG-GCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACA
* * * * **
19975 AAAGCATCAATATCATGCATCCTAATGAAGG-GAATGTGTTT-TGGCATCCAAATCATGAAAAGA
65 AAAGCATCAATATCATGTATCCTAATG-AGGAGAATGTGTTTATAGTA-CCTAATCACCAAAAGA
* * * * * * *
20038 ATGGAGACTGCTACAAGAATCGAGGCTTGCCTT
128 ATGAAGACT-TTACAAGAATCCATGTTTGTCTC
* * * *
20071 ATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGG-GCAAAGAAAAGATTTTCATGCAAAATAA
1 ATTTAAGGCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAA
* * * *
20135 AATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCA-CAAAATGAAC
66 AAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACCAAAA-GAAT
*
20199 GAAGATCTTTACTAGAATCCATGTTTGTCTC
130 GAAGA-CTTTACAAGAATCCATGTTTGTCTC
*
20230 ATTTGAGGCACGAACTT
1 ATTTAAGGCACGAACTT
20247 AGACTTTAGA
Statistics
Matches: 365, Mismatches: 100, Indels: 54
0.70 0.19 0.10
Matches are distributed among these distances:
154 3 0.01
155 1 0.00
156 2 0.01
157 60 0.16
158 113 0.31
159 174 0.48
160 9 0.02
161 1 0.00
162 2 0.01
ACGTcount: A:0.37, C:0.15, G:0.19, T:0.29
Consensus pattern (159 bp):
ATTTAAGGCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAA
AAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACCAAAAGAATG
AAGACTTTACAAGAATCCATGTTTGTCTC
Found at i:20830 original size:395 final size:395
Alignment explanation
Indices: 20061--20836 Score: 1189
Period size: 395 Copynumber: 2.0 Consensus size: 395
20051 CAAGAATCGA
* *
20061 GGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
1 GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
*
20126 GCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
66 GCAAAAGAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
* * *
20191 AAATGAACGAAGATCTTTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAG
131 AAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC
* * * * *
20256 AAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCTATTCAAATGAG
196 AAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGAG
* * *
20321 AAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTA
261 AAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTA
20386 ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
326 ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
20451 AACGT
391 AACGT
*
20456 GGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
1 GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
* * ** *
20521 GCAAAAGAAAATCATCAATATCATTTATCCTATTGAGGAGAATGTGTTTATAGTGTCTAATGACC
66 GCAAAAGAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCA-C
* * *
20586 AAAA-GAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCACGAACTTAGACTTTA
130 AAAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTA
* * * *
20650 CAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATATGATGTATCCTAATGA
195 CAAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGA
* **
20715 GGAGACTACG-TTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCT-TGAGTATTCATGTTTG
260 GAAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAG-TATGAGTATTCATGTTTG
** * * *
20778 TCGTATTTAAGAGACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTT
324 TAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAA-AAAAGCTTTTCTT
20837 ACGACACCAA
Statistics
Matches: 343, Mismatches: 35, Indels: 6
0.89 0.09 0.02
Matches are distributed among these distances:
394 87 0.25
395 251 0.73
396 5 0.01
ACGTcount: A:0.36, C:0.14, G:0.18, T:0.31
Consensus pattern (395 bp):
GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
GCAAAAGAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
AAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC
AAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGAG
AAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTA
ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
AACGT
Found at i:21115 original size:159 final size:159
Alignment explanation
Indices: 20466--21116 Score: 416
Period size: 159 Copynumber: 4.1 Consensus size: 159
20456 GGCTTGCCTT
* * * *
20466 ATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGG-GCAAAGAAAAGATTTTCATGCAAAAGAA
1 ATTTAAGGCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAA
* * * ** *
20530 AATCATCAATATCATTTATCCTATTGAGGAGAATGTGTTTATAGTGTCTAATGACCAAAAGAATG
66 AAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACCAAAAGAATG
* *
20595 AATATCATTACAAGAATCCATGTTTGTCTC
131 AAGA-CTTTACAAGAATCCATGTTTGTCTC
* * * * * * ** * *
20625 ATTTGAGTCACGAACTTAGACTTTACA--AAAATTGGTAG-GAA-AAAAGCCTTTCCTGCGAAAC
1 ATTTAAGGCACGAACTTTGATTTTA-AGGAAAATAGGT-GCAAAGAAAAGATTTTCATGCAAAAC
* * * * ** * * *
20686 CAAAGCGTCAATATGATGTATCCTAATGAGGAGACTACG-TTATGGTGCCTAATC-CTGAAAAGA
64 AAAAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCAC-CAAAAGA
** * * *
20749 ATGGGGA--TTAGCTTGAGTATTCATGTTTGTCGT-
128 ATGAAGACTTTA-C--AAGAATCCATGTTTGTC-TC
* *** * * * * * * * *
20782 ATTTAAGAG-ACAAACTTTGATTTTATCCAAAA-CGGTGGAAAGAAAAGCTTTTCTTACGACACC
1 ATTTAAG-GCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACA
* * * * **
20845 AAAGCATCAATATCATGCATCCTAATGAAGG-GAATGTGTTT-TGGCATCCAAATCATGAAAAGA
65 AAAGCATCAATATCATGTATCCTAATG-AGGAGAATGTGTTTATAGTA-CCTAATCACCAAAAGA
* * * * * * *
20908 ATGGAGACTGCTACAAGAATCGAGGCTTGCCTT
128 ATGAAGACT-TTACAAGAATCCATGTTTGTCTC
* * * *
20941 ATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGG-GCAAAGAAAAGATTTTCATGCAAAATAA
1 ATTTAAGGCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAA
* * * *
21005 AATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCA-CAAAATGAAC
66 AAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACCAAAA-GAAT
* *
21069 GAAGATCTTTACTAGGATCCATGTTTGTCTC
130 GAAGA-CTTTACAAGAATCCATGTTTGTCTC
*
21100 ATTTGAGGCACGAACTT
1 ATTTAAGGCACGAACTT
21117 AGACTTTAGA
Statistics
Matches: 364, Mismatches: 101, Indels: 54
0.70 0.19 0.10
Matches are distributed among these distances:
154 3 0.01
155 1 0.00
156 2 0.01
157 60 0.16
158 113 0.31
159 173 0.48
160 9 0.02
161 1 0.00
162 2 0.01
ACGTcount: A:0.37, C:0.15, G:0.19, T:0.30
Consensus pattern (159 bp):
ATTTAAGGCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAA
AAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACCAAAAGAATG
AAGACTTTACAAGAATCCATGTTTGTCTC
Found at i:21700 original size:395 final size:395
Alignment explanation
Indices: 20931--21706 Score: 1171
Period size: 395 Copynumber: 2.0 Consensus size: 395
20921 CAAGAATCGA
* *
20931 GGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
1 GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
* *
20996 GCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
66 GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
* * * *
21061 AAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAG
131 AAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC
* * * * *
21126 AAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCTATTCAAATGAG
196 AAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGAG
* * *
21191 AAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTA
261 AAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTA
21256 ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
326 ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
21321 AACGT
391 AACGT
*
21326 GGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
1 GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
* * ** *
21391 GCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTTATAGTGTCTAATGACC
66 GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCA-C
* * *
21456 AAAA-GAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCACGAACTTAGACTTTA
130 AAAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTA
* * * *
21520 CAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATATGATGTATCCTAATGA
195 CAAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGA
* **
21585 GGAGACTACG-TTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCT-TGAGTATTCATGTTTG
260 GAAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAG-TATGAGTATTCATGTTTG
** * * *
21648 TCGTATTTAAGAGACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTT
324 TAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAA-AAAAGCTTTTCTT
21707 ACGACACCAA
Statistics
Matches: 341, Mismatches: 37, Indels: 6
0.89 0.10 0.02
Matches are distributed among these distances:
394 87 0.26
395 249 0.73
396 5 0.01
ACGTcount: A:0.36, C:0.14, G:0.19, T:0.31
Consensus pattern (395 bp):
GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
AAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC
AAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGAG
AAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTA
ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
AACGT
Found at i:21985 original size:159 final size:159
Alignment explanation
Indices: 21336--21986 Score: 425
Period size: 159 Copynumber: 4.1 Consensus size: 159
21326 GGCTTGCCTT
* * * *
21336 ATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGG-GCAAAGAAAAGATTTTCATGCAAAAGAA
1 ATTTAAGGCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAA
* * * ** *
21400 AATCATCAATATCATATATCCTATTGAGGAGAATGTGTTTATAGTGTCTAATGACCAAAAGAATG
66 AAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACCAAAAGAATG
* *
21465 AATATCATTACAAGAATCCATGTTTGTCTC
131 AAGA-CTTTACAAGAATCCATGTTTGTCTC
* * * * * * ** * *
21495 ATTTGAGTCACGAACTTAGACTTTACA--AAAATTGGTAG-GAA-AAAAGCCTTTCCTGCGAAAC
1 ATTTAAGGCACGAACTTTGATTTTA-AGGAAAATAGGT-GCAAAGAAAAGATTTTCATGCAAAAC
* * * * ** * * *
21556 CAAAGCGTCAATATGATGTATCCTAATGAGGAGACTACG-TTATGGTGCCTAATC-CTGAAAAGA
64 AAAAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCAC-CAAAAGA
** * * *
21619 ATGGGGA--TTAGCTTGAGTATTCATGTTTGTCGT-
128 ATGAAGACTTTA-C--AAGAATCCATGTTTGTC-TC
* *** * * * * * * * *
21652 ATTTAAGAG-ACAAACTTTGATTTTATCCAAAA-CGGTGGAAAGAAAAGCTTTTCTTACGACACC
1 ATTTAAG-GCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACA
* * * * **
21715 AAAGCATCAATATCATGCATCCTAATGAAGG-GAATGTGTTT-TGGCATCCAAATCATGAAAAGA
65 AAAGCATCAATATCATGTATCCTAATG-AGGAGAATGTGTTTATAGTA-CCTAATCACCAAAAGA
* * * * * * *
21778 ATGGAGACTGCTACAAGAATCGAGGCTTGCCTT
128 ATGAAGACT-TTACAAGAATCCATGTTTGTCTC
* * * *
21811 ATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGG-GCAAAGAAAAGATTTTCATGCAAAATAA
1 ATTTAAGGCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAA
* * * *
21875 AATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCA-CAAAATGAAC
66 AAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACCAAAA-GAAT
*
21939 GAAGATCTTTACTAGAATCCATGTTTGTCTC
130 GAAGA-CTTTACAAGAATCCATGTTTGTCTC
*
21970 ATTTGAGGCACGAACTT
1 ATTTAAGGCACGAACTT
21987 AGACTTTAGA
Statistics
Matches: 365, Mismatches: 100, Indels: 54
0.70 0.19 0.10
Matches are distributed among these distances:
154 3 0.01
155 1 0.00
156 2 0.01
157 60 0.16
158 113 0.31
159 174 0.48
160 9 0.02
161 1 0.00
162 2 0.01
ACGTcount: A:0.37, C:0.15, G:0.19, T:0.29
Consensus pattern (159 bp):
ATTTAAGGCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAA
AAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACCAAAAGAATG
AAGACTTTACAAGAATCCATGTTTGTCTC
Found at i:22252 original size:475 final size:473
Alignment explanation
Indices: 21326--22193 Score: 1265
Period size: 475 Copynumber: 1.8 Consensus size: 473
21316 CCCCAAACGT
*
21326 GGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
1 GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
* * ** *
21391 GCAAAAGAAAATCATCAATATCATATATCCTATTGAGGAGAATGTGTTTATAGTGTCTAATGACC
66 GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACC
* * *
21456 AAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCACGAACTTAGACTTTAC
131 AAAAGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC
* * * *
21521 AAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATATGATGTATCCTAATGAG
196 AAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGAG
* ** **
21586 GAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGAGTATTCATGTTTGTCG
261 AAGACTACGTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAGCTTGAGTATTCATGTTTGTAA
* * * *
21651 TATTTAAGAGACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCA
326 TATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAGAAAAGCTTTTCTTACCACACCA
* * * * * *
21716 AAGCATCAATATCATGCATCCTAATGAAGGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATG
391 AA-CATCAATAGCATGCA-CCTAATGAAGGGAATGTGTATTGGAAGCAAAATCAAGAAAAGAATG
21781 GAGACTGCTACAAGAATCGA
454 GAGACTGCTACAAGAATCGA
* *
21801 GGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
1 GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
* *
21866 GCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCA-C
66 GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACC
* *
21930 AAAATGAACGAAGATCTTTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTA
131 AAAA-GAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTA
* * * * * *
21995 GAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCTATTCAAATGA
195 CAAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGA
* * *
22060 GAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAG-TATGAGTATTCATGTTTG
260 GAAGACTACG-TTATGGTGCCTAATCCTGAAAAGAACAGGGATTAGCT-TGAGTATTCATGTTTG
* *
22124 TAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAA-AAAAGCTTTTCTTGCCACC
323 TAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAGAAAAGCTTTTCTTACCACA
22188 CCAAAC
388 CCAAAC
22194 GTGGCTTGCC
Statistics
Matches: 351, Mismatches: 39, Indels: 7
0.88 0.10 0.02
Matches are distributed among these distances:
474 6 0.02
475 258 0.74
476 87 0.25
ACGTcount: A:0.37, C:0.15, G:0.19, T:0.30
Consensus pattern (473 bp):
GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
GCAAAAGAAAATCATCAATATCATATATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACC
AAAAGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC
AAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGAG
AAGACTACGTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAGCTTGAGTATTCATGTTTGTAA
TATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAGAAAAGCTTTTCTTACCACACCA
AACATCAATAGCATGCACCTAATGAAGGGAATGTGTATTGGAAGCAAAATCAAGAAAAGAATGGA
GACTGCTACAAGAATCGA
Found at i:22852 original size:159 final size:159
Alignment explanation
Indices: 22206--22853 Score: 407
Period size: 159 Copynumber: 4.1 Consensus size: 159
22196 GGCTTGCCTT
* * *
22206 ATTTAAGG-ATGAACTTTGATTGTAAGGAAAATAGG-GCAAAGAAAAGATTTTCATGCAAAAGAA
1 ATTTAAGGCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAA
* * * ** *
22269 AATCATCAATATCATTTATCCTATTGAGGAGAATGTGTTTATAGTGTCTAATGACCAAAAGAATG
66 AAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACCAAAAGAATG
* *
22334 AATATCATTACAAGAATCCATGTTTGTCTC
131 AAGA-CTTTACAAGAATCCATGTTTGTCTC
* * * * * * ** * *
22364 ATTTGAGTCACGAACTTAGACTTTACA--AAAATTGGTAG-GAA-AAAAGCCTTTCCTGCGAAAC
1 ATTTAAGGCACGAACTTTGATTTTA-AGGAAAATAGGT-GCAAAGAAAAGATTTTCATGCAAAAC
* * * * ** * * *
22425 CAAAGCGTCAATATGATGTATCCTAATGAGGAGACTACG-TTATGGTGCCTAATC-CTGAAAAGA
64 AAAAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCAC-CAAAAGA
** * * *
22488 ATGGGGA--TTAGCTTGAGTATTCATG-TTGTCGT-
128 ATGAAGACTTTA-C--AAGAATCCATGTTTGTC-TC
* ** * * * * * * * *
22520 A-TTAAGAG-ACAAACTTTGATTTTATCGAAAA-CGGTGGAAAGAAAAGCTTTTCTTACGACACC
1 ATTTAAG-GCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACA
* * * * **
22582 AAAGCATCAATATCATGCATCCTAATGAAGG-GAATGTGTTT-TGGCATCCAAATCATGAAAAGA
65 AAAGCATCAATATCATGTATCCTAATG-AGGAGAATGTGTTTATAGTA-CCTAATCACCAAAAGA
* * * * * * *
22645 ATGGAGACTGCTACAAGAATCGAGGCTTGCCTT
128 ATGAAGACT-TTACAAGAATCCATGTTTGTCTC
* * * *
22678 ATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGG-GCAAAGAAAAGATTTTCATGCAAAATAA
1 ATTTAAGGCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAA
* * * *
22742 AATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCA-CAAAATGAAC
66 AAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACCAAAA-GAAT
* *
22806 GAAGATCTTTACTAGGATCCATGTTTGTCTC
130 GAAGA-CTTTACAAGAATCCATGTTTGTCTC
*
22837 ATTTGAGGCACGAACTT
1 ATTTAAGGCACGAACTT
22854 AGACTTTAGA
Statistics
Matches: 362, Mismatches: 98, Indels: 59
0.70 0.19 0.11
Matches are distributed among these distances:
154 4 0.01
155 23 0.06
156 59 0.16
157 62 0.17
158 70 0.19
159 133 0.37
160 11 0.03
ACGTcount: A:0.37, C:0.15, G:0.19, T:0.29
Consensus pattern (159 bp):
ATTTAAGGCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAA
AAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACCAAAAGAATG
AAGACTTTACAAGAATCCATGTTTGTCTC
Found at i:23437 original size:395 final size:395
Alignment explanation
Indices: 22668--23443 Score: 1180
Period size: 395 Copynumber: 2.0 Consensus size: 395
22658 CAAGAATCGA
* *
22668 GGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
1 GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
*
22733 GCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
66 GCAAAAGAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
* * * *
22798 AAATGAACGAAGATCTTTACTAGGATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAG
131 AAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC
* * * * *
22863 AAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCTATTCAAATGAG
196 AAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGAG
* * *
22928 AAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTA
261 AAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTA
22993 ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
326 ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
23058 AACGT
391 AACGT
*
23063 GGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
1 GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
* * ** *
23128 GCAAAAGAAAATCATCAATATCATTTATCCTATTGAGGAGAATGTGTTTATAGTGTCTAATGACC
66 GCAAAAGAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCA-C
* * *
23193 AAAA-GAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCACGAACTTAGACTTTA
130 AAAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTA
* * * *
23257 CAAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATATGATGTATCCTAATGA
195 CAAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGA
* **
23322 GGAGACTACG-TTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCT-TGAGTATTCATGTTTG
260 GAAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAG-TATGAGTATTCATGTTTG
** * * *
23385 TCGTATTTAAGAGACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTT
324 TAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAA-AAAAGCTTTTCTT
23444 ACGACACCAA
Statistics
Matches: 342, Mismatches: 36, Indels: 6
0.89 0.09 0.02
Matches are distributed among these distances:
394 87 0.25
395 250 0.73
396 5 0.01
ACGTcount: A:0.36, C:0.14, G:0.19, T:0.31
Consensus pattern (395 bp):
GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
GCAAAAGAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACA
AAATGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC
AAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGAG
AAGACTACGTTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAGTATGAGTATTCATGTTTGTA
ATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAAAAAGCTTTTCTTGCAACCCCA
AACGT
Found at i:23722 original size:159 final size:159
Alignment explanation
Indices: 23073--23723 Score: 416
Period size: 159 Copynumber: 4.1 Consensus size: 159
23063 GGCTTGCCTT
* * * *
23073 ATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGG-GCAAAGAAAAGATTTTCATGCAAAAGAA
1 ATTTAAGGCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAA
* * * ** *
23137 AATCATCAATATCATTTATCCTATTGAGGAGAATGTGTTTATAGTGTCTAATGACCAAAAGAATG
66 AAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACCAAAAGAATG
* *
23202 AATATCATTACAAGAATCCATGTTTGTCTC
131 AAGA-CTTTACAAGAATCCATGTTTGTCTC
* * * * * * ** * *
23232 ATTTGAGTCACGAACTTAGACTTTACA--AAAATTGGTAG-GAA-AAAAGCCTTTCCTGCGAAAC
1 ATTTAAGGCACGAACTTTGATTTTA-AGGAAAATAGGT-GCAAAGAAAAGATTTTCATGCAAAAC
* * * * ** * * *
23293 CAAAGCGTCAATATGATGTATCCTAATGAGGAGACTACG-TTATGGTGCCTAATC-CTGAAAAGA
64 AAAAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCAC-CAAAAGA
** * * *
23356 ATGGGGA--TTAGCTTGAGTATTCATGTTTGTCGT-
128 ATGAAGACTTTA-C--AAGAATCCATGTTTGTC-TC
* *** * * * * * * * *
23389 ATTTAAGAG-ACAAACTTTGATTTTATCCAAAA-CGGTGGAAAGAAAAGCTTTTCTTACGACACC
1 ATTTAAG-GCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACA
* * * * * **
23452 AAAGCATCAATATCATGCATCCTAATGAATG-GAATGTGTTT-TGGCATCCAAATCATGAAAAGA
65 AAAGCATCAATATCATGTATCCTAATG-AGGAGAATGTGTTTATAGTA-CCTAATCACCAAAAGA
* * * * * * *
23515 ATGGAGACTGCTACAAGAATCGAGGCTTGCCTT
128 ATGAAGACT-TTACAAGAATCCATGTTTGTCTC
* * * *
23548 ATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGG-GCAAAGAAAAGATTTTCATGCAAAATAA
1 ATTTAAGGCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAA
* * * *
23612 AATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCA-CAAAATGAAC
66 AAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACCAAAA-GAAT
*
23676 GAAGATCTTTACTAGAATCCATGTTTGTCTC
130 GAAGA-CTTTACAAGAATCCATGTTTGTCTC
*
23707 ATTTGAGGCACGAACTT
1 ATTTAAGGCACGAACTT
23724 AGACTTTTGA
Statistics
Matches: 363, Mismatches: 102, Indels: 54
0.70 0.20 0.10
Matches are distributed among these distances:
154 3 0.01
155 1 0.00
156 2 0.01
157 60 0.17
158 112 0.31
159 173 0.48
160 9 0.02
161 1 0.00
162 2 0.01
ACGTcount: A:0.37, C:0.15, G:0.19, T:0.30
Consensus pattern (159 bp):
ATTTAAGGCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAA
AAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACCAAAAGAATG
AAGACTTTACAAGAATCCATGTTTGTCTC
Found at i:23989 original size:475 final size:475
Alignment explanation
Indices: 23063--23929 Score: 1290
Period size: 475 Copynumber: 1.8 Consensus size: 475
23053 CCCCAAACGT
*
23063 GGCTTGCCTTATTTAAGGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
1 GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
* * ** *
23128 GCAAAAGAAAATCATCAATATCATTTATCCTATTGAGGAGAATGTGTTTATAGTGTCTAATGACC
66 GCAAAAGAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACC
* * *
23193 AAAAGAATGAATATCATTACAAGAATCCATGTTTGTCTCATTTGAGTCACGAACTTAGACTTTAC
131 AAAAGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC
* * * *
23258 AAAAATTGGTAGGAAAAAAGCCTTTCCTGCGAAACCAAAGCGTCAATATGATGTATCCTAATGAG
196 AAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGAG
* ** **
23323 GAGACTACGTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCTTGAGTATTCATGTTTGTCG
261 AAGACTACGTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAGCTTGAGTATTCATGTTTGTAA
* * * *
23388 TATTTAAGAGACAAACTTTGATTTTATCCAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCA
326 TATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAGAAAAGCTTTTCTTACCACACCA
* * * * *
23453 AAGCATCAATATCATGCATCCTAATGAATGGAATGTGTTTTGGCATCCAAATCATGAAAAGAATG
391 AAGCATCAATATCATGCATCCTAATGAATGGAATGTGTATTGGAAGCAAAATCAAGAAAAGAATG
23518 GAGACTGCTACAAGAATCGA
456 GAGACTGCTACAAGAATCGA
* *
23538 GGCTTGCCTTATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
1 GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
*
23603 GCAAAATAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCA-C
66 GCAAAAGAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACC
* * *
23667 AAAATGAACGAAGATCTTTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTT
131 AAAA-GAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTA
* * * * * *
23732 GAAAAATTGGTGGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCATTATGATCTATTCAAATGA
195 CAAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGA
* * *
23797 GAAGACTATGTTTATGGTGTCTAATCTTGAAAAGAACAGGGATTAG-TATGAGTATTCATGTTTG
260 GAAGACTACG-TTATGGTGCCTAATCCTGAAAAGAACAGGGATTAGCT-TGAGTATTCATGTTTG
* *
23861 TAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAA-AAAAGCTTTTCTTGCCACC
323 TAATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAGAAAAGCTTTTCTTACCACA
23925 CCAAA
388 CCAAA
23930 CGTGGCTTGC
Statistics
Matches: 350, Mismatches: 39, Indels: 6
0.89 0.10 0.02
Matches are distributed among these distances:
474 5 0.01
475 258 0.74
476 87 0.25
ACGTcount: A:0.37, C:0.15, G:0.18, T:0.30
Consensus pattern (475 bp):
GGCTTGCCTTATTTAAAGGATGAACTTTGATTGTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT
GCAAAAGAAAATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCACC
AAAAGAACGAAGATCATTACAAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC
AAAAATTGGTAGGAAAAAAGCCTTTCCTGCAAAACCAAAGCATCAATATGATCTATCCAAATGAG
AAGACTACGTTATGGTGCCTAATCCTGAAAAGAACAGGGATTAGCTTGAGTATTCATGTTTGTAA
TATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGCAAAGAAAAGCTTTTCTTACCACACCA
AAGCATCAATATCATGCATCCTAATGAATGGAATGTGTATTGGAAGCAAAATCAAGAAAAGAATG
GAGACTGCTACAAGAATCGA
Found at i:24591 original size:159 final size:159
Alignment explanation
Indices: 23943--24592 Score: 420
Period size: 159 Copynumber: 4.1 Consensus size: 159
23933 GGCTTGCCTT
* * *
23943 ATTTAAGG-ATGAACTTTGATTGTAAGGAAAATAGG-GCAAAGAAAAGATTTTCATGCAAAAGAA
1 ATTTAAGGCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAA
* * * ** *
24006 AATCATCAATATCATTTATCCTATTGAGGAGAATGTGTTTATAGTGTCTAATGACCAAAAGAATG
66 AAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACCAAAAGAATG
* *
24071 AATATCATTACAAGAATCCATGTTTGTCTC
131 AAGA-CTTTACAAGAATCCATGTTTGTCTC
* * * * * * ** * *
24101 ATTTGAGTCACGAACTTAGACTTTACA--AAAATTGGTAG-GAA-AAAAGCCTTTCCTGCGAAAC
1 ATTTAAGGCACGAACTTTGATTTTA-AGGAAAATAGGT-GCAAAGAAAAGATTTTCATGCAAAAC
* * * * ** * * *
24162 CAAAGCGTCAATATGATGTATCCTAATGAGGAGACTACG-TTATGGTGCCTAATC-CTGAAAAGA
64 AAAAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCAC-CAAAAGA
** * * *
24225 ATGGGGA--TTAGCTTGAGTATTCATGTTTGTCGT-
128 ATGAAGACTTTA-C--AAGAATCCATGTTTGTC-TC
* ** * ** * *
24258 ATTTAAGAG-ACAAACTTTGATTTTATCGAAAA-CGGTGGGAAGAAAAGCTTTTCTTATG--ACA
1 ATTTAAG-GCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTC--ATGCAAAA
* * * * * **
24319 CCAAAGCATCAATATCATGCATCCTAATGAAGG-GAATGTGTTT-TGGCATCCAAATCATGAAAA
63 CAAAAGCATCAATATCATGTATCCTAATG-AGGAGAATGTGTTTATAGTA-CCTAATCACCAAAA
* * * * * * *
24382 GAATGGAGACTGCTACAAGAATCGAGGCTTGCCTT
126 GAATGAAGACT-TTACAAGAATCCATGTTTGTCTC
* * * *
24417 ATTTAAAGTATGAACTTTGATTTTAAGGAAAATAGG-GCAAAGAAAAGATTTTCATGCAAAATAA
1 ATTTAAGGCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAA
* * * *
24481 AATCATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTACCTAATCA-CAAAATGAAC
66 AAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACCAAAA-GAAT
*
24545 GAAGATCTTTACTAGAATCCATGTTTGTCTC
130 GAAGA-CTTTACAAGAATCCATGTTTGTCTC
*
24576 ATTTGAGGCACGAACTT
1 ATTTAAGGCACGAACTT
24593 AGACTTTAGA
Statistics
Matches: 366, Mismatches: 94, Indels: 63
0.70 0.18 0.12
Matches are distributed among these distances:
154 3 0.01
155 1 0.00
156 2 0.01
157 64 0.17
158 116 0.32
159 166 0.45
160 11 0.03
161 1 0.00
162 2 0.01
ACGTcount: A:0.37, C:0.14, G:0.19, T:0.30
Consensus pattern (159 bp):
ATTTAAGGCACGAACTTTGATTTTAAGGAAAATAGGTGCAAAGAAAAGATTTTCATGCAAAACAA
AAGCATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACCAAAAGAATG
AAGACTTTACAAGAATCCATGTTTGTCTC
Done.