Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1436
Parameters: 2 7 7 80 10 50 1000
Length:  29072

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1210--1254
15
3.1
15
84
15
60
15
6
0
77
0.96
2242--2342
41
2.5
41
82
3
116
31
12
27
27
1.93
7486--7527
2
21.0
2
95
0
75
47
0
2
50
1.14
10104--10139
2
18.0
2
100
0
72
50
50
0
0
1.00
18831--19016
87
2.1
87
89
3
277
31
10
6
50
1.64
19106--19213
29
3.5
29
79
12
85
54
2
1
40
1.25
20100--20131
16
2.0
16
100
0
64
31
12
25
31
1.92
25253--25296
6
7.0
6
87
10
52
36
0
13
50
1.42
26197--26226
1
30.0
1
100
0
60
100
0
0
0
0.00
26845--26934
1
90.0
1
100
0
180
0
0
100
0
0.00
28052--28095
19
2.3
19
88
0
61
29
0
0
70
0.88
28034--28141
30
3.6
29
72
22
82
35
0
0
62
1.08
28971--29016
15
3.1
16
90
6
53
50
0
0
50
1.00

Tables:   1

The End!