Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1415
Parameters: 2 7 7 80 10 50 1000
Length:  22158

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
646--670
2
12.5
2
100
0
50
48
0
0
52
1.00
5393--5417
7
3.6
7
100
0
50
12
0
0
88
0.53
8486--8510
3
8.3
3
100
0
50
32
0
0
68
0.90
11641--11668
2
14.0
2
100
0
56
50
0
0
50
1.00
12672--12707
2
18.0
2
100
0
72
50
0
0
50
1.00
13212--13251
2
20.0
2
100
0
80
50
0
0
50
1.00
15260--15287
6
4.7
6
100
0
56
64
0
0
35
0.94
15742--15775
2
17.0
2
93
0
59
47
0
2
50
1.16
18800--18827
2
14.0
2
100
0
56
50
0
0
50
1.00
20114--20172
27
2.1
28
93
3
102
52
18
6
22
1.68
20114--20181
27
2.5
26
88
6
84
51
19
7
22
1.71
21132--21165
16
2.2
15
89
5
50
26
0
0
73
0.83
22082--22121
2
20.0
2
89
0
53
47
0
47
5
1.24

Tables:   1

The End!