Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1367
Parameters: 2 7 7 80 10 50 1000
Length:  24157

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3624--3726
21
5.0
21
76
19
101
82
15
0
0
0.78
3628--3732
15
7.4
14
78
15
108
82
15
0
0
0.77
3626--3726
22
4.8
22
72
16
90
83
14
0
0
0.76
3627--3732
50
2.1
51
87
5
153
83
15
0
0
0.76
3626--3690
1
65.0
1
75
0
58
87
12
0
0
0.54
3624--3726
6
16.7
6
81
15
81
82
15
0
0
0.78
5168--6013
30
28.9
30
84
6
1024
29
32
16
22
1.95
5168--6013
59
14.4
59
86
5
1024
29
32
16
22
1.95
6121--6394
43
6.1
43
81
9
323
25
24
18
31
1.97
6072--6447
92
4.0
92
92
1
608
25
23
17
32
1.97
6348--6469
52
2.3
55
84
4
169
26
24
13
36
1.92
7077--7145
32
2.1
33
91
2
113
36
11
15
36
1.84
7182--7206
13
1.9
13
100
0
50
32
16
16
36
1.90
7215--7395
52
3.5
52
96
0
326
34
17
18
28
1.94
15845--15899
20
2.8
20
100
0
110
40
10
14
34
1.81
15936--15984
13
3.8
13
86
0
62
40
14
10
34
1.79
18525--18587
33
1.9
33
83
6
83
28
19
17
34
1.94
18640--18664
13
1.9
13
100
0
50
36
16
16
32
1.90
18646--18685
20
2.0
20
90
0
62
40
12
17
30
1.86
23079--23124
24
1.9
24
95
0
83
39
15
8
36
1.78
23855--23944
32
2.8
32
89
1
135
34
4
8
52
1.53

Tables:   1

The End!