Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1413
Parameters: 2 7 7 80 10 50 1000
Length:  31129

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4752--4803
17
2.8
18
75
13
61
53
0
0
46
1.00
12166--12225
19
3.0
20
73
11
61
45
1
0
53
1.10
13082--13123
23
1.9
23
85
9
61
50
7
4
38
1.51
14335--14427
47
2.0
47
97
0
177
44
13
9
32
1.77
14854--14892
19
2.0
19
85
14
53
51
0
0
48
1.00
15345--15376
11
2.6
13
85
14
50
59
0
0
40
0.97
17212--17244
2
16.5
2
93
0
57
54
0
0
45
0.99
18609--18668
24
2.4
25
78
15
63
46
1
5
46
1.34
21936--21991
29
1.9
29
85
7
78
57
0
1
41
1.09
21975--22008
14
2.5
14
95
4
61
55
0
0
44
0.99
22619--22687
20
3.5
18
78
13
66
55
1
1
42
1.18
26161--26247
45
1.9
45
90
0
138
36
20
26
16
1.93

Tables:   1

The End!