Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1450
Parameters: 2 7 7 80 10 50 1000
Length:  71457

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1028--1581
28
20.4
28
74
7
444
30
27
16
25
1.96
1027--1771
56
13.8
56
75
11
526
30
28
16
25
1.96
1183--1333
76
2.0
76
86
2
214
28
29
17
24
1.98
1027--1524
132
3.7
131
79
7
468
30
28
16
25
1.96
1536--1624
44
2.0
44
86
0
124
30
24
15
29
1.96
1590--1785
28
6.8
28
73
10
139
29
28
17
25
1.97
1738--1820
31
2.7
31
76
0
103
26
31
25
16
1.97
4832--4872
21
2.0
21
85
9
57
41
12
7
39
1.70
5007--5037
10
3.1
10
90
0
53
22
29
6
41
1.78
5203--5269
37
1.9
35
88
11
102
32
11
25
29
1.92
5787--5894
51
2.1
51
93
3
182
24
15
17
42
1.88
19816--19927
7
16.0
7
73
14
65
81
15
0
2
0.86
19818--19929
45
2.6
42
84
8
120
82
14
0
2
0.83
19827--19927
40
2.6
37
80
14
116
81
14
0
2
0.87
19818--19928
52
2.1
52
82
14
140
81
14
0
2
0.84
21502--22030
32
16.7
31
83
6
582
32
32
17
17
1.93
21512--22030
95
5.5
95
85
3
670
32
32
17
17
1.93
21502--22030
127
4.2
127
85
4
664
32
32
17
17
1.93
22064--22190
52
2.7
43
73
19
128
25
29
17
28
1.97
22202--22369
61
2.8
61
91
0
264
23
25
13
38
1.90
22967--23064
31
3.2
31
88
0
133
27
19
15
37
1.92
31010--31034
13
1.9
13
100
0
50
36
16
16
32
1.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32655--32685
3
10.3
3
100
0
62
32
0
35
32
1.58
36944--36999
20
2.8
20
88
0
85
33
12
14
39
1.83
37016--37071
20
2.8
20
83
5
69
30
16
16
37
1.90
36862--37120
71
3.6
70
85
3
331
30
15
14
39
1.87
49747--49802
20
2.8
20
88
0
85
33
12
14
39
1.83
49666--49923
71
3.6
70
85
3
338
30
15
14
39
1.87
49819--49874
20
2.8
20
83
5
69
30
16
16
37
1.90
62539--62594
20
2.8
20
88
0
85
33
12
14
39
1.83
62458--62715
71
3.6
70
85
3
338
30
15
14
39
1.87
62611--62666
20
2.8
20
83
5
69
30
16
16
37
1.90

Tables:   1

The End!