Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1375
Parameters: 2 7 7 80 10 50 1000
Length:  25040

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6100--6124
13
1.9
13
100
0
50
36
16
16
32
1.90
6080--6146
33
2.0
33
88
0
98
32
11
14
40
1.83
6187--6211
13
1.9
13
100
0
50
32
16
16
36
1.90
6220--6348
52
2.5
52
92
0
204
34
16
17
31
1.92
20126--20233
1
108.0
1
75
0
81
86
9
2
1
0.75
20126--20226
21
5.2
19
82
8
107
86
8
2
1
0.76
20126--20233
18
5.8
18
81
10
94
86
9
2
1
0.75
20126--20233
37
3.1
35
82
7
114
86
9
2
1
0.75
20124--20233
33
3.5
31
80
9
107
84
10
2
1
0.80
20126--20233
17
6.2
17
80
13
98
86
9
2
1
0.75
21587--21970
29
13.6
27
76
15
286
32
27
17
22
1.96
21591--21970
86
4.5
86
85
7
492
32
27
17
22
1.96
21591--21953
57
6.4
56
79
10
366
31
27
18
23
1.97
21596--22005
57
7.2
57
79
10
306
30
29
17
22
1.97
21641--22005
116
3.2
113
77
11
343
31
29
17
21
1.96
22023--22112
43
2.1
43
87
8
130
27
23
20
28
1.99
22237--22347
51
2.1
53
83
8
115
23
25
15
36
1.94
22067--22617
169
3.3
170
89
6
829
23
25
14
36
1.93
23519--23633
49
2.3
50
85
8
155
34
17
16
31
1.92

Tables:   1

The End!