Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1370
Parameters: 2 7 7 80 10 50 1000
Length:  39074

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6325--6357
2
17.0
2
93
6
59
48
0
0
51
1.00
8666--8702
2
18.5
2
100
0
74
48
0
0
51
1.00
14710--14734
2
12.5
2
100
0
50
52
0
48
0
1.00
25111--25455
173
2.0
175
82
6
425
47
12
12
27
1.77
25073--25465
58
6.8
57
73
10
246
47
11
12
27
1.77
27491--28552
354
3.0
352
91
0
1701
37
18
16
27
1.92
28970--29008
20
2.0
20
89
0
60
28
17
2
51
1.59
30739--30861
15
8.4
15
69
16
53
30
13
4
51
1.60
30753--30891
29
4.9
29
81
9
153
31
12
5
50
1.62
30753--30889
58
2.4
58
87
2
188
32
13
5
49
1.63
30739--30936
44
4.6
43
74
11
154
30
11
5
52
1.60
30781--30975
100
1.9
101
88
3
295
29
10
7
52
1.62
30780--30976
15
13.6
15
73
10
151
29
10
7
52
1.61
30796--30976
71
2.5
73
87
4
253
30
9
7
52
1.61
30780--30976
29
6.8
29
81
6
161
29
10
7
52
1.61
35921--36043
51
2.4
51
83
1
149
43
13
15
27
1.83

Tables:   1

The End!