Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1400
Parameters: 2 7 7 80 10 50 1000
Length:  45015

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2175--2690
260
2.0
258
99
0
1014
34
20
14
30
1.93
5146--5181
15
2.4
15
100
0
72
58
5
11
25
1.54
12394--12429
2
18.0
2
100
0
72
50
0
50
0
1.00
21232--21301
27
2.5
28
84
13
92
24
7
24
44
1.78
23284--23319
13
2.6
15
79
20
51
58
0
0
41
0.98
25195--25255
29
2.1
29
90
3
97
55
1
3
39
1.26
25481--25514
2
17.5
2
87
6
52
44
0
0
55
0.99
25507--25596
45
2.0
45
97
0
171
28
12
8
50
1.70
29499--29579
42
1.9
42
94
0
144
25
18
27
28
1.98
29499--29566
21
3.2
21
65
8
57
25
17
26
30
1.97
29559--29594
18
2.0
18
94
0
63
22
19
33
25
1.97
31307--31428
62
2.0
62
91
0
199
46
14
17
21
1.83
31324--31415
31
3.0
30
70
9
78
44
15
18
21
1.86
31334--31427
31
3.0
31
70
11
93
45
14
18
21
1.85
31437--31497
25
2.4
25
91
2
95
40
13
8
37
1.74
43942--44059
58
2.0
59
90
3
184
38
22
13
26
1.91

Tables:   1

The End!