Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1366
Parameters: 2 7 7 80 10 50 1000
Length:  91798

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--48786
949
51.3
944
93
4
80439
29
19
15
35
1.93
2--48786
474
102.5
473
93
4
80553
29
19
15
35
1.93
9862--9898
1
37.0
1
100
0
74
100
0
0
0
0.00
48781--49069
144
2.0
144
99
0
569
39
15
29
16
1.89
50550--50625
12
6.9
11
75
15
52
39
2
48
9
1.49
50549--50634
24
3.8
24
72
17
85
41
2
45
10
1.51
50540--50658
42
2.8
42
92
0
193
42
2
46
8
1.47
56645--56670
13
2.0
13
100
0
52
30
15
15
38
1.88
57377--57420
21
2.1
21
83
8
54
25
31
4
38
1.76
58410--58434
13
1.9
13
100
0
50
32
16
16
36
1.90
62153--62178
13
2.0
13
100
0
52
30
15
15
38
1.88
62561--67090
475
9.5
475
97
0
8158
29
19
14
36
1.92
68712--68787
12
6.9
11
75
15
52
39
2
48
9
1.49
68711--68796
24
3.8
24
72
17
85
41
2
45
10
1.51
68702--68820
42
2.8
42
92
0
193
42
2
46
8
1.47
73797--78550
949
5.0
949
97
0
8944
29
19
14
36
1.92
73797--78550
475
10.0
475
98
0
8887
29
19
14
36
1.92
79178--86603
949
7.8
951
97
0
13859
29
19
14
35
1.92
79178--86603
475
15.7
475
98
0
13847
29
19
14
35
1.92
91595--91665
18
3.6
18
69
20
52
9
43
2
43
1.52
91613--91688
12
6.9
11
75
15
52
9
48
2
39
1.49
91604--91689
24
3.8
24
72
17
85
10
45
2
41
1.51
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
91579--91698
42
2.8
42
92
1
195
9
45
2
42
1.49

Tables:   1

The End!