Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1417
Parameters: 2 7 7 80 10 50 1000
Length:  13851

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2635--2702
19
3.9
18
76
23
83
36
16
11
35
1.85
2657--2681
13
1.9
13
100
0
50
32
16
16
36
1.90
2638--2700
32
2.0
32
96
0
117
34
17
12
34
1.88
5477--5547
27
2.6
28
88
6
110
47
0
0
52
1.00
5585--5618
10
3.1
11
87
12
52
70
0
0
29
0.87
7072--7110
21
1.9
20
89
5
60
25
2
7
64
1.33
7193--7242
22
2.3
22
86
3
66
38
4
0
58
1.17
7688--7728
9
4.3
9
90
6
55
0
43
2
53
1.13
8281--8309
2
14.5
2
100
0
58
48
0
0
51
1.00
10996--11028
3
10.7
3
93
6
57
30
0
0
69
0.88
13169--13210
20
2.1
20
86
0
57
35
7
2
54
1.41

Tables:   1

The End!