Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1404
Parameters: 2 7 7 80 10 50 1000
Length:  20573

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3532--3563
2
16.0
2
100
0
64
50
0
0
50
1.00
3638--3683
23
2.1
23
84
11
62
58
4
2
34
1.30
8980--9036
20
2.8
20
75
0
60
57
1
5
35
1.31
11469--11507
2
19.5
2
100
0
78
48
0
0
51
1.00
13354--13486
63
2.1
62
79
10
146
50
0
1
48
1.10
15481--15524
17
2.5
18
82
14
56
31
2
0
65
1.05
15495--15528
17
2.0
17
94
0
59
26
0
0
73
0.83
15943--15997
18
3.2
18
79
5
60
52
7
3
36
1.47
16358--16386
3
9.7
3
100
0
58
31
0
0
68
0.89
16433--16494
28
2.1
30
82
14
76
41
1
9
46
1.46
17590--17636
15
3.1
15
78
3
58
29
0
0
70
0.88
17777--17809
12
2.8
12
90
4
50
51
0
0
48
1.00
18561--18586
3
8.7
3
100
0
52
30
0
0
69
0.89
18921--18978
20
2.9
20
72
10
55
70
0
0
29
0.87
18922--18996
30
2.5
29
83
10
89
65
0
1
33
1.01
19051--19115
21
3.2
20
75
14
71
40
3
10
46
1.54
19051--19115
20
3.2
20
76
18
64
40
3
10
46
1.54
20019--20061
21
2.0
22
81
4
52
67
0
0
32
0.91
20476--20522
19
2.5
18
83
10
58
38
0
0
61
0.96
20480--20535
27
2.0
29
86
6
80
32
0
0
67
0.91

Tables:   1

The End!