Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1440
Parameters: 2 7 7 80 10 50 1000
Length:  15619

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
446--508
24
2.6
24
82
2
72
36
4
1
57
1.30
891--962
30
2.5
30
86
4
94
45
0
1
52
1.09
981--1064
29
3.0
28
84
11
102
33
0
1
65
1.00
982--1069
28
3.1
29
84
11
103
35
0
1
63
1.02
1012--1068
16
3.7
17
71
21
54
38
0
0
61
0.96
1018--1080
28
2.2
29
82
2
74
44
0
0
55
0.99
1043--1099
23
2.5
24
75
16
66
47
0
1
50
1.11
1251--1295
12
4.0
12
75
16
51
71
0
0
28
0.87
2832--2863
2
16.0
2
93
0
55
46
0
3
50
1.17
3505--3530
7
3.7
7
100
0
52
11
0
0
88
0.52
6657--6684
2
14.0
2
100
0
56
50
0
0
50
1.00
6668--6740
36
2.0
36
100
0
146
35
16
2
45
1.62
8256--8360
45
2.4
43
80
13
117
56
0
0
42
1.06
9460--9555
19
4.8
19
69
13
59
10
11
0
78
0.98
9481--9517
16
2.3
16
90
0
56
16
2
0
81
0.81
11600--11636
2
18.5
2
100
0
74
0
51
0
48
1.00
12612--12652
7
6.0
7
83
13
50
85
4
0
9
0.73
12627--12652
13
2.0
13
100
0
52
84
0
0
15
0.62
14326--14376
22
2.4
22
83
6
61
33
0
1
64
1.05
14339--14383
22
2.1
22
84
8
58
37
0
2
60
1.09

Tables:   1

The End!