Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1447
Parameters: 2 7 7 80 10 50 1000
Length:  24165

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
136--202
37
1.9
35
85
11
93
31
23
10
34
1.89
663--687
13
1.9
13
100
0
50
36
16
16
32
1.90
640--707
33
2.1
33
89
8
104
32
14
16
36
1.89
1900--1924
12
2.1
12
100
0
50
52
8
0
40
1.31
5687--5716
14
2.2
13
94
5
51
10
23
20
46
1.80
6470--6517
14
3.4
14
83
8
62
41
0
4
54
1.20
18068--18099
16
2.0
16
100
0
64
31
6
25
37
1.81
18093--18144
19
2.5
22
76
23
67
34
3
40
21
1.71
18204--18263
28
2.1
28
100
0
120
28
10
21
40
1.85
18722--18748
13
2.1
13
100
0
54
29
14
14
40
1.86
18734--18789
19
2.8
21
86
8
80
33
14
17
33
1.90
18819--18856
20
1.9
20
94
0
67
31
10
18
39
1.85
18839--18864
13
2.0
13
100
0
52
30
15
15
38
1.88
18818--18884
33
2.0
32
88
11
100
35
11
17
34
1.87
22038--22095
30
2.0
29
89
3
89
18
15
12
53
1.72
22519--22584
23
2.9
23
83
0
87
6
10
22
60
1.51
22519--22607
23
3.7
24
79
10
76
7
12
21
58
1.59
23056--23099
12
3.5
12
82
11
61
11
27
11
50
1.72

Tables:   1

The End!