Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1425
Parameters: 2 7 7 80 10 50 1000
Length:  28028

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3317--3341
12
2.1
12
100
0
50
56
0
0
44
0.99
4109--4147
18
2.2
18
90
4
62
51
23
15
10
1.73
5957--5999
21
2.0
21
100
0
86
48
23
18
9
1.76
6485--6546
22
2.9
22
85
9
83
29
1
0
69
0.98
6509--6554
15
2.9
16
78
12
51
26
0
0
73
0.83
6486--6554
22
3.2
22
78
19
74
28
1
0
69
0.97
7633--7661
14
2.1
14
93
6
51
41
24
3
31
1.71
14359--14387
14
2.0
15
93
6
51
48
0
6
44
1.29
15337--15369
16
2.1
16
94
0
57
0
9
6
84
0.76
17998--18049
24
2.2
24
86
10
72
67
3
0
28
1.08
18457--18516
25
2.5
24
86
5
68
56
0
0
43
0.99
18476--18519
14
3.4
14
81
18
67
52
0
0
47
1.00
21327--21368
13
3.3
13
81
15
52
47
2
0
50
1.14
23562--23604
21
2.0
21
100
0
86
53
0
18
27
1.45
23729--23763
17
2.1
17
100
0
70
60
17
5
17
1.55
24305--24356
23
2.3
22
83
12
61
46
0
1
51
1.12
24313--24379
23
2.7
23
86
11
80
40
1
2
55
1.24

Tables:   1

The End!