Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1420
Parameters: 2 7 7 80 10 50 1000
Length:  30907

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
62--87
13
2.0
13
100
0
52
38
15
15
30
1.88
649--695
14
3.1
15
87
9
60
42
21
6
29
1.77
6713--6743
13
2.4
13
94
0
53
35
12
16
35
1.87
6693--6759
33
2.0
33
86
11
93
32
19
11
35
1.88
6788--6841
19
2.8
20
91
2
83
37
18
14
29
1.91
6808--6859
19
2.7
19
87
3
59
40
19
15
25
1.90
10362--10752
197
2.0
194
87
1
566
43
10
10
35
1.74
15862--15940
21
3.8
21
83
5
106
37
16
12
32
1.86
15977--16043
19
3.8
19
77
22
92
37
11
14
35
1.84
15978--16040
32
2.0
32
100
0
126
36
12
15
34
1.86
15997--16021
13
1.9
13
100
0
50
36
16
16
32
1.90
16083--16108
13
2.0
13
100
0
52
30
15
15
38
1.88
16063--16129
34
2.0
33
91
2
107
25
16
13
44
1.84
18476--18573
51
1.9
51
88
12
148
32
20
10
36
1.86
18716--18883
52
3.3
51
80
4
194
29
26
10
32
1.90
24526--24590
28
2.3
28
94
0
112
36
18
7
36
1.80
25397--25441
3
15.0
3
100
0
90
66
0
0
33
0.92
25614--25718
45
2.2
45
83
12
124
51
1
0
46
1.12
25623--25723
27
3.8
26
71
20
75
52
1
0
45
1.12
26016--26065
23
2.2
22
89
10
75
54
2
0
44
1.11
26165--26267
52
1.9
55
88
11
160
39
20
3
35
1.71
26930--26968
18
2.1
19
85
4
53
61
0
0
38
0.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
27265--27304
13
2.9
14
81
7
55
52
10
0
37
1.35
27263--27307
14
3.3
14
81
6
65
53
8
0
37
1.32
27439--27492
20
2.8
20
78
16
60
61
0
1
37
1.07
27664--27722
21
2.6
24
78
13
70
32
1
1
64
1.13
27666--27736
21
3.5
21
72
14
69
35
1
1
61
1.13

Tables:   1

The End!