Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1365
Parameters: 2 7 7 80 10 50 1000
Length:  36839

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25--58
17
1.9
18
88
5
52
70
0
14
14
1.17
4788--4845
29
2.0
29
100
0
116
27
24
10
37
1.88
6693--6723
5
6.2
5
100
0
62
0
38
22
38
1.54
7695--7782
43
2.1
40
81
14
97
50
0
1
48
1.08
8952--9010
13
4.0
13
73
26
55
32
18
15
33
1.92
8953--9031
33
2.4
32
100
0
140
32
20
15
31
1.93
8966--9030
20
3.6
20
73
26
81
33
21
15
29
1.94
9019--9070
20
2.7
20
81
3
61
32
13
15
38
1.86
9100--9166
20
3.7
19
74
25
74
31
13
19
35
1.90
9116--9145
13
2.3
13
94
0
51
36
16
13
33
1.88
9101--9165
33
2.0
33
93
6
114
32
13
20
33
1.91
17825--17851
13
2.1
13
100
0
54
29
14
14
40
1.86
20879--20933
17
3.1
17
84
5
65
45
0
7
47
1.30
23553--23723
51
3.3
51
78
4
189
32
11
26
29
1.92
23706--23781
27
2.8
28
88
6
102
21
21
34
23
1.97
25939--26616
55
12.3
55
92
3
1034
20
20
30
28
1.97
27598--27654
1
57.0
1
82
0
69
0
3
5
91
0.51
27584--27654
9
7.8
9
80
9
65
0
8
4
87
0.66
27582--27653
11
5.9
12
77
11
67
0
8
4
87
0.66
27598--27654
28
2.2
25
90
9
87
0
3
5
91
0.51

Tables:   1

The End!