Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1357
Parameters: 2 7 7 80 10 50 1000
Length:  15732

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
38--110
20
3.6
20
81
3
101
36
13
17
31
1.89
55--131
21
3.7
21
77
6
86
42
11
16
28
1.84
38--131
41
2.3
41
94
3
163
39
12
18
29
1.88
170--195
13
2.0
13
100
0
52
38
15
15
30
1.88
4255--4285
15
2.1
15
93
0
53
48
16
22
12
1.80
6364--6402
13
3.0
13
96
0
69
30
17
15
35
1.91
8825--8897
20
3.6
20
81
3
101
36
13
17
31
1.89
8842--8918
21
3.7
21
77
6
86
42
11
16
28
1.84
8825--8918
41
2.3
41
94
3
163
39
12
18
29
1.88
8957--8982
13
2.0
13
100
0
52
38
15
15
30
1.88
10144--10169
13
2.0
13
100
0
52
38
15
15
30
1.88
12386--12429
20
2.2
20
83
4
52
52
4
20
22
1.65
14231--14269
15
2.6
15
91
0
60
51
15
20
12
1.76

Tables:   1

The End!