Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1377
Parameters: 2 7 7 80 10 50 1000
Length:  32021

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6657--6693
2
18.5
2
88
0
56
48
0
2
48
1.15
16762--16794
3
11.0
3
100
0
66
33
0
0
66
0.92
17157--17198
11
3.9
11
84
6
59
69
0
0
30
0.89
17308--17338
11
2.7
12
90
10
55
0
16
0
83
0.64
18345--18375
16
1.9
16
93
0
53
12
9
0
77
0.99
19507--19562
27
2.0
28
86
10
80
41
0
0
58
0.98
20199--20244
16
2.7
17
84
15
60
41
2
2
54
1.25
20218--20266
25
2.0
24
88
4
71
40
0
0
59
0.98
21039--21071
7
4.7
7
96
0
57
48
0
0
51
1.00
21902--22082
47
3.8
48
71
17
130
41
0
3
53
1.23
21976--22118
8
18.9
8
65
18
58
38
0
4
57
1.18
21978--22048
24
3.1
23
78
11
76
39
0
1
59
1.06
22008--22067
29
2.0
30
90
3
95
41
0
0
58
0.98
21996--22060
14
4.4
14
77
14
60
41
0
0
58
0.98
22010--22080
29
2.4
29
85
4
88
42
0
1
56
1.08
22093--22131
14
2.8
13
92
7
60
41
0
7
51
1.31
22147--22204
28
2.1
28
80
6
64
50
1
3
44
1.29
24637--24695
30
1.9
30
83
10
75
37
1
0
61
1.07
24652--24713
30
2.1
30
87
3
90
30
4
0
64
1.14
25428--25453
2
13.0
2
100
0
52
50
0
0
50
1.00
26456--26491
3
12.0
3
100
0
72
66
0
0
33
0.92
31339--31363
4
6.2
4
100
0
50
76
0
0
24
0.80

Tables:   1

The End!