Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1388
Parameters: 2 7 7 80 10 50 1000
Length:  51295

Tables:   1   

This is table  1  of  1  ( 47 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
48--106
11
4.8
12
70
25
52
66
0
1
32
1.02
71--127
15
3.5
16
76
19
55
61
0
1
36
1.07
45--133
21
4.5
19
67
20
58
62
0
2
34
1.07
799--831
13
2.6
13
90
4
50
75
0
0
24
0.80
972--1007
2
18.0
2
94
0
63
47
0
2
50
1.15
2180--2235
17
3.0
19
75
17
55
53
0
3
42
1.18
2678--2723
17
2.6
19
76
16
53
54
4
0
41
1.20
3584--3624
20
2.1
20
86
4
57
31
9
2
56
1.45
3591--3634
20
2.2
20
83
4
52
31
9
2
56
1.43
4736--4810
26
2.9
27
82
7
93
54
0
0
45
0.99
5963--6015
21
2.5
20
79
8
52
45
1
0
52
1.11
5988--6035
12
4.1
11
77
15
51
35
0
0
64
0.94
6032--6086
27
2.0
27
86
6
76
49
3
0
47
1.19
6559--6602
16
2.7
17
82
6
56
36
0
2
61
1.09
6562--6622
20
3.0
20
72
11
61
34
0
1
63
1.04
6578--6690
25
4.3
25
70
19
79
36
0
0
62
1.01
6660--6697
17
2.2
17
86
9
51
42
0
0
57
0.98
7088--7167
28
2.8
29
73
19
78
45
1
12
41
1.50
7316--7372
30
1.9
30
88
0
87
45
14
7
33
1.71
8148--8220
27
2.7
27
75
10
78
53
2
0
43
1.15
8345--8390
16
2.9
16
87
6
67
17
0
2
80
0.81
8566--8604
16
2.4
16
86
4
51
58
2
0
38
1.12
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8585--8640
16
3.0
19
80
19
57
62
1
0
35
1.06
8866--8960
20
4.8
20
69
19
65
46
0
1
52
1.07
8850--8927
37
2.2
35
82
13
88
46
0
0
53
1.00
8877--8961
27
2.9
28
72
13
73
45
0
1
52
1.08
9338--9379
22
1.9
22
85
9
59
33
0
0
66
0.92
9532--9617
22
3.9
22
70
11
68
44
0
0
55
0.99
9536--9613
29
2.6
30
80
10
88
43
0
0
56
0.99
10527--10575
2
24.5
2
100
0
98
0
48
0
51
1.00
10997--11039
4
10.8
4
94
0
68
20
0
27
51
1.48
15023--15067
19
2.4
19
85
3
56
62
0
0
37
0.96
36735--36766
14
2.2
15
94
5
57
46
0
0
53
1.00
36839--36868
15
2.0
15
93
0
51
63
0
0
36
0.95
37140--37232
34
2.8
32
78
10
91
52
0
4
43
1.21
37200--37242
22
2.0
21
86
8
61
46
0
2
51
1.13
37242--37284
19
2.3
19
88
8
61
53
0
0
46
1.00
37245--37292
21
2.4
19
82
6
60
47
0
0
52
1.00
37446--37505
18
3.2
19
72
15
54
48
0
5
46
1.24
42336--42365
9
3.2
9
95
4
51
53
0
3
43
1.17
42678--42722
22
2.1
21
83
4
54
35
4
0
60
1.17
49898--49935
19
2.0
20
89
5
60
36
0
0
63
0.95
49928--49965
18
2.1
19
85
5
51
55
0
0
44
0.99
50073--50105
17
1.9
18
88
11
52
33
0
0
66
0.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50954--51016
23
2.7
24
71
14
60
44
0
1
53
1.10
50956--51016
24
2.6
23
72
12
61
44
0
1
54
1.10
50984--51043
16
3.5
16
75
16
66
43
0
0
56
0.99

Tables:   1

The End!