Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: Scaffold1455
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 12848
ACGTcount: A:0.36, C:0.15, G:0.18, T:0.31
Found at i:895 original size:473 final size:475
Alignment explanation
Indices: 6--3789 Score: 6007
Period size: 475 Copynumber: 8.0 Consensus size: 475
1 ATCAC
* *
6 GAAATGAATGAAGATCCTTACCAGAATCCATATTTGTCTCATTTGA-GAATGAACTTATACTTTA
1 GAAATGAATGAAGATCCTTACTAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTA
* * *
70 CAAAAAACAGGTGGGAAGAAAGCGTATCTTGCGAAACCAAAGCGTC-ATATCATGTATCCTTATG
66 C-AAAAATAGGTGGGAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAATATCACGTATCCTTATG
* *
134 AGAAAACTATGTTTATGGTGCCTAATCCTGAAAAGAAA-GGGATTAGTATGAGTA-TCTTGTTTG
130 AGAAAACTATGTTTATGATGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGCTTG
* * *
197 TCTTATTTTATAGACAAACTTTGATTCTATCAATAACGGTAGGAAGAAAAGCTTCTCTTGCGACC
195 TCTTATTTAAGAGACAAACTTTGATTCTATCAATAACGGTAGAAAGAAAAGCTTCTCTTGCGACC
* * **
262 CCAAAGCATTAATGTCTCGTATCCTAATGAAAGGAATGTGTTTTTGGTTCCCAATCTTTTCAAGA
260 CCAAAGCATTAATGTCT-TTATCATAATGAAAGGAATGTGTTTTTGGTTCCCAATCTTTAAAAGA
* * * * *
327 TTGAGGACTTTTATGAGAATCAATGCATGTCTCATTTAAAGTACAAACTTTGTTTTTAAGGAAAA
324 ATGGGGACTTTTACGAGAATCAATGCATGACTCATTTAAAGTACAAACTTTGATTTTAAGGAAAA
* * *
392 TAAGGCAAAGAAAAGATTTCCATACAAAAGAAAACCATAAATATCATTTATCCTAATGAGAAGAA
389 TAAGGCAAAGAAAAGATTTCCATACAAAAGAAAACCATAAATATCATGTATCATAATGAGGAGAA
457 TGTGTTTATGGTGCCTAATTAT
454 TGTGTTTATGGTGCCTAATTAT
*
479 GAAATGAATGAAGATCCTTACTGGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTA
1 GAAATGAATGAAGATCCTTACTAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTA
* *
544 CAAAAATAGGTGGGAAGAAAGCGTATCTTGCGAAACCAACGCTTCAATATCACGTATCTTTATGA
66 CAAAAATAGGTGGGAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAATATCACGTATCCTTATGA
609 GAAAACTATGTTTATGATG-CTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGCTTGT
131 GAAAACTATGTTTATGATGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGCTTGT
*
673 CTTATTTAAGAGAC-AACTTTGATTCTATCAATAACGGTAGAAAGAAAAGCTTCTCTTGTGACCC
196 CTTATTTAAGAGACAAACTTTGATTCTATCAATAACGGTAGAAAGAAAAGCTTCTCTTGCGACCC
* * *
737 CAAAGCATTAATGTCTTTATCATAATGAAAGGAATGTGTTCTTGGTTCCCATTC-TGAAAAGAAT
261 CAAAGCATTAATGTCTTTATCATAATGAAAGGAATGTGTTTTTGGTTCCCAATCTTTAAAAGAAT
* *
801 GGGGCCTTTTACGAGAATCAATGCATGACTCATTTCAAGTACAAACTTTGATTTTAAGGAAAATA
326 GGGGACTTTTACGAGAATCAATGCATGACTCATTTAAAGTACAAACTTTGATTTTAAGGAAAATA
* * *
866 AGGCAAAGAAAAAGATTTCCATGCAAAAGAAAACCATCAATATCATGTATCATGATGAGGAGAAT
391 AGGCAAAG-AAAAGATTTCCATACAAAAGAAAACCATAAATATCATGTATCATAATGAGGAGAAT
** *
931 GTGTTTATACTGCCTAATCAT
455 GTGTTTATGGTGCCTAATTAT
* * *
952 CAAATGAAAGAAGATCCTTACTAGAATCCATGTTTGTCTCATTTGCGGAATGAACTTATA-TTCT
1 GAAATGAATGAAGATCCTTACTAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTT-T
* *
1016 ACAAAAATAGGTGGGAAGAAAGCGTATCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATG
65 ACAAAAATAGGTGGGAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAATATCACGTATCCTTATG
* *
1081 AGAAAACTATGTTTATGGTGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTG
130 AGAAAACTATGTTTATGATGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGCTTG
* * * *
1146 TCTTATTTTATAGACAAACTTTCATTCTATCAATAACGGTAGAAAGAAAGGCTTCTCTTGCGACC
195 TCTTATTTAAGAGACAAACTTTGATTCTATCAATAACGGTAGAAAGAAAAGCTTCTCTTGCGACC
* **
1211 CCAAAGCATTAATGTCTTGTATCCTAATGAAAGGAATGTGTTTTTGGTTCCCAATCTTTTCAAGA
260 CCAAAGCATTAATGTCTT-TATCATAATGAAAGGAATGTGTTTTTGGTTCCCAATCTTTAAAAGA
* * * * *
1276 TTAGGGACTTTTATGAGAATCAATGCATGTCCCATTTAAAGTACAAACTTTGATTTTAAGGAAAA
324 ATGGGGACTTTTACGAGAATCAATGCATGACTCATTTAAAGTACAAACTTTGATTTTAAGGAAAA
* * *
1341 TAAGGCAAAGAAAAGATTTCCATAC-AAAGAAAACCATAAATATCATTTATCCTAATGAGAAGAA
389 TAAGGCAAAGAAAAGATTTCCATACAAAAGAAAACCATAAATATCATGTATCATAATGAGGAGAA
1405 TGTGTTTATGGTGCCTAATTAT
454 TGTGTTTATGGTGCCTAATTAT
1427 GAAATGAATGAAGATCCTTACTAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTA
1 GAAATGAATGAAGATCCTTACTAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTA
*
1492 C-AAAATAGGTGGGAAGAAAGCGTATCTTGCG-AACCAAAGCTTCAATATCACGTATCTTTATGA
66 CAAAAATAGGTGGGAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAATATCACGTATCCTTATGA
1555 GAAAACTATGTTTATGATGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGCTTGT
131 GAAAACTATGTTTATGATGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGCTTGT
*
1620 CTTATTTAAGAGACAAACTTTGATTCTATCAATAACGGTAGAAAGAAAAGCTTCTCTTGTGACCC
196 CTTATTTAAGAGACAAACTTTGATTCTATCAATAACGGTAGAAAGAAAAGCTTCTCTTGCGACCC
* * *
1685 CAAAGCATTAATGTCTTTATCATAATGAAAGGAATGTGTTCTTGGTT-CCATTCTTAAAAAGAAT
261 CAAAGCATTAATGTCTTTATCATAATGAAAGGAATGTGTTTTTGGTTCCCAATCTTTAAAAGAAT
* *
1749 GGGGCCTTTTACGAGAATCAATGCATGACTCATTTCAAGTACAAACTTTGATTTTAAGG-AAATA
326 GGGGACTTTTACGAGAATCAATGCATGACTCATTTAAAGTACAAACTTTGATTTTAAGGAAAATA
* * *
1813 AGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAATATCATGTATCATGATGAGGAGAATG
391 AGGCAAAGAAAAGATTTCCATACAAAAGAAAACCATAAATATCATGTATCATAATGAGGAGAATG
* ** *
1878 TGTTTTTACTGCCTAATCAT
456 TGTTTATGGTGCCTAATTAT
* * * *
1898 CAAATGAAAGAAGATCCTTACTAGAATCCGTG-TTGTCTCATTTGCGGAATGAACTTATACTTTA
1 GAAATGAATGAAGATCCTTACTAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTA
* * *
1962 CAAAAAATA-GTGGGAAGAAAGCGTATCTTGCGAAATCAAAGCATCAATATCATGTATCCTTATG
66 C-AAAAATAGGTGGGAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAATATCACGTATCCTTATG
* *
2026 AGAAAACTATGTTTATGGTGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTG
130 AGAAAACTATGTTTATGATGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGCTTG
* * * * *
2091 TCCTATTTTATAGACAAAACTTTGATTCTATCAGTAACGGTAGGAAGAAAAGCTTCTCTTGCGAC
195 TCTTATTTAAGAGAC-AAACTTTGATTCTATCAATAACGGTAGAAAGAAAAGCTTCTCTTGCGAC
* **
2156 CCCAAAGCATTAATGTCTTGTATCCTAATGAAAAGGAATGTGTTTTTGGTTCCCAATCTTTTCAA
259 CCCAAAGCATTAATGTCTT-TATCATAATG-AAAGGAATGTGTTTTTGGTTCCCAATCTTTAAAA
* * * *
2221 GATTAGGGACTTTTATGAGAATCAATGCATGTCTCATTTAAAGTACAAACTTTGATTTTAAGGAA
322 GAATGGGGACTTTTACGAGAATCAATGCATGACTCATTTAAAGTACAAACTTTGATTTTAAGGAA
* * *
2286 AACAAGGCAAAGAAAAGATTTCCATACAAAAGAAAACCATAAATATCATTTATCCTAATGAGGAG
387 AATAAGGCAAAGAAAAGATTTCCATACAAAAGAAAACCATAAATATCATGTATCATAATGAGGAG
2351 AATGTTGTTTATGGTGCCTAATTAT
452 AATG-TGTTTATGGTGCCTAATTAT
* *
2376 GAAATGAATGAAGATCCTTACTAGAATCTATGTTTTGTCTCATTTTAGGAATGAACTTATACTTT
1 GAAATGAATGAAGATCCTTACTAGAATCCATG-TTTGTCTCATTTGAGGAATGAACTTATACTTT
*
2441 ACAAAAATAGGTGGGAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAATATCACGTATCTTTATG
65 ACAAAAATAGGTGGGAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAATATCACGTATCCTTATG
2506 AGAAAACTATGTTTATGATGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGCTTG
130 AGAAAACTATGTTTATGATGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGCTTG
* *
2571 TCTTATTTAAGAGACAAACTTTGATTCTATCAATAACGGTAGAAAGAAAGGCTTCTCTTGTGACC
195 TCTTATTTAAGAGACAAACTTTGATTCTATCAATAACGGTAGAAAGAAAAGCTTCTCTTGCGACC
* * * *
2636 CCAAAGCATTAATGACTTTATCATAAAGAAAGGAATGTGTTTTTGGTTCCCATTCTTGAAAAGAA
260 CCAAAGCATTAATGTCTTTATCATAATGAAAGGAATGTGTTTTTGGTTCCCAATCTTTAAAAGAA
* * *
2701 TGGGG-CTTTTTACGAGAATCAAGGCACGACTCATTTAAAGTATAAACTTTGATTTTAAGGAAAA
325 TGGGGAC-TTTTACGAGAATCAATGCATGACTCATTTAAAGTACAAACTTTGATTTTAAGGAAAA
* * *
2765 TAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAATATCATGTATCATGATGAGGAGAA
389 TAAGGCAAAGAAAAGATTTCCATACAAAAGAAAACCATAAATATCATGTATCATAATGAGGAGAA
** *
2830 TGTGTTTATACTGCCTAATCAT
454 TGTGTTTATGGTGCCTAATTAT
* * * *
2852 CAAATGAAAGAATATCCTTACTAGAATCCATGTTTGTCTCATTTGCGGAATGAACTTATACTTTA
1 GAAATGAATGAAGATCCTTACTAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTA
* *
2917 CAAAAATAGGTGGGAAGAAAGCGTATCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGA
66 CAAAAATAGGTGGGAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAATATCACGTATCCTTATGA
* *
2982 GAAAACTATGTTTATGGTGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGT
131 GAAAACTATGTTTATGATGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGCTTGT
* * *
3047 CTTATTTTATAGACAAACTTTGATTCTATCAATAACGGTAGGAAGAAAAGCTTCTCTTGCGACCC
196 CTTATTTAAGAGACAAACTTTGATTCTATCAATAACGGTAGAAAGAAAAGCTTCTCTTGCGACCC
* ** *
3112 CAAAGCATTAATGTCTTGTATCCTAATGAAAGGAATGTGTTTTTGGTTCCCAATCTTTTCAAGAT
261 CAAAGCATTAATGTCTT-TATCATAATGAAAGGAATGTGTTTTTGGTTCCCAATCTTTAAAAGAA
* * *
3177 TGAGGACTTTTATGAGAATCAATGCATGTCTCATTTAAAGTACAAACTTTGATTTTAAGGAAAAT
325 TGGGGACTTTTACGAGAATCAATGCATGACTCATTTAAAGTACAAACTTTGATTTTAAGGAAAAT
* * *
3242 AAGGCAAAGAAAAGATTTCCATACAAAAGAAAACCATAAATATCATTTATCCTAATGAGAAGAAT
390 AAGGCAAAGAAAAGATTTCCATACAAAAGAAAACCATAAATATCATGTATCATAATGAGGAGAAT
3307 GTGTTTATGGTGCCTAATTAT
455 GTGTTTATGGTGCCTAATTAT
3328 GAAATGAATGAAGATCCTTACTAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTA
1 GAAATGAATGAAGATCCTTACTAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTA
* *
3393 CAAAAATAGGTGGGTAGAAAGCGTATCTTGCGAAACCAAAGCTTCAATATCACGTATCTTTATGA
66 CAAAAATAGGTGGGAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAATATCACGTATCCTTATGA
3458 GAAAACTATGTTTATGATGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGCTTGT
131 GAAAACTATGTTTATGATGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGCTTGT
* *
3523 CTTATTTAAGAGACAAACTTAGATTCTATCAATAACGGTAGAAAGAAAAGCTTCTCTTGTGACCC
196 CTTATTTAAGAGACAAACTTTGATTCTATCAATAACGGTAGAAAGAAAAGCTTCTCTTGCGACCC
* * *
3588 CAAAGCATTAATGTCTTTATCATAATGAAAGGAATGTGTTCTTGGTTCCCATTCTTGAAAAGAAT
261 CAAAGCATTAATGTCTTTATCATAATGAAAGGAATGTGTTTTTGGTTCCCAATCTTTAAAAGAAT
* *
3653 GGGGCCTTTTACGAGAATCAATGCATGACTCATTTCAAGTACAAACTTTGATTTTAAGGAAAATA
326 GGGGACTTTTACGAGAATCAATGCATGACTCATTTAAAGTACAAACTTTGATTTTAAGGAAAATA
* * *
3718 AGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAATATCATGTATCATGATGAGGAGAATG
391 AGGCAAAGAAAAGATTTCCATACAAAAGAAAACCATAAATATCATGTATCATAATGAGGAGAATG
3783 TGTTTAT
456 TGTTTAT
3790 ACTACCTAAT
Statistics
Matches: 3022, Mismatches: 262, Indels: 52
0.91 0.08 0.02
Matches are distributed among these distances:
470 59 0.02
471 169 0.06
472 211 0.07
473 574 0.19
474 229 0.08
475 616 0.20
476 598 0.20
477 287 0.09
478 52 0.02
479 70 0.02
480 157 0.05
ACGTcount: A:0.36, C:0.15, G:0.18, T:0.31
Consensus pattern (475 bp):
GAAATGAATGAAGATCCTTACTAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTA
CAAAAATAGGTGGGAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAATATCACGTATCCTTATGA
GAAAACTATGTTTATGATGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGCTTGT
CTTATTTAAGAGACAAACTTTGATTCTATCAATAACGGTAGAAAGAAAAGCTTCTCTTGCGACCC
CAAAGCATTAATGTCTTTATCATAATGAAAGGAATGTGTTTTTGGTTCCCAATCTTTAAAAGAAT
GGGGACTTTTACGAGAATCAATGCATGACTCATTTAAAGTACAAACTTTGATTTTAAGGAAAATA
AGGCAAAGAAAAGATTTCCATACAAAAGAAAACCATAAATATCATGTATCATAATGAGGAGAATG
TGTTTATGGTGCCTAATTAT
Found at i:3993 original size:245 final size:245
Alignment explanation
Indices: 3563--4059 Score: 904
Period size: 245 Copynumber: 2.0 Consensus size: 245
3553 AATAACGGTA
* * *
3563 GAAAGAAAAGCTTCTCTTGTGACCCCAAAGCATTAATGTCTTTATCATAATGAAAGGAATGTGTT
1 GAAAGAAAAGCTTCTCTTGTGACCCCAAAGCATTAATGACTTCATCATAAAGAAAGGAATGTGTT
* * *
3628 CTTGGTTCCCATTCTTGAAAAGAATGGGGCCTTTTACGAGAATCAATGCATGACTCATTTCAAGT
66 CTTGGTTCCCATTCTTGAAAAGAATGGGGCCTTTTACGAGAATCAAGGCACGACTCATTTAAAGT
3693 ACAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAAT
131 ACAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAAT
3758 ATCATGTATCATGATGAGGAGAATGTGTTTATACTACCTAATCATCAAAT
196 ATCATGTATCATGATGAGGAGAATGTGTTTATACTACCTAATCATCAAAT
*
3808 GAAAGAAAGGCTTCTCTTGTGACCCCAAAGCATTAATGACTTCATCATAAAGAAAGGAATGTGTT
1 GAAAGAAAAGCTTCTCTTGTGACCCCAAAGCATTAATGACTTCATCATAAAGAAAGGAATGTGTT
*
3873 TTTGGTTCCCATTCTTGAAAAGAATGGGGCCTTTTACGAGAATCAAGGCACGACTCATTTAAAGT
66 CTTGGTTCCCATTCTTGAAAAGAATGGGGCCTTTTACGAGAATCAAGGCACGACTCATTTAAAGT
*
3938 ATAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAAT
131 ACAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAAT
*
4003 ATCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATCATCAAAT
196 ATCATGTATCATGATGAGGAGAATGTGTTTATACTACCTAATCATCAAAT
4053 GAAAGAA
1 GAAAGAA
4060 GATCCTTACT
Statistics
Matches: 242, Mismatches: 10, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
245 242 1.00
ACGTcount: A:0.38, C:0.15, G:0.18, T:0.28
Consensus pattern (245 bp):
GAAAGAAAAGCTTCTCTTGTGACCCCAAAGCATTAATGACTTCATCATAAAGAAAGGAATGTGTT
CTTGGTTCCCATTCTTGAAAAGAATGGGGCCTTTTACGAGAATCAAGGCACGACTCATTTAAAGT
ACAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAAT
ATCATGTATCATGATGAGGAGAATGTGTTTATACTACCTAATCATCAAAT
Found at i:4931 original size:475 final size:476
Alignment explanation
Indices: 3810--12848 Score: 14750
Period size: 476 Copynumber: 19.0 Consensus size: 476
3800 CATCAAATGA
* * * * *
3810 AAGAAAGGCTTCTCTTGTGACCCCAAAGCATTAATGACTT-CATCATAAAGAAAGGAATGTGTTT
1 AAGAAAAGCTTCTCTTGTGACCCCAAAGCATTAATGTCTTGTATCCTAATGAAAGGAATGTGTTT
* *** * * * * * * *
3874 TTGGTTCCCATTCTTGAAAAGAATGGGGCCTTTTACGAGAATCAAGGCACGACTCATTTAAAGTA
66 TTGGTTCCCAATCTTTTCAAGATTAGGGACTTTTATGAGAATCAATGCATGTCTCATTTAAAGTA
*
3939 TAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAATA
131 CAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAATA
* *
4004 TCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATCATCAAATGAAAGAAGATCCTTAC
196 TCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATCATGAAATGAATGAAGATCCTTAC
*
4069 TAGAATCCATGTTTGTCTCATTTGCGGAATGAACTTATACTTTACAAAAATAGGTGGGAAGAAAG
261 TAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTACAAAAATAGGTGGGAAGAAAG
*
4134 CGTATCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGTGCC
326 CGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGTGCC
* *
4199 TAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGTCCTATTTTATAGACAAACTTT
391 TAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGTCTTATTTTAGAGACAAACTTT
*
4264 GATTCTATCAGTAACGGTAGG
456 GATTCTATCAATAACGGTAGG
*
4285 AAGAAAAGCTTCTCTTGCGACCCCAAAGCATTAATGTCTTGTATCCTAATGAAAGGAATGTGTTT
1 AAGAAAAGCTTCTCTTGTGACCCCAAAGCATTAATGTCTTGTATCCTAATGAAAGGAATGTGTTT
4350 TTGGTTCCCAATCTTTTCAAGATTAGGGACTTTTATGAGAATCAATGCATGTCTCATTTAAAGTA
66 TTGGTTCCCAATCTTTTCAAGATTAGGGACTTTTATGAGAATCAATGCATGTCTCATTTAAAGTA
*
4415 CAAACTTTGATTTTAAGGAAAACAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAATA
131 CAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAATA
* *
4480 TCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATCATCAAATGAAAGAAGATCCTTAC
196 TCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATCATGAAATGAATGAAGATCCTTAC
*
4545 TAGAATCCATGTTTGTCTCATTTGCGGAATGAACTTATACTTTACAAAAATAGGTGGGAAGAAAG
261 TAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTACAAAAATAGGTGGGAAGAAAG
*
4610 CGTATCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGTGCC
326 CGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGTGCC
* *
4675 TAATCCTG-AAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGTCCTATTTTATAGACAAACTTT
391 TAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGTCTTATTTTAGAGACAAACTTT
*
4739 GATTCTATCAGTAACGGTAGG
456 GATTCTATCAATAACGGTAGG
* *
4760 AAGAAAAGCTTCTCTTGCGACCCCAAAGCATTAATGTCTTGCATCCTAATGAAAGGAATGTGTTT
1 AAGAAAAGCTTCTCTTGTGACCCCAAAGCATTAATGTCTTGTATCCTAATGAAAGGAATGTGTTT
4825 TTGGTTCCCAATCTTTTCAAGATTAGGGACTTTTATGAGAATCAATGCATGTCTCATTTAAAGTA
66 TTGGTTCCCAATCTTTTCAAGATTAGGGACTTTTATGAGAATCAATGCATGTCTCATTTAAAGTA
* * *
4890 CAAACTTTGATTTTAAGGAAAACAAGGCAAAGAAAAGATTTCCATACAAAAGAAAACCATAAATA
131 CAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAATA
* * * ** *
4955 TCATTTATCCTAATGAGGAGAATGTGTTTATGGTGCCTAATTATGAAATGAATGAAGATCCTTAC
196 TCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATCATGAAATGAATGAAGATCCTTAC
*
5020 TAGAATCTATGTTTGTCTCATTTGAGGAATGAACTTATACTTTACAAAAATAGGTGGGAAGAAAG
261 TAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTACAAAAATAGGTGGGAAGAAAG
* * * *
5085 CGTATCTTGCGAAACCAAAGCTTCAATATCACGTATCTTTATGAGAAAAATATGTTTATGATGCC
326 CGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGTGCC
* * * *
5150 TAATCCTGAAAAGAAAGGGGATTAGTACGAGTATTCTTGCTTGTCTTATTTAAGAGACAAACTTA
391 TAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGTCTTATTTTAGAGACAAACTTT
* *
5215 GATTCTATCAATTACGGTAGA
456 GATTCTATCAATAACGGTAGG
* * *
5236 AAGAAAAGCTTCTCTTGTGACCCCAAATCATTAATGTCTT-TATCATAATGAAAGGAATGTGTTC
1 AAGAAAAGCTTCTCTTGTGACCCCAAAGCATTAATGTCTTGTATCCTAATGAAAGGAATGTGTTT
* *** * * * * * *
5300 TTGGTTCCCATTCTTGAAAAGAATGGGGCCTTTTACGAGAATCAATGCATGACTCATTTCAAGTA
66 TTGGTTCCCAATCTTTTCAAGATTAGGGACTTTTATGAGAATCAATGCATGTCTCATTTAAAGTA
5365 CAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAATA
131 CAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAATA
* * *
5430 TCATGTATCATGATAAGGAGAATGTGTTTATACTGCCTAATCATCAAATGAAAGAAGATCCTTAC
196 TCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATCATGAAATGAATGAAGATCCTTAC
* * *
5495 TAGAATCCATGTTTGTGTCATTTGCGGAATGAACTTATATTTTACAAAAATAGGTGGGAAGAAAG
261 TAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTACAAAAATAGGTGGGAAGAAAG
*
5560 CGTATCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGTGCC
326 CGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGTGCC
*
5625 TAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGTCTTATTTTATAGACAAACTTT
391 TAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGTCTTATTTTAGAGACAAACTTT
*
5690 GATTCTATCAATAACGGTAGA
456 GATTCTATCAATAACGGTAGG
* * *
5711 AAGAAAGGCTTCTCTTGCGACCCCAAAGCGTTAATGTCTTGTATCCTAATGAAAGGAATGTGTTT
1 AAGAAAAGCTTCTCTTGTGACCCCAAAGCATTAATGTCTTGTATCCTAATGAAAGGAATGTGTTT
5776 TTGGTTCCCAATCTTTTCAAGATTAGGGACTTTTATGAGAATCAATGCATGTCTCATTTAAAGTA
66 TTGGTTCCCAATCTTTTCAAGATTAGGGACTTTTATGAGAATCAATGCATGTCTCATTTAAAGTA
* *
5841 CAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATACAAAAGAAAACCATAAATA
131 CAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAATA
* * * * ** *
5906 TCATTTATCCTAATGAGAAGAATGTGTTTATGGTGCCTAATTATGAAATGAATGAAGATCCTTAC
196 TCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATCATGAAATGAATGAAGATCCTTAC
5971 TAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTACAAAAATAGGTGGGAAGAAAG
261 TAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTACAAAAATAGGTGGGAAGAAAG
* * * *
6036 CGTATCTTGCGAAACCAAAGCTTCAAAATCATGTATCTTTATGAGAAAACTATGTTTAAGATGCC
326 CGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGTGCC
* *
6101 TAATCCTG-AAAGAAAGGGGATTAGTATGAGTATTCTTGCTTGTCTTATTTAAGAGACAAACTTT
391 TAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGTCTTATTTTAGAGACAAACTTT
*
6165 GATTCTATCAATAACGGTAGA
456 GATTCTATCAATAACGGTAGG
* * *
6186 AAGAAAGGCTTCTCTTGTGACCCCAAAGCATTAATGTCTT-TATCATAATGAAAGGAATGTGTTC
1 AAGAAAAGCTTCTCTTGTGACCCCAAAGCATTAATGTCTTGTATCCTAATGAAAGGAATGTGTTT
* *** * * * * * *
6250 TTGGTTCCCATTCTTGAAAAGAATGGGGCCTTTTACGAGAATCAATGCATGACTCATTTCAAGTA
66 TTGGTTCCCAATCTTTTCAAGATTAGGGACTTTTATGAGAATCAATGCATGTCTCATTTAAAGTA
6315 CAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAATA
131 CAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAATA
* *
6380 TCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATCATCAAATGAAAGAAGATCCTTAC
196 TCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATCATGAAATGAATGAAGATCCTTAC
* * *
6445 TAGAATCCATGTTTGTGTCATTTGCGGAATGAACTTATATTTTACAAAAATAGGTGGGAAGAAAG
261 TAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTACAAAAATAGGTGGGAAGAAAG
*
6510 CGTATCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGTGCC
326 CGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGTGCC
* *
6575 TAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTAGTCTTATTTTATAGACAAACTTT
391 TAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGTCTTATTTTAGAGACAAACTTT
6640 GATTCTATCAATAACGGTAGG
456 GATTCTATCAATAACGGTAGG
* *
6661 AAGAAAAGCTTCTCTTGCGACCCCAAAGCATTAATGTCTTGTATCCCAATGAAAGGAATGTGTTT
1 AAGAAAAGCTTCTCTTGTGACCCCAAAGCATTAATGTCTTGTATCCTAATGAAAGGAATGTGTTT
* *
6726 TTGGTTTCCAATCTTTTCAAGATTAGGGACTTTTATGAGAATCAATGCATGTCCCATTTAAAGTA
66 TTGGTTCCCAATCTTTTCAAGATTAGGGACTTTTATGAGAATCAATGCATGTCTCATTTAAAGTA
*
6791 TAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAATA
131 CAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAATA
* *
6856 TCATGTATCATGATGAGGAGAATGTGTTTATACAGCCTAATCACGAAATGAATGAAGATCCTTAC
196 TCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATCATGAAATGAATGAAGATCCTTAC
* * *
6921 CAGAATCCATATTTGTCTCATTTGAGGAATGAACTTATACTTTACAAAAAACAGGTGGGAAGAAA
261 TAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTAC-AAAAATAGGTGGGAAGAAA
* *
6986 GCGTATCTTACGAAACCAAAGCGTCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGTGC
325 GCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGTGC
*
7051 CTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGTCTTATTTTATAGACAAACTT
390 CTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGTCTTATTTTAGAGACAAACTT
7116 TGATTCTATCAATAACGGTAGG
455 TGATTCTATCAATAACGGTAGG
*
7138 AAGAAAAGCTTCTCTTGCGACCCCAAAGCATTAATGTCTTGTATCCTAATGAAAGGAATGTGTTT
1 AAGAAAAGCTTCTCTTGTGACCCCAAAGCATTAATGTCTTGTATCCTAATGAAAGGAATGTGTTT
7203 TTGGTTCCCAATCTTTTCAAGATTAGGGACTTTTATGAGAATCAATGCATGTCTCATTTAAAGTA
66 TTGGTTCCCAATCTTTTCAAGATTAGGGACTTTTATGAGAATCAATGCATGTCTCATTTAAAGTA
* *
7268 CAAACTTTGA-TTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATACAAAAGAAAACCATAAATA
131 CAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAATA
* * * * ** *
7332 TCATTTATCCTAATGAGAAGAATGTGTTTATGGTGCCTAATTATGAAATGAATGAAGATCCTTAC
196 TCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATCATGAAATGAATGAAGATCCTTAC
7397 TAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTACAAAAATAGGTGGGAAGAAAG
261 TAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTACAAAAATAGGTGGGAAGAAAG
* * * *
7462 CGTATCTTGCGAAACCAAAGCTTCAAAATCATGTATCTTTATGAGAAAACTATGTTTAAGATGCC
326 CGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGTGCC
* *
7527 TAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGCTTGTCTTATTTAAGAGACAAACTTT
391 TAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGTCTTATTTTAGAGACAAACTTT
*
7592 GATTCTATCAATAACGGTAGA
456 GATTCTATCAATAACGGTAGG
* *
7613 AAGAAAGGCTTCTCTTGTGACCCCAAAGCATTAATGTCTT-TATCATAATGAAAGGAATGTGTTT
1 AAGAAAAGCTTCTCTTGTGACCCCAAAGCATTAATGTCTTGTATCCTAATGAAAGGAATGTGTTT
* *** * * * *
7677 TTGGTTCCCATTCTTGAAAAGAATGGGGCCTTTTATGAGAATCAATGCATGACTCATTTAAAGTA
66 TTGGTTCCCAATCTTTTCAAGATTAGGGACTTTTATGAGAATCAATGCATGTCTCATTTAAAGTA
*
7742 TAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAATA
131 CAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAATA
*
7807 TCATGTATCATGATGAGGAGAATGTGTTTATA-TAGCCTAATCACGAAATGAATGAAGATCCTTA
196 TCATGTATCATGATGAGGAGAATGTGTTTATACT-GCCTAATCATGAAATGAATGAAGATCCTTA
* * *
7871 CCAGAATCCATGTTTCTCTCATTTGAGGAATGAACTTATACTTTACAAAAACAGGTGGGAAGAAA
260 CTAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTACAAAAATAGGTGGGAAGAAA
*
7936 GCGTATCTTGCGAAACCAAAGCGTCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGTGC
325 GCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGTGC
* *
8001 CTAATCCTGAAAAGAAAGGTGATTAGTATGAGTATTCTTGTTTGTCTTATTTTATAGACAAACTT
390 CTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGTCTTATTTTAGAGACAAACTT
*
8066 TGATTCTATCAATAACGATAGG
455 TGATTCTATCAATAACGGTAGG
* *
8088 AAG-AAAGCTTCTCTTGCGACCCCAAAGCATTAATGTCTTGTATCCTACTGAAAGGAATGTGTTT
1 AAGAAAAGCTTCTCTTGTGACCCCAAAGCATTAATGTCTTGTATCCTAATGAAAGGAATGTGTTT
8152 TTGGTTCCCAATCTTTTCAAGATT-GAGGACTTTTATGAGAATCAATGCATGTCTCATTTAAAGT
66 TTGGTTCCCAATCTTTTCAAGATTAG-GGACTTTTATGAGAATCAATGCATGTCTCATTTAAAGT
* *
8216 ACAAACTTTGATTTTAAGGAAAAATAAGGCAAAGAAAAGATTTCCATACAAAAGAAAACCATAAA
130 ACAAACTTTGATTTTAAGG-AAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAA
* * * * ** *
8281 TATCATTTATCCTAATGAGAAGAATGTGTTTTATGGTGCCTAATTATGAAATGAATGAAGATCCT
194 TATCATGTATCATGATGAGGAGAATGTG-TTTATACTGCCTAATCATGAAATGAATGAAGATCCT
8346 TACTAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTACAAAAATAGGTGGGAAGA
258 TACTAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTACAAAAATAGGTGGGAAGA
* * * *
8411 AAGCGTATCTTGCGAAACCAAAGCTTCAATATCACGTATCTTTATGAGAAAACTATGTTTAAGAT
323 AAGCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGT
* *
8476 GCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGCTTGTCTTATTTAAGAGACAAAC
388 GCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGTCTTATTTTAGAGACAAAC
* * *
8541 TTAGATTCTATCAATAACGGTTGA
453 TTTGATTCTATCAATAACGGTAGG
* *
8565 AAGAAAAGCTTCTCTTGTGACCCCAAAGCATTAATGTCTT-TATCATAATGAAAGGAATGTGTTC
1 AAGAAAAGCTTCTCTTGTGACCCCAAAGCATTAATGTCTTGTATCCTAATGAAAGGAATGTGTTT
* *** * * * * * *
8629 TTGGTTCCCATTCTTGAAAAGAATGGGGCCTTTTACGAGAATCAATGCATGACTCATTTCAAGTA
66 TTGGTTCCCAATCTTTTCAAGATTAGGGACTTTTATGAGAATCAATGCATGTCTCATTTAAAGTA
8694 CAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAATA
131 CAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAATA
* * *
8759 TCATGTATCATGATGAGGAGAATGTGTTTATACTACCTAATCATCAAATGAAAGAAGATCCTTAC
196 TCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATCATGAAATGAATGAAGATCCTTAC
*
8824 TAGAATCCATGTTTGTCTCATTTGCGGAATGAACTTATACTTTACAAAAAATAGGTGGGAAGAAA
261 TAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTAC-AAAAATAGGTGGGAAGAAA
*
8889 GCGTATCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGTGC
325 GCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGTGC
* *
8954 CTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGTCCTATTTTATAGACAAACTT
390 CTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGTCTTATTTTAGAGACAAACTT
*
9019 TGATTCTATCAGTAACGGTAGG
455 TGATTCTATCAATAACGGTAGG
*
9041 AAGAAAAGCTTCTCTTGCGACCCCAAAGCATTAATGTCTTGTATCCTAATGAAAGGAATGTGTTT
1 AAGAAAAGCTTCTCTTGTGACCCCAAAGCATTAATGTCTTGTATCCTAATGAAAGGAATGTGTTT
9106 TTGGTTCCCAATCTTTTCAAGATTAGGGACTTTTATGAGAATCAATGCATGTCTCATTTAAAGTA
66 TTGGTTCCCAATCTTTTCAAGATTAGGGACTTTTATGAGAATCAATGCATGTCTCATTTAAAGTA
* * *
9171 CAAACTTTGATTTTAAGGAAAACAAGGCAAAGAAAAGATTTCCATACAAAAGAAAACCATAAATA
131 CAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAATA
* * * * ** *
9236 TCATTTATCCTAATGAGAAGAATGTGTTTATGGTGCCTAATTATGAAATGAATGAAGATCCTTAC
196 TCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATCATGAAATGAATGAAGATCCTTAC
9301 TAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTACAAAAATAGGTGGGAAGAAAG
261 TAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTACAAAAATAGGTGGGAAGAAAG
*
9366 CGTATCTTGTGAAACCAAAGCTTCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGTGCC
326 CGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGTGCC
*
9431 TAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGTCTTATTTTAGAGACAAAGTTT
391 TAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGTCTTATTTTAGAGACAAACTTT
9496 GATTCTATCAATAACGGTAGG
456 GATTCTATCAATAACGGTAGG
*
9517 AAGAAAAGCTTCTCTTGTGACCCCAAAGTATTAATGTCTTGTATCCTAATGAAAGGAATGTGTTT
1 AAGAAAAGCTTCTCTTGTGACCCCAAAGCATTAATGTCTTGTATCCTAATGAAAGGAATGTGTTT
* ***
9582 TTCGTTCCCAATCTTGGAAAGATTAGGGACTTTTATGAGAATCAATGCATGTCTCATTTAAAGTA
66 TTGGTTCCCAATCTTTTCAAGATTAGGGACTTTTATGAGAATCAATGCATGTCTCATTTAAAGTA
*
9647 CAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCTATGCAAAAGAAAACCATCAATA
131 CAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAATA
* * *
9712 TCATGTATCATGATGAGGAGAATGTGTTCATACTGCCTAATCACGAAATGAATAAAGATCCTTAC
196 TCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATCATGAAATGAATGAAGATCCTTAC
9777 TAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTACAAAAATAGGTGGGAAGAAAG
261 TAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTACAAAAATAGGTGGGAAGAAAG
*
9842 CGTATCTTGTGAAACCAAAGCTTCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGTGCC
326 CGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGTGCC
*
9907 TAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGTCTTATTTTAGAGACAAAGTTT
391 TAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGTCTTATTTTAGAGACAAACTTT
*
9972 GATTTTATCAATAACGGTAGG
456 GATTCTATCAATAACGGTAGG
*
9993 AAGAAAAGCTTCTCTTGTGACCCCAAAGTATTAATGTCTTGTATCCTAATGAAAGGAATGTGTTT
1 AAGAAAAGCTTCTCTTGTGACCCCAAAGCATTAATGTCTTGTATCCTAATGAAAGGAATGTGTTT
10058 TTGGTTCCCAATCTTTTCAAGATTAGGGACTTTTATGAGAATCAATGCATGTCTCATTTAAAGTA
66 TTGGTTCCCAATCTTTTCAAGATTAGGGACTTTTATGAGAATCAATGCATGTCTCATTTAAAGTA
*
10123 CAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCTATGCAAAAGAAAACCATCAATA
131 CAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAATA
10188 TCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATCATGAAATGAATGAAGATCCTTAC
196 TCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATCATGAAATGAATGAAGATCCTTAC
*
10253 TAGAATCCGTGTTTGTCTCATTTGAGGAATGAACTTATACTTTACAAAAATAGGTGGGAAGAAAG
261 TAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTACAAAAATAGGTGGGAAGAAAG
* * * * *
10318 CGTATCTTGCGAAACCAAAGCTTCAAAATCATGTATCTTTATGCGAAAACTATGTTTACGATGCC
326 CGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGTGCC
* *
10383 TAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGCTTGTCTTATTTAAGAGACAAACTTT
391 TAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGTCTTATTTTAGAGACAAACTTT
* *
10448 GATTCTATCAATAATGGTAGA
456 GATTCTATCAATAACGGTAGG
* * * *
10469 AAGAAAGGCTTCTCTTGTGACCCCAAAGCATTAATGACTT-TATCATAAAGAAAGGAATGTGTTT
1 AAGAAAAGCTTCTCTTGTGACCCCAAAGCATTAATGTCTTGTATCCTAATGAAAGGAATGTGTTT
* *** * * * * * * *
10533 TTGGTTCCCATTCTTGAAAAGAATGGGGCCTTTTACGAGAATCAAGGCACGACTCATTTAAAGTA
66 TTGGTTCCCAATCTTTTCAAGATTAGGGACTTTTATGAGAATCAATGCATGTCTCATTTAAAGTA
* * *
10598 TAAACTTTGATTTGAAGGAAAATAAGACAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAATA
131 CAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAATA
* *
10663 TCATGTATCATGAAGAGGAGAATGTGTTTCTACTGCCTAATCATGAAATGAATGAAGATCCTTAC
196 TCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATCATGAAATGAATGAAGATCCTTAC
*
10728 CAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTACAAAAATAGGTGGGAAGAAAG
261 TAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTACAAAAATAGGTGGGAAGAAAG
* * * *
10793 CGTATCTTGCGAAACCAAAGCTTCAAAATCATGTATCTTTATGAGAAAACTATGTTTACGATGCC
326 CGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGTGCC
* *
10858 TAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGCTTGTCTTATTTAAGAGACAAACTTT
391 TAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGTCTTATTTTAGAGACAAACTTT
* *
10923 GATTCTATCAATAATGGTAGA
456 GATTCTATCAATAACGGTAGG
* *
10944 AAGAAAGGCTTCTCTTGTGACCCCAAAGCATTAATGTCTT-TATCATAATGAAAGGAATGTGTTT
1 AAGAAAAGCTTCTCTTGTGACCCCAAAGCATTAATGTCTTGTATCCTAATGAAAGGAATGTGTTT
* *** * * * * *
11008 TTGGTTCCCATTCTTGAAAAGAATGGGGCCTTTTACGAGAATCAATGCATGACTCATTTAAAGTA
66 TTGGTTCCCAATCTTTTCAAGATTAGGGACTTTTATGAGAATCAATGCATGTCTCATTTAAAGTA
*
11073 TAAACTTTGATTTTAAGGAAAATAAGGCAAAG-AAAGATTTCCATGC-AAAGAAAACCATCAATA
131 CAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAATA
11136 TCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATCATGAAATGAATGAAGATCCTTAC
196 TCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATCATGAAATGAATGAAGATCCTTAC
*
11201 TAGAATCCATGTTTGTCTCATTTGACGAATGAACTTATACTTTACAAAAATAGGTGGGAAGAAAG
261 TAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTACAAAAATAGGTGGGAAGAAAG
* * * *
11266 CGTATCCTGCGAAACCAAAGCTTCAATATCATGTATCTTTATGAGAAAACTATGTTTACGATGCC
326 CGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGTGCC
*
11331 TAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGCTTGTCTTA-TTTAGAGACAAACTTT
391 TAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGTCTTATTTTAGAGACAAACTTT
*
11395 GATTCTATCAATAACGGTAGA
456 GATTCTATCAATAACGGTAGG
* * *
11416 AAGAAAGGCTTCTCTTGTGACCCCAAAGCATTACTGTCTT-TATCATAATGAAAGGAATGTGTTT
1 AAGAAAAGCTTCTCTTGTGACCCCAAAGCATTAATGTCTTGTATCCTAATGAAAGGAATGTGTTT
* *** * * * * *
11480 TTGGTTCCCATTCTTGAAAAGAATGGGGCCTTTTACGAGAATCAATGCATGACTCATTTAAAGTA
66 TTGGTTCCCAATCTTTTCAAGATTAGGGACTTTTATGAGAATCAATGCATGTCTCATTTAAAGTA
*
11545 TAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAATA
131 CAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAATA
11610 TCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATCATGAAATGAATGAAGATCCTTAC
196 TCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATCATGAAATGAATGAAGATCCTTAC
11675 TAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTACAAAAATAGGTGGGAAGAAAA
261 TAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTACAAAAATAGGTGGGAAG-AAA
*
11740 GCGTATCCTGCGAAACCAAAGCTTCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGTGC
325 GCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGTGC
*
11805 CTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGTCTTATTTTATAGACAAACTT
390 CTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGTCTTATTTTAGAGACAAACTT
11870 TGATTCTATCAATAACGGTAGG
455 TGATTCTATCAATAACGGTAGG
* *
11892 AAGAAAAGCTTCTCTTGCGACCCCAAAGCATTAATGTCTTGTATCCCAATGAAAGGAATGTGTTT
1 AAGAAAAGCTTCTCTTGTGACCCCAAAGCATTAATGTCTTGTATCCTAATGAAAGGAATGTGTTT
* *
11957 TTGGTTTCCAATCTTTTCAAGATTAGGGACTTTTATGAGAATCAATGCATGTCCCATTTAAAGTA
66 TTGGTTCCCAATCTTTTCAAGATTAGGGACTTTTATGAGAATCAATGCATGTCTCATTTAAAGTA
*
12022 CAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATACAAAAGAAAACCATCAATA
131 CAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAATA
12087 TCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATCATGAAATGAATGAAGATCCTTAC
196 TCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATCATGAAATGAATGAAGATCCTTAC
12152 TAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTACAAAAATAGGTGGGAAGAAAG
261 TAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTACAAAAATAGGTGGGAAGAAAG
* * *
12217 CGTATCTTGCGAAACCAAATCTTCAATATCTTGTATCCTTATGAGAAGACTATGTTTATGGTGCC
326 CGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGTGCC
*
12282 TAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGTCTTATTTTATAGACAAACTTT
391 TAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGTCTTATTTTAGAGACAAACTTT
12347 GATTCTATCAATAACGGTAGG
456 GATTCTATCAATAACGGTAGG
* *
12368 AAGAAAAGCTTCTCTTGCGACCCCAAAGCATTAATGTCTTGTATCCCAATGAAAGGAATGTGTTT
1 AAGAAAAGCTTCTCTTGTGACCCCAAAGCATTAATGTCTTGTATCCTAATGAAAGGAATGTGTTT
* *
12433 TTGGTTTCCAATCTTTTCAAGATTAGGGACTTTTATGAGAATCAATGCATGTCCCATTT-AAGTA
66 TTGGTTCCCAATCTTTTCAAGATTAGGGACTTTTATGAGAATCAATGCATGTCTCATTTAAAGTA
* ** * * *
12497 AAAACTAAGA-TTTAAGAAAAATAAGGCAAAGAAAAGATTTCCATAC-AAAGAAAACCATAAATA
131 CAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAATA
* * * * **
12560 TCATTTATCCTAATGAGAAGAATGTGTTTATGGTGCCTAAT-ATGAAATGAATGAAGATCCTTAC
196 TCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATCATGAAATGAATGAAGATCCTTAC
12624 TAGAATCCATGTTTGTCTCA-TTGAGGAATGAACTTATACTTTAC-AAAATA-GTGGGAAGAAAG
261 TAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTACAAAAATAGGTGGGAAGAAAG
* ***
12686 CGTATCTTGCGAAACCAAAGCTTCAA-ATCATGTATCTTTATGAGAAAACTATGTTTACAATGGC
326 CGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGT-GC
* *
12750 CTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGCTTGTC-TATTTAAGAGAC-AACTT
390 CTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGTCTTATTTTAGAGACAAACTT
*
12813 TGATTCTATC-ATAACGGTAGA
455 TGATTCTATCAATAACGGTAGG
* *
12834 AAGCAAGGCTTCTCT
1 AAGAAAAGCTTCTCT
Statistics
Matches: 8039, Mismatches: 502, Indels: 55
0.94 0.06 0.01
Matches are distributed among these distances:
466 23 0.00
467 15 0.00
468 39 0.00
469 84 0.01
470 6 0.00
471 24 0.00
472 238 0.03
473 319 0.04
474 642 0.08
475 2523 0.31
476 2953 0.37
477 1136 0.14
478 37 0.00
ACGTcount: A:0.36, C:0.15, G:0.18, T:0.31
Consensus pattern (476 bp):
AAGAAAAGCTTCTCTTGTGACCCCAAAGCATTAATGTCTTGTATCCTAATGAAAGGAATGTGTTT
TTGGTTCCCAATCTTTTCAAGATTAGGGACTTTTATGAGAATCAATGCATGTCTCATTTAAAGTA
CAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAATA
TCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATCATGAAATGAATGAAGATCCTTAC
TAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTACAAAAATAGGTGGGAAGAAAG
CGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGTGCC
TAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGTCTTATTTTAGAGACAAACTTT
GATTCTATCAATAACGGTAGG
Found at i:5655 original size:951 final size:951
Alignment explanation
Indices: 3808--12848 Score: 14816
Period size: 951 Copynumber: 9.5 Consensus size: 951
3798 ATCATCAAAT
* * * *
3808 GAAAGAAAGGCTTCTCTTGTGACCCCAAAGCATTAATGACTTCATCATAAAGAAAGGAATGTGTT
1 GAAAGAAAAGCTTCTCTTGTGACCCCAAAGCATTAATGTCTTTATCATAATGAAAGGAATGTGTT
* * * * * *
3873 TTTGGTTCCCATTCTTGAAAAGAATGGGGCCTTTTACGAGAATCAAGGCACGACTCATTTAAAGT
66 TTTGGTTCCCAATCTTGAAAAGAATAGGGACTTTTATGAGAATCAATGCATGACTCATTTAAAGT
3938 ATAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAAT
131 ATAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAAT
* *
4003 ATCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATCATCAAATGAAAGAAGATCCTTA
196 ATCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATCATGAAATGAATGAAGATCCTTA
*
4068 CTAGAATCCATGTTTGTCTCATTTGCGGAATGAACTTATACTTTACAAAAATAGGTGGGAAGAAA
261 CTAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTACAAAAATAGGTGGGAAGAAA
*
4133 GCGTATCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGTGC
326 GCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGTGC
* *
4198 CTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGTCCTATTTTATAGACAAACTT
391 CTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGTCTTATTTTAGAGACAAACTT
*
4263 TGATTCTATCAGTAACGGTAGGAAGAAAAGCTTCTCTTGCGACCCCAAAGCATTAATGTCTTGTA
456 TGATTCTATCAATAACGGTAGGAAGAAAAGCTTCTCTTGCGACCCCAAAGCATTAATGTCTTGTA
4328 TCCTAATGAAAGGAATGTGTTTTTGGTTCCCAATCTTTTCAAGATTAGGGACTTTTATGAGAATC
521 TCCTAATGAAAGGAATGTGTTTTTGGTTCCCAATCTTTTCAAGATTAGGGACTTTTATGAGAATC
*
4393 AATGCATGTCTCATTTAAAGTACAAACTTTGATTTTAAGGAAAACAAGGCAAAGAAAAGATTTCC
586 AATGCATGTCTCATTTAAAGTACAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCC
4458 ATGCAAAAGAAAACCATCAATATCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATCA
651 ATGCAAAAGAAAACCATCAATATCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATCA
* * *
4523 TCAAATGAAAGAAGATCCTTACTAGAATCCATGTTTGTCTCATTTGCGGAATGAACTTATACTTT
716 TGAAATGAATGAAGATCCTTACTAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTT
*
4588 ACAAAAATAGGTGGGAAGAAAGCGTATCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATG
781 ACAAAAATAGGTGGGAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCCTTATG
4653 AGAAAACTATGTTTATGGTGCCTAATCCTG-AAAGAAAGGGGATTAGTATGAGTATTCTTGTTTG
846 AGAAAACTATGTTTATGGTGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTG
* * *
4717 TCCTATTTTATAGACAAACTTTGATTCTATCAGTAACGGTA
911 TCTTATTTTAGAGACAAACTTTGATTCTATCAATAACGGTA
* * * *
4758 GGAAGAAAAGCTTCTCTTGCGACCCCAAAGCATTAATGTCTTGCATCCTAATGAAAGGAATGTGT
1 GAAAGAAAAGCTTCTCTTGTGACCCCAAAGCATTAATGTCTT-TATCATAATGAAAGGAATGTGT
*** * *
4823 TTTTGGTTCCCAATCTTTTCAAGATTAGGGACTTTTATGAGAATCAATGCATGTCTCATTTAAAG
65 TTTTGGTTCCCAATCTTGAAAAGAATAGGGACTTTTATGAGAATCAATGCATGACTCATTTAAAG
* * * *
4888 TACAAACTTTGATTTTAAGGAAAACAAGGCAAAGAAAAGATTTCCATACAAAAGAAAACCATAAA
130 TATAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAA
* * * ** *
4953 TATCATTTATCCTAATGAGGAGAATGTGTTTATGGTGCCTAATTATGAAATGAATGAAGATCCTT
195 TATCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATCATGAAATGAATGAAGATCCTT
*
5018 ACTAGAATCTATGTTTGTCTCATTTGAGGAATGAACTTATACTTTACAAAAATAGGTGGGAAGAA
260 ACTAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTACAAAAATAGGTGGGAAGAA
* * * *
5083 AGCGTATCTTGCGAAACCAAAGCTTCAATATCACGTATCTTTATGAGAAAAATATGTTTATGATG
325 AGCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGTG
* * *
5148 CCTAATCCTGAAAAGAAAGGGGATTAGTACGAGTATTCTTGCTTGTCTTATTTAAGAGACAAACT
390 CCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGTCTTATTTTAGAGACAAACT
* * * * *
5213 TAGATTCTATCAATTACGGTAGAAAGAAAAGCTTCTCTTGTGACCCCAAATCATTAATGTCTT-T
455 TTGATTCTATCAATAACGGTAGGAAGAAAAGCTTCTCTTGCGACCCCAAAGCATTAATGTCTTGT
* * * *** * * * *
5277 ATCATAATGAAAGGAATGTGTTCTTGGTTCCCATTCTTGAAAAGAATGGGGCCTTTTACGAGAAT
520 ATCCTAATGAAAGGAATGTGTTTTTGGTTCCCAATCTTTTCAAGATTAGGGACTTTTATGAGAAT
* *
5342 CAATGCATGACTCATTTCAAGTACAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTC
585 CAATGCATGTCTCATTTAAAGTACAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTC
*
5407 CATGCAAAAGAAAACCATCAATATCATGTATCATGATAAGGAGAATGTGTTTATACTGCCTAATC
650 CATGCAAAAGAAAACCATCAATATCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATC
* * * * *
5472 ATCAAATGAAAGAAGATCCTTACTAGAATCCATGTTTGTGTCATTTGCGGAATGAACTTATATTT
715 ATGAAATGAATGAAGATCCTTACTAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTT
*
5537 TACAAAAATAGGTGGGAAGAAAGCGTATCTTGCGAAACCAAAGCATCAATATCATGTATCCTTAT
780 TACAAAAATAGGTGGGAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCCTTAT
5602 GAGAAAACTATGTTTATGGTGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTT
845 GAGAAAACTATGTTTATGGTGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTT
*
5667 GTCTTATTTTATAGACAAACTTTGATTCTATCAATAACGGTA
910 GTCTTATTTTAGAGACAAACTTTGATTCTATCAATAACGGTA
* * * *
5709 GAAAGAAAGGCTTCTCTTGCGACCCCAAAGCGTTAATGTCTTGTATCCTAATGAAAGGAATGTGT
1 GAAAGAAAAGCTTCTCTTGTGACCCCAAAGCATTAATGTCTT-TATCATAATGAAAGGAATGTGT
*** * *
5774 TTTTGGTTCCCAATCTTTTCAAGATTAGGGACTTTTATGAGAATCAATGCATGTCTCATTTAAAG
65 TTTTGGTTCCCAATCTTGAAAAGAATAGGGACTTTTATGAGAATCAATGCATGACTCATTTAAAG
* * *
5839 TACAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATACAAAAGAAAACCATAAA
130 TATAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAA
* * * * ** *
5904 TATCATTTATCCTAATGAGAAGAATGTGTTTATGGTGCCTAATTATGAAATGAATGAAGATCCTT
195 TATCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATCATGAAATGAATGAAGATCCTT
5969 ACTAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTACAAAAATAGGTGGGAAGAA
260 ACTAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTACAAAAATAGGTGGGAAGAA
* * * *
6034 AGCGTATCTTGCGAAACCAAAGCTTCAAAATCATGTATCTTTATGAGAAAACTATGTTTAAGATG
325 AGCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGTG
* *
6099 CCTAATCCTG-AAAGAAAGGGGATTAGTATGAGTATTCTTGCTTGTCTTATTTAAGAGACAAACT
390 CCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGTCTTATTTTAGAGACAAACT
* * *
6163 TTGATTCTATCAATAACGGTAGAAAGAAAGGCTTCTCTTGTGACCCCAAAGCATTAATGTCTT-T
455 TTGATTCTATCAATAACGGTAGGAAGAAAAGCTTCTCTTGCGACCCCAAAGCATTAATGTCTTGT
* * * *** * * * *
6227 ATCATAATGAAAGGAATGTGTTCTTGGTTCCCATTCTTGAAAAGAATGGGGCCTTTTACGAGAAT
520 ATCCTAATGAAAGGAATGTGTTTTTGGTTCCCAATCTTTTCAAGATTAGGGACTTTTATGAGAAT
* *
6292 CAATGCATGACTCATTTCAAGTACAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTC
585 CAATGCATGTCTCATTTAAAGTACAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTC
6357 CATGCAAAAGAAAACCATCAATATCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATC
650 CATGCAAAAGAAAACCATCAATATCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATC
* * * * *
6422 ATCAAATGAAAGAAGATCCTTACTAGAATCCATGTTTGTGTCATTTGCGGAATGAACTTATATTT
715 ATGAAATGAATGAAGATCCTTACTAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTT
*
6487 TACAAAAATAGGTGGGAAGAAAGCGTATCTTGCGAAACCAAAGCATCAATATCATGTATCCTTAT
780 TACAAAAATAGGTGGGAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCCTTAT
*
6552 GAGAAAACTATGTTTATGGTGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTA
845 GAGAAAACTATGTTTATGGTGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTT
*
6617 GTCTTATTTTATAGACAAACTTTGATTCTATCAATAACGGTA
910 GTCTTATTTTAGAGACAAACTTTGATTCTATCAATAACGGTA
* * **
6659 GGAAGAAAAGCTTCTCTTGCGACCCCAAAGCATTAATGTCTTGTATCCCAATGAAAGGAATGTGT
1 GAAAGAAAAGCTTCTCTTGTGACCCCAAAGCATTAATGTCTT-TATCATAATGAAAGGAATGTGT
* *** * * *
6724 TTTTGGTTTCCAATCTTTTCAAGATTAGGGACTTTTATGAGAATCAATGCATGTCCCATTTAAAG
65 TTTTGGTTCCCAATCTTGAAAAGAATAGGGACTTTTATGAGAATCAATGCATGACTCATTTAAAG
6789 TATAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAA
130 TATAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAA
* *
6854 TATCATGTATCATGATGAGGAGAATGTGTTTATACAGCCTAATCACGAAATGAATGAAGATCCTT
195 TATCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATCATGAAATGAATGAAGATCCTT
* * *
6919 ACCAGAATCCATATTTGTCTCATTTGAGGAATGAACTTATACTTTACAAAAAACAGGTGGGAAGA
260 ACTAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTAC-AAAAATAGGTGGGAAGA
* *
6984 AAGCGTATCTTACGAAACCAAAGCGTCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGT
324 AAGCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGT
*
7049 GCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGTCTTATTTTATAGACAAAC
389 GCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGTCTTATTTTAGAGACAAAC
7114 TTTGATTCTATCAATAACGGTAGGAAGAAAAGCTTCTCTTGCGACCCCAAAGCATTAATGTCTTG
454 TTTGATTCTATCAATAACGGTAGGAAGAAAAGCTTCTCTTGCGACCCCAAAGCATTAATGTCTTG
7179 TATCCTAATGAAAGGAATGTGTTTTTGGTTCCCAATCTTTTCAAGATTAGGGACTTTTATGAGAA
519 TATCCTAATGAAAGGAATGTGTTTTTGGTTCCCAATCTTTTCAAGATTAGGGACTTTTATGAGAA
7244 TCAATGCATGTCTCATTTAAAGTACAAACTTTGA-TTTAAGGAAAATAAGGCAAAGAAAAGATTT
584 TCAATGCATGTCTCATTTAAAGTACAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTT
* * * * * * **
7308 CCATACAAAAGAAAACCATAAATATCATTTATCCTAATGAGAAGAATGTGTTTATGGTGCCTAAT
649 CCATGCAAAAGAAAACCATCAATATCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAAT
*
7373 TATGAAATGAATGAAGATCCTTACTAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACT
714 CATGAAATGAATGAAGATCCTTACTAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACT
* *
7438 TTACAAAAATAGGTGGGAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAAAATCATGTATCTTTA
779 TTACAAAAATAGGTGGGAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCCTTA
* * *
7503 TGAGAAAACTATGTTTAAGATGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGCT
844 TGAGAAAACTATGTTTATGGTGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTT
*
7568 TGTCTTATTTAAGAGACAAACTTTGATTCTATCAATAACGGTA
909 TGTCTTATTTTAGAGACAAACTTTGATTCTATCAATAACGGTA
*
7611 GAAAGAAAGGCTTCTCTTGTGACCCCAAAGCATTAATGTCTTTATCATAATGAAAGGAATGTGTT
1 GAAAGAAAAGCTTCTCTTGTGACCCCAAAGCATTAATGTCTTTATCATAATGAAAGGAATGTGTT
* * *
7676 TTTGGTTCCCATTCTTGAAAAGAATGGGGCCTTTTATGAGAATCAATGCATGACTCATTTAAAGT
66 TTTGGTTCCCAATCTTGAAAAGAATAGGGACTTTTATGAGAATCAATGCATGACTCATTTAAAGT
7741 ATAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAAT
131 ATAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAAT
*
7806 ATCATGTATCATGATGAGGAGAATGTGTTTATA-TAGCCTAATCACGAAATGAATGAAGATCCTT
196 ATCATGTATCATGATGAGGAGAATGTGTTTATACT-GCCTAATCATGAAATGAATGAAGATCCTT
* * *
7870 ACCAGAATCCATGTTTCTCTCATTTGAGGAATGAACTTATACTTTACAAAAACAGGTGGGAAGAA
260 ACTAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTACAAAAATAGGTGGGAAGAA
*
7935 AGCGTATCTTGCGAAACCAAAGCGTCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGTG
325 AGCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGTG
* *
8000 CCTAATCCTGAAAAGAAAGGTGATTAGTATGAGTATTCTTGTTTGTCTTATTTTATAGACAAACT
390 CCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGTCTTATTTTAGAGACAAACT
*
8065 TTGATTCTATCAATAACGATAGGAAG-AAAGCTTCTCTTGCGACCCCAAAGCATTAATGTCTTGT
455 TTGATTCTATCAATAACGGTAGGAAGAAAAGCTTCTCTTGCGACCCCAAAGCATTAATGTCTTGT
*
8129 ATCCTACTGAAAGGAATGTGTTTTTGGTTCCCAATCTTTTCAAGATT-GAGGACTTTTATGAGAA
520 ATCCTAATGAAAGGAATGTGTTTTTGGTTCCCAATCTTTTCAAGATTAG-GGACTTTTATGAGAA
8193 TCAATGCATGTCTCATTTAAAGTACAAACTTTGATTTTAAGGAAAAATAAGGCAAAGAAAAGATT
584 TCAATGCATGTCTCATTTAAAGTACAAACTTTGATTTTAAGG-AAAATAAGGCAAAGAAAAGATT
* * * * * * **
8258 TCCATACAAAAGAAAACCATAAATATCATTTATCCTAATGAGAAGAATGTGTTTTATGGTGCCTA
648 TCCATGCAAAAGAAAACCATCAATATCATGTATCATGATGAGGAGAATGTG-TTTATACTGCCTA
*
8323 ATTATGAAATGAATGAAGATCCTTACTAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATA
712 ATCATGAAATGAATGAAGATCCTTACTAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATA
* *
8388 CTTTACAAAAATAGGTGGGAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAATATCACGTATCTT
777 CTTTACAAAAATAGGTGGGAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCCT
* *
8453 TATGAGAAAACTATGTTTAAGATGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTG
842 TATGAGAAAACTATGTTTATGGTGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTG
* * * *
8518 CTTGTCTTATTTAAGAGACAAACTTAGATTCTATCAATAACGGTT
907 TTTGTCTTATTTTAGAGACAAACTTTGATTCTATCAATAACGGTA
8563 GAAAGAAAAGCTTCTCTTGTGACCCCAAAGCATTAATGTCTTTATCATAATGAAAGGAATGTGTT
1 GAAAGAAAAGCTTCTCTTGTGACCCCAAAGCATTAATGTCTTTATCATAATGAAAGGAATGTGTT
* * * * * *
8628 CTTGGTTCCCATTCTTGAAAAGAATGGGGCCTTTTACGAGAATCAATGCATGACTCATTTCAAGT
66 TTTGGTTCCCAATCTTGAAAAGAATAGGGACTTTTATGAGAATCAATGCATGACTCATTTAAAGT
*
8693 ACAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAAT
131 ATAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAAT
* * *
8758 ATCATGTATCATGATGAGGAGAATGTGTTTATACTACCTAATCATCAAATGAAAGAAGATCCTTA
196 ATCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATCATGAAATGAATGAAGATCCTTA
*
8823 CTAGAATCCATGTTTGTCTCATTTGCGGAATGAACTTATACTTTACAAAAAATAGGTGGGAAGAA
261 CTAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTAC-AAAAATAGGTGGGAAGAA
*
8888 AGCGTATCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGTG
325 AGCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGTG
* *
8953 CCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGTCCTATTTTATAGACAAACT
390 CCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGTCTTATTTTAGAGACAAACT
*
9018 TTGATTCTATCAGTAACGGTAGGAAGAAAAGCTTCTCTTGCGACCCCAAAGCATTAATGTCTTGT
455 TTGATTCTATCAATAACGGTAGGAAGAAAAGCTTCTCTTGCGACCCCAAAGCATTAATGTCTTGT
9083 ATCCTAATGAAAGGAATGTGTTTTTGGTTCCCAATCTTTTCAAGATTAGGGACTTTTATGAGAAT
520 ATCCTAATGAAAGGAATGTGTTTTTGGTTCCCAATCTTTTCAAGATTAGGGACTTTTATGAGAAT
*
9148 CAATGCATGTCTCATTTAAAGTACAAACTTTGATTTTAAGGAAAACAAGGCAAAGAAAAGATTTC
585 CAATGCATGTCTCATTTAAAGTACAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTC
* * * * * * ** *
9213 CATACAAAAGAAAACCATAAATATCATTTATCCTAATGAGAAGAATGTGTTTATGGTGCCTAATT
650 CATGCAAAAGAAAACCATCAATATCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATC
9278 ATGAAATGAATGAAGATCCTTACTAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTT
715 ATGAAATGAATGAAGATCCTTACTAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTT
*
9343 TACAAAAATAGGTGGGAAGAAAGCGTATCTTGTGAAACCAAAGCTTCAATATCATGTATCCTTAT
780 TACAAAAATAGGTGGGAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCCTTAT
9408 GAGAAAACTATGTTTATGGTGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTT
845 GAGAAAACTATGTTTATGGTGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTT
*
9473 GTCTTATTTTAGAGACAAAGTTTGATTCTATCAATAACGGTA
910 GTCTTATTTTAGAGACAAACTTTGATTCTATCAATAACGGTA
* * *
9515 GGAAGAAAAGCTTCTCTTGTGACCCCAAAGTATTAATGTCTTGTATCCTAATGAAAGGAATGTGT
1 GAAAGAAAAGCTTCTCTTGTGACCCCAAAGCATTAATGTCTT-TATCATAATGAAAGGAATGTGT
* * * *
9580 TTTTCGTTCCCAATCTTGGAAAGATTAGGGACTTTTATGAGAATCAATGCATGTCTCATTTAAAG
65 TTTTGGTTCCCAATCTTGAAAAGAATAGGGACTTTTATGAGAATCAATGCATGACTCATTTAAAG
* *
9645 TACAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCTATGCAAAAGAAAACCATCAA
130 TATAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAA
* * *
9710 TATCATGTATCATGATGAGGAGAATGTGTTCATACTGCCTAATCACGAAATGAATAAAGATCCTT
195 TATCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATCATGAAATGAATGAAGATCCTT
9775 ACTAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTACAAAAATAGGTGGGAAGAA
260 ACTAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTACAAAAATAGGTGGGAAGAA
*
9840 AGCGTATCTTGTGAAACCAAAGCTTCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGTG
325 AGCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGTG
*
9905 CCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGTCTTATTTTAGAGACAAAGT
390 CCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGTCTTATTTTAGAGACAAACT
* * *
9970 TTGATTTTATCAATAACGGTAGGAAGAAAAGCTTCTCTTGTGACCCCAAAGTATTAATGTCTTGT
455 TTGATTCTATCAATAACGGTAGGAAGAAAAGCTTCTCTTGCGACCCCAAAGCATTAATGTCTTGT
10035 ATCCTAATGAAAGGAATGTGTTTTTGGTTCCCAATCTTTTCAAGATTAGGGACTTTTATGAGAAT
520 ATCCTAATGAAAGGAATGTGTTTTTGGTTCCCAATCTTTTCAAGATTAGGGACTTTTATGAGAAT
10100 CAATGCATGTCTCATTTAAAGTACAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTC
585 CAATGCATGTCTCATTTAAAGTACAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTC
*
10165 TATGCAAAAGAAAACCATCAATATCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATC
650 CATGCAAAAGAAAACCATCAATATCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATC
*
10230 ATGAAATGAATGAAGATCCTTACTAGAATCCGTGTTTGTCTCATTTGAGGAATGAACTTATACTT
715 ATGAAATGAATGAAGATCCTTACTAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTT
* *
10295 TACAAAAATAGGTGGGAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAAAATCATGTATCTTTAT
780 TACAAAAATAGGTGGGAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCCTTAT
* * * *
10360 GCGAAAACTATGTTTACGATGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGCTT
845 GAGAAAACTATGTTTATGGTGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTT
* *
10425 GTCTTATTTAAGAGACAAACTTTGATTCTATCAATAATGGTA
910 GTCTTATTTTAGAGACAAACTTTGATTCTATCAATAACGGTA
* * *
10467 GAAAGAAAGGCTTCTCTTGTGACCCCAAAGCATTAATGACTTTATCATAAAGAAAGGAATGTGTT
1 GAAAGAAAAGCTTCTCTTGTGACCCCAAAGCATTAATGTCTTTATCATAATGAAAGGAATGTGTT
* * * * * *
10532 TTTGGTTCCCATTCTTGAAAAGAATGGGGCCTTTTACGAGAATCAAGGCACGACTCATTTAAAGT
66 TTTGGTTCCCAATCTTGAAAAGAATAGGGACTTTTATGAGAATCAATGCATGACTCATTTAAAGT
* *
10597 ATAAACTTTGATTTGAAGGAAAATAAGACAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAAT
131 ATAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAAT
* *
10662 ATCATGTATCATGAAGAGGAGAATGTGTTTCTACTGCCTAATCATGAAATGAATGAAGATCCTTA
196 ATCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATCATGAAATGAATGAAGATCCTTA
*
10727 CCAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTACAAAAATAGGTGGGAAGAAA
261 CTAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTACAAAAATAGGTGGGAAGAAA
* * * *
10792 GCGTATCTTGCGAAACCAAAGCTTCAAAATCATGTATCTTTATGAGAAAACTATGTTTACGATGC
326 GCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGTGC
* *
10857 CTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGCTTGTCTTATTTAAGAGACAAACTT
391 CTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGTCTTATTTTAGAGACAAACTT
* * * *
10922 TGATTCTATCAATAATGGTAGAAAGAAAGGCTTCTCTTGTGACCCCAAAGCATTAATGTCTT-TA
456 TGATTCTATCAATAACGGTAGGAAGAAAAGCTTCTCTTGCGACCCCAAAGCATTAATGTCTTGTA
* * *** * * * *
10986 TCATAATGAAAGGAATGTGTTTTTGGTTCCCATTCTTGAAAAGAATGGGGCCTTTTACGAGAATC
521 TCCTAATGAAAGGAATGTGTTTTTGGTTCCCAATCTTTTCAAGATTAGGGACTTTTATGAGAATC
* *
11051 AATGCATGACTCATTTAAAGTATAAACTTTGATTTTAAGGAAAATAAGGCAAAG-AAAGATTTCC
586 AATGCATGTCTCATTTAAAGTACAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCC
11115 ATGC-AAAGAAAACCATCAATATCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATCA
651 ATGCAAAAGAAAACCATCAATATCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATCA
*
11179 TGAAATGAATGAAGATCCTTACTAGAATCCATGTTTGTCTCATTTGACGAATGAACTTATACTTT
716 TGAAATGAATGAAGATCCTTACTAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTT
* *
11244 ACAAAAATAGGTGGGAAGAAAGCGTATCCTGCGAAACCAAAGCTTCAATATCATGTATCTTTATG
781 ACAAAAATAGGTGGGAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCCTTATG
* * *
11309 AGAAAACTATGTTTACGATGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGCTTG
846 AGAAAACTATGTTTATGGTGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTG
11374 TCTTA-TTTAGAGACAAACTTTGATTCTATCAATAACGGTA
911 TCTTATTTTAGAGACAAACTTTGATTCTATCAATAACGGTA
* *
11414 GAAAGAAAGGCTTCTCTTGTGACCCCAAAGCATTACTGTCTTTATCATAATGAAAGGAATGTGTT
1 GAAAGAAAAGCTTCTCTTGTGACCCCAAAGCATTAATGTCTTTATCATAATGAAAGGAATGTGTT
* * * *
11479 TTTGGTTCCCATTCTTGAAAAGAATGGGGCCTTTTACGAGAATCAATGCATGACTCATTTAAAGT
66 TTTGGTTCCCAATCTTGAAAAGAATAGGGACTTTTATGAGAATCAATGCATGACTCATTTAAAGT
11544 ATAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAAT
131 ATAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAAT
11609 ATCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATCATGAAATGAATGAAGATCCTTA
196 ATCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATCATGAAATGAATGAAGATCCTTA
11674 CTAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTACAAAAATAGGTGGGAAGAAA
261 CTAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTACAAAAATAGGTGGGAAG-AA
*
11739 AGCGTATCCTGCGAAACCAAAGCTTCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGTG
325 AGCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGTG
*
11804 CCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGTCTTATTTTATAGACAAACT
390 CCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGTCTTATTTTAGAGACAAACT
11869 TTGATTCTATCAATAACGGTAGGAAGAAAAGCTTCTCTTGCGACCCCAAAGCATTAATGTCTTGT
455 TTGATTCTATCAATAACGGTAGGAAGAAAAGCTTCTCTTGCGACCCCAAAGCATTAATGTCTTGT
* *
11934 ATCCCAATGAAAGGAATGTGTTTTTGGTTTCCAATCTTTTCAAGATTAGGGACTTTTATGAGAAT
520 ATCCTAATGAAAGGAATGTGTTTTTGGTTCCCAATCTTTTCAAGATTAGGGACTTTTATGAGAAT
*
11999 CAATGCATGTCCCATTTAAAGTACAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTC
585 CAATGCATGTCTCATTTAAAGTACAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTC
*
12064 CATACAAAAGAAAACCATCAATATCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATC
650 CATGCAAAAGAAAACCATCAATATCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATC
12129 ATGAAATGAATGAAGATCCTTACTAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTT
715 ATGAAATGAATGAAGATCCTTACTAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTT
* *
12194 TACAAAAATAGGTGGGAAGAAAGCGTATCTTGCGAAACCAAATCTTCAATATCTTGTATCCTTAT
780 TACAAAAATAGGTGGGAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCCTTAT
*
12259 GAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTT
845 GAGAAAACTATGTTTATGGTGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTT
*
12324 GTCTTATTTTATAGACAAACTTTGATTCTATCAATAACGGTA
910 GTCTTATTTTAGAGACAAACTTTGATTCTATCAATAACGGTA
* * **
12366 GGAAGAAAAGCTTCTCTTGCGACCCCAAAGCATTAATGTCTTGTATCCCAATGAAAGGAATGTGT
1 GAAAGAAAAGCTTCTCTTGTGACCCCAAAGCATTAATGTCTT-TATCATAATGAAAGGAATGTGT
* *** * * *
12431 TTTTGGTTTCCAATCTTTTCAAGATTAGGGACTTTTATGAGAATCAATGCATGTCCCATTT-AAG
65 TTTTGGTTCCCAATCTTGAAAAGAATAGGGACTTTTATGAGAATCAATGCATGACTCATTTAAAG
* ** * * *
12495 TAAAAACTAAGA-TTTAAGAAAAATAAGGCAAAGAAAAGATTTCCATAC-AAAGAAAACCATAAA
130 TATAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAA
* * * * **
12558 TATCATTTATCCTAATGAGAAGAATGTGTTTATGGTGCCTAAT-ATGAAATGAATGAAGATCCTT
195 TATCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATCATGAAATGAATGAAGATCCTT
12622 ACTAGAATCCATGTTTGTCTCA-TTGAGGAATGAACTTATACTTTAC-AAAATA-GTGGGAAGAA
260 ACTAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTACAAAAATAGGTGGGAAGAA
* ***
12684 AGCGTATCTTGCGAAACCAAAGCTTCAA-ATCATGTATCTTTATGAGAAAACTATGTTTACAATG
325 AGCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGT-
* *
12748 GCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGCTTGTC-TATTTAAGAGAC-AAC
389 GCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGTCTTATTTTAGAGACAAAC
* * *
12811 TTTGATTCTATC-ATAACGGTAGAAAGCAAGGCTTCTCT
454 TTTGATTCTATCAATAACGGTAGGAAGAAAAGCTTCTCT
Statistics
Matches: 7665, Mismatches: 404, Indels: 52
0.94 0.05 0.01
Matches are distributed among these distances:
942 23 0.00
943 15 0.00
944 41 0.01
945 76 0.01
946 8 0.00
947 351 0.05
948 463 0.06
949 296 0.04
950 1561 0.20
951 2026 0.26
952 2020 0.26
953 643 0.08
954 141 0.02
955 1 0.00
ACGTcount: A:0.36, C:0.15, G:0.18, T:0.31
Consensus pattern (951 bp):
GAAAGAAAAGCTTCTCTTGTGACCCCAAAGCATTAATGTCTTTATCATAATGAAAGGAATGTGTT
TTTGGTTCCCAATCTTGAAAAGAATAGGGACTTTTATGAGAATCAATGCATGACTCATTTAAAGT
ATAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAACCATCAAT
ATCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATCATGAAATGAATGAAGATCCTTA
CTAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTTACAAAAATAGGTGGGAAGAAA
GCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGTGC
CTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTGTCTTATTTTAGAGACAAACTT
TGATTCTATCAATAACGGTAGGAAGAAAAGCTTCTCTTGCGACCCCAAAGCATTAATGTCTTGTA
TCCTAATGAAAGGAATGTGTTTTTGGTTCCCAATCTTTTCAAGATTAGGGACTTTTATGAGAATC
AATGCATGTCTCATTTAAAGTACAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCC
ATGCAAAAGAAAACCATCAATATCATGTATCATGATGAGGAGAATGTGTTTATACTGCCTAATCA
TGAAATGAATGAAGATCCTTACTAGAATCCATGTTTGTCTCATTTGAGGAATGAACTTATACTTT
ACAAAAATAGGTGGGAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCCTTATG
AGAAAACTATGTTTATGGTGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTGTTTG
TCTTATTTTAGAGACAAACTTTGATTCTATCAATAACGGTA
Found at i:10475 original size:158 final size:158
Alignment explanation
Indices: 4109--12836 Score: 1240
Period size: 159 Copynumber: 55.1 Consensus size: 158
4099 GAACTTATAC
* * * * *
4109 TTTA-CAAAAATAGGTGGGAAGAAAGCGTATCTTGCGAAACCAAAGCATCAATATCATGTATCCT
1 TTTATCAATAATAGGTAGAAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCAT
* * * * * *
4173 TATGAGAAAACTATGTTTATGGTGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTTG
66 TATGAGAAAACTGTGTTTACGATGCCTAATCCTGAAAAGAATGGGGATTATTATGAGTATTCATG
* * *
4238 TTTGTC-CTATTTTATAGACAAACTTTGA
131 CTTGTCTC-ATTTAAGAGACAAACTTTGA
* * * * * ** * *
4266 TTCTATCAGTAA-CGGTAGGAAGAAAAGCTTCTCTTGCGACCCCAAAGCATT-AATGTCTTGTAT
1 TT-TATCAATAATAGGTAGAAAG-AAAGCGTATCTTGCGAAACCAAAGC-TTCAATATCATGTAT
* * ** * * * * *** * *
4329 CCTAATGA-AAGGAA-TGTGTTTTTGGTTCCCAATCTTTTCAAGATTAGGGACTT-TTATGAG-A
63 CATTATGAGAA--AACTGTGTTTACGATGCCTAATCCTGAAAAGAATGGGGA-TTATTATGAGTA
* *
4390 ATCAATGCATGTCTCATTTAA-AGTACAAACTTTGA
125 TTC-ATGCTTGTCTCATTTAAGAG-ACAAACTTTGA
* * * * * * * * ** * *
4425 TTT-TAAGGAAAACAAGG--CAAAGAAAAG-ATTTCCATGCAAAAGAAAACCATCAATATCATGT
1 TTTATCA--ATAA-TAGGTAGAAAG-AAAGCGTAT-CTTGCGAAACCAAAGCTTCAATATCATGT
* * * * * * * ** **
4486 ATCATGATGAGGAGAA-TGTGTTTA-TACTGCCTAATCATCAAATGAAAGAAGATCCTTACT-AG
61 ATCATTATGA-GAAAACTGTGTTTACGA-TGCCTAATCCTGAAAAGAATGGGGATTATTA-TGAG
* * * **
4548 AATCCATGTTTGTCTCATTTGCG-GA-ATGAACTTAT-A
123 TATTCATGCTTGTCTCATTTAAGAGACA--AACTT-TGA
* * * * *
4584 CTTTA-CAAAAATAGGTGGGAAGAAAGCGTATCTTGCGAAACCAAAGCATCAATATCATGTATCC
1 -TTTATCAATAATAGGTAGAAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCA
* * * * * *
4648 TTATGAGAAAACTATGTTTATGGTGCCTAATCCTG-AAAGAAAGGGGATTAGTATGAGTATTCTT
65 TTATGAGAAAACTGTGTTTACGATGCCTAATCCTGAAAAGAATGGGGATTATTATGAGTATTCAT
* * *
4712 GTTTGTC-CTATTTTATAGACAAACTTTGA
130 GCTTGTCTC-ATTTAAGAGACAAACTTTGA
* * * * * ** * * *
4741 TTCTATCAGTAA-CGGTAGGAAGAAAAGCTTCTCTTGCGACCCCAAAGCATT-AATGTCTTGCAT
1 TT-TATCAATAATAGGTAGAAAG-AAAGCGTATCTTGCGAAACCAAAGC-TTCAATATCATGTAT
* * ** * * * * *** * *
4804 CCTAATGA-AAGGAA-TGTGTTTTTGGTTCCCAATCTTTTCAAGATTAGGGACTT-TTATGAG-A
63 CATTATGAGAA--AACTGTGTTTACGATGCCTAATCCTGAAAAGAATGGGGA-TTATTATGAGTA
* *
4865 ATCAATGCATGTCTCATTTAA-AGTACAAACTTTGA
125 TTC-ATGCTTGTCTCATTTAAGAG-ACAAACTTTGA
* * * * * * * * * ** * * * *
4900 TTT-TAAGGAAAACAAGG--CAAAGAAAAG-ATTTCCATACAAAAGAAAACCATAAATATCATTT
1 TTTATCA--ATAA-TAGGTAGAAAG-AAAGCGTAT-CTTGCGAAACCAAAGCTTCAATATCATGT
* * * * * ** * ** **
4961 ATCCTAATGAGGAGAA-TGTGTTTATGGTGCCTAATTATGAAATGAATGAAGATCCTTACT-AG-
61 ATCATTATGA-GAAAACTGTGTTTACGATGCCTAATCCTGAAAAGAATGGGGATTATTA-TGAGT
* * *
5023 AATCTATGTTTGTCTCATTTGAG-GA-ATGAACTTAT-A
124 ATTC-ATGCTTGTCTCATTTAAGAGACA--AACTT-TGA
* * * * *
5059 CTTTA-CAAAAATAGGTGGGAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAATATCACGTATCT
1 -TTTATCAATAATAGGTAGAAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCA
* * * * * * *
5123 TTATGAGAAAAATATGTTTATGATGCCTAATCCTGAAAAGAAAGGGGATTAGTACGAGTATTCTT
65 TTATGAGAAAACTGTGTTTACGATGCCTAATCCTGAAAAGAATGGGGATTATTATGAGTATTCAT
* *
5188 GCTTGTCTTATTTAAGAGACAAACTTAGA
130 GCTTGTCTCATTTAAGAGACAAACTTTGA
* * * ** * * *
5217 TTCTATCAAT--TACGGTAGAAAGAAAAGCTTCTCTTGTGACCCCAAATCATT-AATGTC-TTTA
1 TT-TATCAATAATA-GGTAGAAAG-AAAGCGTATCTTGCGAAACCAAAGC-TTCAATATCATGTA
* * * * * * * * *
5278 TCATAATGA-AAGGAA-TGTGTTCT-TGGTTCCCATTCTTGAAAAGAATGGGGCCTT-TTACGAG
62 TCATTATGAGAA--AACTGTGTT-TACGATGCCTAATCCTGAAAAGAATGGGG-ATTATTATGAG
* * * *
5339 -AATCAATGCATGACTCATTTCAAG-TACAAACTTTGA
123 TATTC-ATGCTTGTCTCATTT-AAGAGACAAACTTTGA
* * * * * * * ** * *
5375 TTT-TAAGGAAAATAAGG--CAAAGAAAAG-ATTTCCATGCAAAAGAAAACCATCAATATCATGT
1 TTTATCA--ATAAT-AGGTAGAAAG-AAAGCGTAT-CTTGCGAAACCAAAGCTTCAATATCATGT
* * * * * * * * ** **
5436 ATCATGATAAGGAGAA-TGTGTTTA-TACTGCCTAATCATCAAATGAAAGAAGATCCTTACT-AG
61 ATCATTATGA-GAAAACTGTGTTTACGA-TGCCTAATCCTGAAAAGAATGGGGATTATTA-TGAG
* * * * **
5498 AATCCATGTTTGTGTCATTTGCG-GA-ATGAACTTAT-A
123 TATTCATGCTTGTCTCATTTAAGAGACA--AACTT-TGA
* * * * *
5534 TTT-TACAAAAATAGGTGGGAAGAAAGCGTATCTTGCGAAACCAAAGCATCAATATCATGTATCC
1 TTTAT-CAATAATAGGTAGAAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCA
* * * * * *
5598 TTATGAGAAAACTATGTTTATGGTGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTT
65 TTATGAGAAAACTGTGTTTACGATGCCTAATCCTGAAAAGAATGGGGATTATTATGAGTATTCAT
* * * *
5663 GTTTGTCTTATTTTATAGACAAACTTTGA
130 GCTTGTCTCATTTAAGAGACAAACTTTGA
* * * ** * *
5692 TTCTATCAATAA-CGGTAGAAAGAAAGGCTTCTCTTGCGACCCCAAAGCGTT-AATGTCTTGTAT
1 TT-TATCAATAATAGGTAGAAAGAAA-GCGTATCTTGCGAAACCAAAGC-TTCAATATCATGTAT
* * ** * * * * *** * *
5755 CCTAATGA-AAGGAA-TGTGTTTTTGGTTCCCAATCTTTTCAAGATTAGGGACTT-TTATGAG-A
63 CATTATGAGAA--AACTGTGTTTACGATGCCTAATCCTGAAAAGAATGGGGA-TTATTATGAGTA
* *
5816 ATCAATGCATGTCTCATTTAA-AGTACAAACTTTGA
125 TTC-ATGCTTGTCTCATTTAAGAG-ACAAACTTTGA
* * * * * * * * ** * * * *
5851 TTT-TAAGGAAAATAAGG--CAAAGAAAAG-ATTTCCATACAAAAGAAAACCATAAATATCATTT
1 TTTATCA--ATAAT-AGGTAGAAAG-AAAGCGTAT-CTTGCGAAACCAAAGCTTCAATATCATGT
* * * * ** * ** ** *
5912 ATCCTAATGAGAAGAA-TGTGTTTATGGTGCCTAATTATGAAATGAATGAAGATCCTTACT-AGA
61 ATCATTATGAGAA-AACTGTGTTTACGATGCCTAATCCTGAAAAGAATGGGGATTATTA-TGAGT
* * *
5975 ATCCATGTTTGTCTCATTTGAG-GA-ATGAACTTAT-A
124 ATTCATGCTTGTCTCATTTAAGAGACA--AACTT-TGA
* * * * *
6010 CTTTA-CAAAAATAGGTGGGAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAAAATCATGTATCT
1 -TTTATCAATAATAGGTAGAAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCA
* * * * *
6074 TTATGAGAAAACTATGTTTAAGATGCCTAATCCTG-AAAGAAAGGGGATTAGTATGAGTATTCTT
65 TTATGAGAAAACTGTGTTTACGATGCCTAATCCTGAAAAGAATGGGGATTATTATGAGTATTCAT
*
6138 GCTTGTCTTATTTAAGAGACAAACTTTGA
130 GCTTGTCTCATTTAAGAGACAAACTTTGA
* * * * ** * *
6167 TTCTATCAATAA-CGGTAGAAAGAAAGGCTTCTCTTGTGACCCCAAAGCATT-AATGTC-TTTAT
1 TT-TATCAATAATAGGTAGAAAGAAA-GCGTATCTTGCGAAACCAAAGC-TTCAATATCATGTAT
* * * * * * * * *
6229 CATAATGA-AAGGAA-TGTGTTCT-TGGTTCCCATTCTTGAAAAGAATGGGGCCTT-TTACGAG-
63 CATTATGAGAA--AACTGTGTT-TACGATGCCTAATCCTGAAAAGAATGGGG-ATTATTATGAGT
* * * *
6289 AATCAATGCATGACTCATTTCAAG-TACAAACTTTGA
124 ATTC-ATGCTTGTCTCATTT-AAGAGACAAACTTTGA
* * * * * * * ** * *
6325 TTT-TAAGGAAAATAAGG--CAAAGAAAAG-ATTTCCATGCAAAAGAAAACCATCAATATCATGT
1 TTTATCA--ATAAT-AGGTAGAAAG-AAAGCGTAT-CTTGCGAAACCAAAGCTTCAATATCATGT
* * * * * * * ** **
6386 ATCATGATGAGGAGAA-TGTGTTTA-TACTGCCTAATCATCAAATGAAAGAAGATCCTTACT-AG
61 ATCATTATGA-GAAAACTGTGTTTACGA-TGCCTAATCCTGAAAAGAATGGGGATTATTA-TGAG
* * * * **
6448 AATCCATGTTTGTGTCATTTGCG-GA-ATGAACTTAT-A
123 TATTCATGCTTGTCTCATTTAAGAGACA--AACTT-TGA
* * * * *
6484 TTT-TACAAAAATAGGTGGGAAGAAAGCGTATCTTGCGAAACCAAAGCATCAATATCATGTATCC
1 TTTAT-CAATAATAGGTAGAAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCA
* * * * * *
6548 TTATGAGAAAACTATGTTTATGGTGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTT
65 TTATGAGAAAACTGTGTTTACGATGCCTAATCCTGAAAAGAATGGGGATTATTATGAGTATTCAT
* * *
6613 G-TTAGTCTTATTTTATAGACAAACTTTGA
130 GCTT-GTCTCATTTAAGAGACAAACTTTGA
* * * * ** * *
6642 TTCTATCAATAA-CGGTAGGAAGAAAAGCTTCTCTTGCGACCCCAAAGCATT-AATGTCTTGTAT
1 TT-TATCAATAATAGGTAGAAAG-AAAGCGTATCTTGCGAAACCAAAGC-TTCAATATCATGTAT
*** ** * * * *** * *
6705 CCCAATGA-AAGGAA-TGTGTTTTTGGTTTCC-AATCTTTTCAAGATTAGGGACTT-TTATGAG-
63 CATTATGAGAA--AACTGTG-TTTACGATGCCTAATCCTGAAAAGAATGGGGA-TTATTATGAGT
* * * *
6765 AATCAATGCATGTCCCATTTAA-AGTATAAACTTTGA
124 ATTC-ATGCTTGTCTCATTTAAGAG-ACAAACTTTGA
* * * * * * * ** * *
6801 TTT-TAAGGAAAATAAGG--CAAAGAAAAG-ATTTCCATGCAAAAGAAAACCATCAATATCATGT
1 TTTATCA--ATAAT-AGGTAGAAAG-AAAGCGTAT-CTTGCGAAACCAAAGCTTCAATATCATGT
* * * ** ** **
6862 ATCATGATGAGGAGAA-TGTGTTTATAC-A-GCCTAATCAC-GAAATGAATGAAGATCCTTACCA
61 ATCATTATGA-GAAAACTGTG-TT-TACGATGCCTAATC-CTGAAAAGAATGGGGATTATTATGA
* * ** *
6923 GAATCCATATTTGTCTCATTTGAG-GA-ATGAACTTAT-A
122 GTATTCATGCTTGTCTCATTTAAGAGACA--AACTT-TGA
* * * * * *
6960 CTTTA-CAAAAAACAGGTGGGAAGAAAGCGTATCTTACGAAACCAAAGCGTCAATATCATGTATC
1 -TTTATC-AATAATAGGTAGAAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATC
* * * * * * *
7024 CTTATGAGAAAACTATGTTTATGGTGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCT
64 ATTATGAGAAAACTGTGTTTACGATGCCTAATCCTGAAAAGAATGGGGATTATTATGAGTATTCA
* * * *
7089 TGTTTGTCTTATTTTATAGACAAACTTTGA
129 TGCTTGTCTCATTTAAGAGACAAACTTTGA
* * * * ** * *
7119 TTCTATCAATAA-CGGTAGGAAGAAAAGCTTCTCTTGCGACCCCAAAGCATT-AATGTCTTGTAT
1 TT-TATCAATAATAGGTAGAAAG-AAAGCGTATCTTGCGAAACCAAAGC-TTCAATATCATGTAT
* * ** * * * * *** * *
7182 CCTAATGA-AAGGAA-TGTGTTTTTGGTTCCCAATCTTTTCAAGATTAGGGACTT-TTATGAG-A
63 CATTATGAGAA--AACTGTGTTTACGATGCCTAATCCTGAAAAGAATGGGGA-TTATTATGAGTA
* *
7243 ATCAATGCATGTCTCATTTAA-AGTACAAACTTTGA
125 TTC-ATGCTTGTCTCATTTAAGAG-ACAAACTTTGA
** * * * * * * ** * * * *
7278 TTTAAGGAA-AATAAGG--CAAAGAAAAG-ATTTCCATACAAAAGAAAACCATAAATATCATTTA
1 TTT-ATCAATAAT-AGGTAGAAAG-AAAGCGTAT-CTTGCGAAACCAAAGCTTCAATATCATGTA
* * * * ** * ** ** *
7339 TCCTAATGAGAAGAA-TGTGTTTATGGTGCCTAATTATGAAATGAATGAAGATCCTTACT-AGAA
62 TCATTATGAGAA-AACTGTGTTTACGATGCCTAATCCTGAAAAGAATGGGGATTATTA-TGAGTA
* * *
7402 TCCATGTTTGTCTCATTTGAG-GA-ATGAACTTAT-A
125 TTCATGCTTGTCTCATTTAAGAGACA--AACTT-TGA
* * * * *
7436 CTTTA-CAAAAATAGGTGGGAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAAAATCATGTATCT
1 -TTTATCAATAATAGGTAGAAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCA
* * * * *
7500 TTATGAGAAAACTATGTTTAAGATGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTT
65 TTATGAGAAAACTGTGTTTACGATGCCTAATCCTGAAAAGAATGGGGATTATTATGAGTATTCAT
*
7565 GCTTGTCTTATTTAAGAGACAAACTTTGA
130 GCTTGTCTCATTTAAGAGACAAACTTTGA
* * * * ** * *
7594 TTCTATCAATAA-CGGTAGAAAGAAAGGCTTCTCTTGTGACCCCAAAGCATT-AATGTC-TTTAT
1 TT-TATCAATAATAGGTAGAAAGAAA-GCGTATCTTGCGAAACCAAAGC-TTCAATATCATGTAT
* ** * * * * * *
7656 CATAATGA-AAGGAA-TGTGTTTTTGGTTCCCATTCTTGAAAAGAATGGGGCCTT-TTATGAG-A
63 CATTATGAGAA--AACTGTGTTTACGATGCCTAATCCTGAAAAGAATGGGG-ATTATTATGAGTA
* * * *
7717 ATCAATGCATGACTCATTTAA-AGTATAAACTTTGA
125 TTC-ATGCTTGTCTCATTTAAGAG-ACAAACTTTGA
* * * * * * * ** * *
7752 TTT-TAAGGAAAATAAGG--CAAAGAAAAG-ATTTCCATGCAAAAGAAAACCATCAATATCATGT
1 TTTATCA--ATAAT-AGGTAGAAAG-AAAGCGTAT-CTTGCGAAACCAAAGCTTCAATATCATGT
* * * * ** ** **
7813 ATCATGATGAGGAGAA-TGTGTTTA-TATAGCCTAATCAC-GAAATGAATGAAGATCCTTACCAG
61 ATCATTATGA-GAAAACTGTGTTTACGAT-GCCTAATC-CTGAAAAGAATGGGGATTATTATGAG
* * * * *
7875 AATCCATGTTTCTCTCATTTGAG-GA-ATGAACTTAT-A
123 TATTCATGCTTGTCTCATTTAAGAGACA--AACTT-TGA
* * * * * *
7911 CTTTA-CAAAAACAGGTGGGAAGAAAGCGTATCTTGCGAAACCAAAGCGTCAATATCATGTATCC
1 -TTTATCAATAATAGGTAGAAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCA
* * * * * * *
7975 TTATGAGAAAACTATGTTTATGGTGCCTAATCCTGAAAAGAAAGGTGATTAGTATGAGTATTCTT
65 TTATGAGAAAACTGTGTTTACGATGCCTAATCCTGAAAAGAATGGGGATTATTATGAGTATTCAT
* * * *
8040 GTTTGTCTTATTTTATAGACAAACTTTGA
130 GCTTGTCTCATTTAAGAGACAAACTTTGA
* * * * * ** * *
8069 TTCTATCAATAA-CGATAGGAAGAAAGCTTCTCTTGCGACCCCAAAGCATT-AATGTCTTGTATC
1 TT-TATCAATAATAGGTAGAAAGAAAGCGTATCTTGCGAAACCAAAGC-TTCAATATCATGTATC
* ** * * * * *** * *
8132 -CTACTGA-AAGGAA-TGTGTTTTTGGTTCCCAATCTTTTCAAGATTGAGGACTT-TTATGAG-A
64 ATTA-TGAGAA--AACTGTGTTTACGATGCCTAATCCTGAAAAGAATGGGGA-TTATTATGAGTA
* *
8192 ATCAATGCATGTCTCATTTAA-AGTACAAACTTTGA
125 TTC-ATGCTTGTCTCATTTAAGAG-ACAAACTTTGA
** * * * * * * * ** * * * *
8227 TTTTAAGGAAAAATAAGG--CAAAGAAAAG-ATTTCCATACAAAAGAAAACCATAAATATCATTT
1 -TTT-ATCAATAAT-AGGTAGAAAG-AAAGCGTAT-CTTGCGAAACCAAAGCTTCAATATCATGT
* * * * ** * ** **
8289 ATCCTAATGAGAAGAA-TGTGTTTTATGGTGCCTAATTATGAAATGAATGAAGATCCTTACT-AG
61 ATCATTATGAGAA-AACTGTG-TTTACGATGCCTAATCCTGAAAAGAATGGGGATTATTA-TGAG
* * * *
8352 AATCCATGTTTGTCTCATTTGAG-GA-ATGAACTTAT-A
123 TATTCATGCTTGTCTCATTTAAGAGACA--AACTT-TGA
* * * * *
8388 CTTTA-CAAAAATAGGTGGGAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAATATCACGTATCT
1 -TTTATCAATAATAGGTAGAAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCA
* * * * *
8452 TTATGAGAAAACTATGTTTAAGATGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTT
65 TTATGAGAAAACTGTGTTTACGATGCCTAATCCTGAAAAGAATGGGGATTATTATGAGTATTCAT
* *
8517 GCTTGTCTTATTTAAGAGACAAACTTAGA
130 GCTTGTCTCATTTAAGAGACAAACTTTGA
* * * * * ** * *
8546 TTCTATCAATAA-CGGTTGAAAGAAAAGCTTCTCTTGTGACCCCAAAGCATT-AATGTC-TTTAT
1 TT-TATCAATAATAGGTAGAAAG-AAAGCGTATCTTGCGAAACCAAAGC-TTCAATATCATGTAT
* * * * * * * * *
8608 CATAATGA-AAGGAA-TGTGTTCT-TGGTTCCCATTCTTGAAAAGAATGGGGCCTT-TTACGAG-
63 CATTATGAGAA--AACTGTGTT-TACGATGCCTAATCCTGAAAAGAATGGGG-ATTATTATGAGT
* * * *
8668 AATCAATGCATGACTCATTTCAAG-TACAAACTTTGA
124 ATTC-ATGCTTGTCTCATTT-AAGAGACAAACTTTGA
* * * * * * * ** * *
8704 TTT-TAAGGAAAATAAGG--CAAAGAAAAG-ATTTCCATGCAAAAGAAAACCATCAATATCATGT
1 TTTATCA--ATAAT-AGGTAGAAAG-AAAGCGTAT-CTTGCGAAACCAAAGCTTCAATATCATGT
* * * * * * * * ** **
8765 ATCATGATGAGGAGAA-TGTGTTTA-TACTACCTAATCATCAAATGAAAGAAGATCCTTACT-AG
61 ATCATTATGA-GAAAACTGTGTTTACGA-TGCCTAATCCTGAAAAGAATGGGGATTATTA-TGAG
* * * **
8827 AATCCATGTTTGTCTCATTTGCG-GA-ATGAACTTAT-A
123 TATTCATGCTTGTCTCATTTAAGAGACA--AACTT-TGA
* * * *
8863 CTTTA-CAAAAAATAGGTGGGAAGAAAGCGTATCTTGCGAAACCAAAGCATCAATATCATGTATC
1 -TTTATC-AATAATAGGTAGAAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATC
* * * * * * *
8927 CTTATGAGAAAACTATGTTTATGGTGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCT
64 ATTATGAGAAAACTGTGTTTACGATGCCTAATCCTGAAAAGAATGGGGATTATTATGAGTATTCA
* * *
8992 TGTTTGTC-CTATTTTATAGACAAACTTTGA
129 TGCTTGTCTC-ATTTAAGAGACAAACTTTGA
* * * * * ** * *
9022 TTCTATCAGTAA-CGGTAGGAAGAAAAGCTTCTCTTGCGACCCCAAAGCATT-AATGTCTTGTAT
1 TT-TATCAATAATAGGTAGAAAG-AAAGCGTATCTTGCGAAACCAAAGC-TTCAATATCATGTAT
* * ** * * * * *** * *
9085 CCTAATGA-AAGGAA-TGTGTTTTTGGTTCCCAATCTTTTCAAGATTAGGGACTT-TTATGAG-A
63 CATTATGAGAA--AACTGTGTTTACGATGCCTAATCCTGAAAAGAATGGGGA-TTATTATGAGTA
* *
9146 ATCAATGCATGTCTCATTTAA-AGTACAAACTTTGA
125 TTC-ATGCTTGTCTCATTTAAGAG-ACAAACTTTGA
* * * * * * * * * ** * * * *
9181 TTT-TAAGGAAAACAAGG--CAAAGAAAAG-ATTTCCATACAAAAGAAAACCATAAATATCATTT
1 TTTATCA--ATAA-TAGGTAGAAAG-AAAGCGTAT-CTTGCGAAACCAAAGCTTCAATATCATGT
* * * * ** * ** ** *
9242 ATCCTAATGAGAAGAA-TGTGTTTATGGTGCCTAATTATGAAATGAATGAAGATCCTTACT-AGA
61 ATCATTATGAGAA-AACTGTGTTTACGATGCCTAATCCTGAAAAGAATGGGGATTATTA-TGAGT
* * *
9305 ATCCATGTTTGTCTCATTTGAG-GA-ATGAACTTAT-A
124 ATTCATGCTTGTCTCATTTAAGAGACA--AACTT-TGA
* * * * *
9340 CTTTA-CAAAAATAGGTGGGAAGAAAGCGTATCTTGTGAAACCAAAGCTTCAATATCATGTATCC
1 -TTTATCAATAATAGGTAGAAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCA
* * * * * *
9404 TTATGAGAAAACTATGTTTATGGTGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTT
65 TTATGAGAAAACTGTGTTTACGATGCCTAATCCTGAAAAGAATGGGGATTATTATGAGTATTCAT
* * * *
9469 GTTTGTCTTATTTTAGAGACAAAGTTTGA
130 GCTTGTCTCATTTAAGAGACAAACTTTGA
* * * * * ** * * *
9498 TTCTATCAATAA-CGGTAGGAAGAAAAGCTTCTCTTGTGACCCCAAAG-TATTAATGTCTTGTAT
1 TT-TATCAATAATAGGTAGAAAG-AAAGCGTATCTTGCGAAACCAAAGCT-TCAATATCATGTAT
* * * * * * * * *
9561 CCTAATGA-AAGGAA-TGTGTTTTTCG-TTCCCAATCTTGGAAAGATTAGGGACTT-TTATGAG-
63 CATTATGAGAA--AACTGTG-TTTACGATGCCTAATCCTGAAAAGAATGGGGA-TTATTATGAGT
* *
9621 AATCAATGCATGTCTCATTTAA-AGTACAAACTTTGA
124 ATTC-ATGCTTGTCTCATTTAAGAG-ACAAACTTTGA
* * * * * * ** * *
9657 TTT-TAAGGAAAATAAGG--CAAAGAAAAG-ATTTCTATGCAAAAGAAAACCATCAATATCATGT
1 TTTATCA--ATAAT-AGGTAGAAAG-AAAGCGTATCT-TGCGAAACCAAAGCTTCAATATCATGT
* * * *** **
9718 ATCATGATGAGGAGAA-TGTGTTCATAC--TGCCTAATCAC-GAAATGAATAAAGATCCTTACT-
61 ATCATTATGA-GAAAACTGTGTT--TACGATGCCTAATC-CTGAAAAGAATGGGGATTATTA-TG
* * * *
9778 AGAATCCATGTTTGTCTCATTTGAG-GA-ATGAACTTAT-A
121 AGTATTCATGCTTGTCTCATTTAAGAGACA--AACTT-TGA
* * * * *
9816 CTTTA-CAAAAATAGGTGGGAAGAAAGCGTATCTTGTGAAACCAAAGCTTCAATATCATGTATCC
1 -TTTATCAATAATAGGTAGAAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCA
* * * * * *
9880 TTATGAGAAAACTATGTTTATGGTGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTT
65 TTATGAGAAAACTGTGTTTACGATGCCTAATCCTGAAAAGAATGGGGATTATTATGAGTATTCAT
* * * *
9945 GTTTGTCTTATTTTAGAGACAAAGTTTGA
130 GCTTGTCTCATTTAAGAGACAAACTTTGA
* * * * * ** * * *
9974 TTTTATCAATAA-CGGTAGGAAGAAAAGCTTCTCTTGTGACCCCAAAG-TATTAATGTCTTGTAT
1 -TTTATCAATAATAGGTAGAAAG-AAAGCGTATCTTGCGAAACCAAAGCT-TCAATATCATGTAT
* * ** * * * * *** * *
10037 CCTAATGA-AAGGAA-TGTGTTTTTGGTTCCCAATCTTTTCAAGATTAGGGACTT-TTATGAG-A
63 CATTATGAGAA--AACTGTGTTTACGATGCCTAATCCTGAAAAGAATGGGGA-TTATTATGAGTA
* *
10098 ATCAATGCATGTCTCATTTAA-AGTACAAACTTTGA
125 TTC-ATGCTTGTCTCATTTAAGAG-ACAAACTTTGA
* * * * * * ** * *
10133 TTT-TAAGGAAAATAAGG--CAAAGAAAAG-ATTTCTATGCAAAAGAAAACCATCAATATCATGT
1 TTTATCA--ATAAT-AGGTAGAAAG-AAAGCGTATCT-TGCGAAACCAAAGCTTCAATATCATGT
* * * * * ** **
10194 ATCATGATGAGGAGAA-TGTGTTTA-TACTGCCTAATCATGAAATGAATGAAGATCCTTACT-AG
61 ATCATTATGA-GAAAACTGTGTTTACGA-TGCCTAATCCTGAAAAGAATGGGGATTATTA-TGAG
* * * * *
10256 AATCCGTGTTTGTCTCATTTGAG-GA-ATGAACTTAT-A
123 TATTCATGCTTGTCTCATTTAAGAGACA--AACTT-TGA
* * * * *
10292 CTTTA-CAAAAATAGGTGGGAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAAAATCATGTATCT
1 -TTTATCAATAATAGGTAGAAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCA
* * * * *
10356 TTATGCGAAAACTATGTTTACGATGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTT
65 TTATGAGAAAACTGTGTTTACGATGCCTAATCCTGAAAAGAATGGGGATTATTATGAGTATTCAT
*
10421 GCTTGTCTTATTTAAGAGACAAACTTTGA
130 GCTTGTCTCATTTAAGAGACAAACTTTGA
* * * ** *
10450 TTCTATCAATAAT-GGTAGAAAGAAAGGCTTCTCTTGTGACCCCAAAGCATT-AATGA-C-TTTA
1 TT-TATCAATAATAGGTAGAAAGAAA-GCGTATCTTGCGAAACCAAAGC-TTCAAT-ATCATGTA
* * ** * * * * * * *
10511 TCA-TA-AAGAAAGGAATGTGTTTTTGGTTCCCATTCTTGAAAAGAATGGGGCCTT-TTACGAG-
62 TCATTATGAGAAA--ACTGTGTTTACGATGCCTAATCCTGAAAAGAATGGGG-ATTATTATGAGT
* * ** * *
10572 AATCAAGGCACGACTCATTTAA-AGTATAAACTTTGA
124 ATTC-ATGCTTGTCTCATTTAAGAG-ACAAACTTTGA
** * * * * * * ** * *
10608 TTTGAAGGAA-AATAAG-ACAAAGAAAAG-ATTTCCATGCAAAAGAAAACCATCAATATCATGTA
1 TTT--ATCAATAATAGGTAGAAAG-AAAGCGTAT-CTTGCGAAACCAAAGCTTCAATATCATGTA
* * * * * * ** ** ** *
10670 TCATGAAGAGGAGAA-TGTGTTT-CTACTGCCTAATCATGAAATGAATGAAGATCCTTACCAGAA
62 TCATTATGA-GAAAACTGTGTTTACGA-TGCCTAATCCTGAAAAGAATGGGGATTATTATGAGTA
* * *
10733 TCCATGTTTGTCTCATTTGAG-GA-ATGAACTTAT-A
125 TTCATGCTTGTCTCATTTAAGAGACA--AACTT-TGA
* * * * *
10767 CTTTA-CAAAAATAGGTGGGAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAAAATCATGTATCT
1 -TTTATCAATAATAGGTAGAAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCA
* * * *
10831 TTATGAGAAAACTATGTTTACGATGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTT
65 TTATGAGAAAACTGTGTTTACGATGCCTAATCCTGAAAAGAATGGGGATTATTATGAGTATTCAT
*
10896 GCTTGTCTTATTTAAGAGACAAACTTTGA
130 GCTTGTCTCATTTAAGAGACAAACTTTGA
* * * ** * *
10925 TTCTATCAATAAT-GGTAGAAAGAAAGGCTTCTCTTGTGACCCCAAAGCATT-AATGTC-TTTAT
1 TT-TATCAATAATAGGTAGAAAGAAA-GCGTATCTTGCGAAACCAAAGC-TTCAATATCATGTAT
* ** * * * * * * *
10987 CATAATGA-AAGGAA-TGTGTTTTTGGTTCCCATTCTTGAAAAGAATGGGGCCTT-TTACGAG-A
63 CATTATGAGAA--AACTGTGTTTACGATGCCTAATCCTGAAAAGAATGGGG-ATTATTATGAGTA
* * * *
11048 ATCAATGCATGACTCATTTAA-AGTATAAACTTTGA
125 TTC-ATGCTTGTCTCATTTAAGAG-ACAAACTTTGA
* * * * * * ** * *
11083 TTT-TAAGGAAAATAAGG--CAAAGAAAG-ATTTCCATGC-AAAGAAAACCATCAATATCATGTA
1 TTTATCA--ATAAT-AGGTAGAAAGAAAGCGTAT-CTTGCGAAACCAAAGCTTCAATATCATGTA
* * * * * ** ** *
11143 TCATGATGAGGAGAA-TGTGTTTA-TACTGCCTAATCATGAAATGAATGAAGATCCTTACT-AGA
62 TCATTATGA-GAAAACTGTGTTTACGA-TGCCTAATCCTGAAAAGAATGGGGATTATTA-TGAGT
* * * **
11205 ATCCATGTTTGTCTCATTTGACGA-ATGAACTTAT-A
124 ATTCATGCTTGTCTCATTT-AAGAGACAAACTT-TGA
* * * * *
11240 CTTTA-CAAAAATAGGTGGGAAGAAAGCGTATCCTGCGAAACCAAAGCTTCAATATCATGTATCT
1 -TTTATCAATAATAGGTAGAAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCA
* * * *
11304 TTATGAGAAAACTATGTTTACGATGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTT
65 TTATGAGAAAACTGTGTTTACGATGCCTAATCCTGAAAAGAATGGGGATTATTATGAGTATTCAT
*
11369 GCTTGTCTTATTT-AGAGACAAACTTTGA
130 GCTTGTCTCATTTAAGAGACAAACTTTGA
* * * * ** * * *
11397 TTCTATCAATAA-CGGTAGAAAGAAAGGCTTCTCTTGTGACCCCAAAGCATT-ACTGTC-TTTAT
1 TT-TATCAATAATAGGTAGAAAGAAA-GCGTATCTTGCGAAACCAAAGC-TTCAATATCATGTAT
* ** * * * * * * *
11459 CATAATGA-AAGGAA-TGTGTTTTTGGTTCCCATTCTTGAAAAGAATGGGGCCTT-TTACGAG-A
63 CATTATGAGAA--AACTGTGTTTACGATGCCTAATCCTGAAAAGAATGGGG-ATTATTATGAGTA
* * * *
11520 ATCAATGCATGACTCATTTAA-AGTATAAACTTTGA
125 TTC-ATGCTTGTCTCATTTAAGAG-ACAAACTTTGA
* * * * * * * ** * *
11555 TTT-TAAGGAAAATAAGG--CAAAGAAAAG-ATTTCCATGCAAAAGAAAACCATCAATATCATGT
1 TTTATCA--ATAAT-AGGTAGAAAG-AAAGCGTAT-CTTGCGAAACCAAAGCTTCAATATCATGT
* * * * * ** **
11616 ATCATGATGAGGAGAA-TGTGTTTA-TACTGCCTAATCATGAAATGAATGAAGATCCTTACT-AG
61 ATCATTATGA-GAAAACTGTGTTTACGA-TGCCTAATCCTGAAAAGAATGGGGATTATTA-TGAG
* * * *
11678 AATCCATGTTTGTCTCATTTGAG-GA-ATGAACTTAT-A
123 TATTCATGCTTGTCTCATTTAAGAGACA--AACTT-TGA
* * * *
11714 CTTTA-CAAAAATAGGTGGGAAGAAAAGCGTATCCTGCGAAACCAAAGCTTCAATATCATGTATC
1 -TTTATCAATAATAGGTAGAAAG-AAAGCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATC
* * * * * * *
11778 CTTATGAGAAAACTATGTTTATGGTGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCT
64 ATTATGAGAAAACTGTGTTTACGATGCCTAATCCTGAAAAGAATGGGGATTATTATGAGTATTCA
* * * *
11843 TGTTTGTCTTATTTTATAGACAAACTTTGA
129 TGCTTGTCTCATTTAAGAGACAAACTTTGA
* * * * ** * *
11873 TTCTATCAATAA-CGGTAGGAAGAAAAGCTTCTCTTGCGACCCCAAAGCATT-AATGTCTTGTAT
1 TT-TATCAATAATAGGTAGAAAG-AAAGCGTATCTTGCGAAACCAAAGC-TTCAATATCATGTAT
*** ** * * * *** * *
11936 CCCAATGA-AAGGAA-TGTGTTTTTGGTTTCC-AATCTTTTCAAGATTAGGGACTT-TTATGAG-
63 CATTATGAGAA--AACTGTG-TTTACGATGCCTAATCCTGAAAAGAATGGGGA-TTATTATGAGT
* * *
11996 AATCAATGCATGTCCCATTTAA-AGTACAAACTTTGA
124 ATTC-ATGCTTGTCTCATTTAAGAG-ACAAACTTTGA
* * * * * * * * ** * *
12032 TTT-TAAGGAAAATAAGG--CAAAGAAAAG-ATTTCCATACAAAAGAAAACCATCAATATCATGT
1 TTTATCA--ATAAT-AGGTAGAAAG-AAAGCGTAT-CTTGCGAAACCAAAGCTTCAATATCATGT
* * * * * ** **
12093 ATCATGATGAGGAGAA-TGTGTTTA-TACTGCCTAATCATGAAATGAATGAAGATCCTTACT-AG
61 ATCATTATGA-GAAAACTGTGTTTACGA-TGCCTAATCCTGAAAAGAATGGGGATTATTA-TGAG
* * * *
12155 AATCCATGTTTGTCTCATTTGAG-GA-ATGAACTTAT-A
123 TATTCATGCTTGTCTCATTTAAGAGACA--AACTT-TGA
* * * * * *
12191 CTTTA-CAAAAATAGGTGGGAAGAAAGCGTATCTTGCGAAACCAAATCTTCAATATCTTGTATCC
1 -TTTATCAATAATAGGTAGAAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCA
* * * * * * *
12255 TTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCTT
65 TTATGAGAAAACTGTGTTTACGATGCCTAATCCTGAAAAGAATGGGGATTATTATGAGTATTCAT
* * * *
12320 GTTTGTCTTATTTTATAGACAAACTTTGA
130 GCTTGTCTCATTTAAGAGACAAACTTTGA
* * * * ** * *
12349 TTCTATCAATAA-CGGTAGGAAGAAAAGCTTCTCTTGCGACCCCAAAGCATT-AATGTCTTGTAT
1 TT-TATCAATAATAGGTAGAAAG-AAAGCGTATCTTGCGAAACCAAAGC-TTCAATATCATGTAT
*** ** * * * *** * *
12412 CCCAATGA-AAGGAA-TGTGTTTTTGGTTTCC-AATCTTTTCAAGATTAGGGACTT-TTATGAG-
63 CATTATGAGAA--AACTGTG-TTTACGATGCCTAATCCTGAAAAGAATGGGGA-TTATTATGAGT
* * * **
12472 AATCAATGCATGTCCCATTTAAGTA-A-AAACTAAGA
124 ATTC-ATGCTTGTCTCATTTAAG-AGACAAACTTTGA
** * * * * * * ** * * * *
12507 TTTAAGAAAAATAAGG--CAAAGAAAAG-ATTTCCATAC-AAAGAAAACCATAAATATCATTTAT
1 TTTATCAATAAT-AGGTAGAAAG-AAAGCGTAT-CTTGCGAAACCAAAGCTTCAATATCATGTAT
* * * * * * ** ** *
12568 CCTAATGAGAAGAA-TGTGTTTATGGTGCCTAAT-ATGAAATGAATGAAGATCCTTACT-AGAAT
63 CATTATGAGAA-AACTGTGTTTACGATGCCTAATCCTGAAAAGAATGGGGATTATTA-TGAGTAT
* * * * **
12630 CCATGTTTGTCTCATTGAGGA-ATGAACTTAT-A
126 TCATGCTTGTCTCATTTAAGAGACAAACTT-TGA
* * *
12662 CTTTA-CAA-AATA-GTGGGAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAA-ATCATGTATCT
1 -TTTATCAATAATAGGTAGAAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCA
* * * * *
12723 TTATGAGAAAACTATGTTTACAATGGCCTAATCCTGAAAAGAAAGGGGATTAGTATGAGTATTCT
65 TTATGAGAAAACTGTGTTTACGAT-GCCTAATCCTGAAAAGAATGGGGATTATTATGAGTATTCA
12788 TGCTTGTCT-ATTTAAGAGAC-AACTTTGA
129 TGCTTGTCTCATTTAAGAGACAAACTTTGA
*
12816 TTCTATC-ATAA-CGGTAGAAAG
1 TT-TATCAATAATAGGTAGAAAG
12837 CAAGGCTTCT
Statistics
Matches: 6016, Mismatches: 1888, Indels: 1336
0.65 0.20 0.14
Matches are distributed among these distances:
152 3 0.00
153 36 0.01
154 44 0.01
155 81 0.01
156 98 0.02
157 521 0.09
158 2323 0.39
159 2529 0.42
160 286 0.05
161 88 0.01
162 7 0.00
ACGTcount: A:0.36, C:0.15, G:0.18, T:0.31
Consensus pattern (158 bp):
TTTATCAATAATAGGTAGAAAGAAAGCGTATCTTGCGAAACCAAAGCTTCAATATCATGTATCAT
TATGAGAAAACTGTGTTTACGATGCCTAATCCTGAAAAGAATGGGGATTATTATGAGTATTCATG
CTTGTCTCATTTAAGAGACAAACTTTGA
Found at i:11207 original size:157 final size:155
Alignment explanation
Indices: 10095--12158 Score: 425
Period size: 158 Copynumber: 13.0 Consensus size: 155
10085 GACTTTTATG
* *
10095 AGAATCAATGCATGTCTCATTTAAAGTACAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAG
1 AGAATCAATGCATGACTCATTTAAAGTATAAACTTTGATTTTAA--AAAATAAGGCAAAG-AAAG
* *
10160 ATTTCTATGCAAAAGAAAACCATCAATATCATGTATCATGATGAGGAGAATGTGTTTATACTGCC
63 ATTTCCATGCAAAACAAAACCATCAATATCATGTATCATGATGA-GAGAATGTGTTTATACTGCC
*
10225 TAATCATGAAATGAATGAAGATCCTTACT
127 TAATCATGAAAAGAATGAAGATCCTTACT
** ** * * * * * * * **
10254 AGAATCCGTGTTTGTCTCATTTGAGGAATGAACTTAT-ACTTTACAAAAATAGGTGGGAAGAAAG
1 AGAATCAATGCATGACTCATTTAAAGTATAAACTT-TGATTTTA-AAAAATAAG-GCAAAGAAAG
* * * * * * * * * * * * * *
10318 CGTAT-CTTGCGAAACCAAAGCTTCAAAATCATGTATCTTTATGCGAAAACTATGTTTACGA-TG
63 -ATTTCCATGCAAAACAAAACCATCAATATCATGTATCATGATGAGAGAA-TGTGTTTA-TACTG
* * ** ***
10381 CCTAATCCTGAAAAGAAAGGGGATTAGTA-T
125 CCTAATCATGAAAAGAATGAAGATCCTTACT
* * * * * * * ** *
10411 GAGTATTC-TTGCTTGTCTTATTTAAGAG-ACAAACTTTGATTCT-ATCAATAATGGTAGAAAGA
1 -AG-AATCAATGCATGACTCATTTAA-AGTATAAACTTTGATTTTAAAAAATAA-GG--CAAAGA
** * ** ** * * * * * * * * *
10473 AAGGCTTCTCTTGTGACCCCAAAGCATTAATGA-C-TTTATCATAAAGAAAGGAATGTGTTTTTG
60 AAGATTTC-CATGCAAAACAAAACCATCAAT-ATCATGTATCATGATGAGA-GAATGTGTTTATA
* * * * * ** *
10536 GTTCCCATTCTTGAAAAGAATG--GGGCCTTTTACG
122 CTGCCTAATCATGAAAAGAATGAAGATCC--TTACT
* * * *
10570 AGAATCAAGGCACGACTCATTTAAAGTATAAACTTTGATTTGAAGGAAAATAAGACAAAGAAAAG
1 AGAATCAATGCATGACTCATTTAAAGTATAAACTTTGATTTTAA--AAAATAAGGCAAAG-AAAG
* * *
10635 ATTTCCATGCAAAAGAAAACCATCAATATCATGTATCATGAAGAGGAGAATGTGTTTCTACTGCC
63 ATTTCCATGCAAAACAAAACCATCAATATCATGTATCATGATGA-GAGAATGTGTTTATACTGCC
* *
10700 TAATCATGAAATGAATGAAGATCCTTACC
127 TAATCATGAAAAGAATGAAGATCCTTACT
* ** * * * * * * * **
10729 AGAATCCATGTTTGTCTCATTTGAGGAATGAACTTAT-ACTTTACAAAAATAGGTGGGAAGAAAG
1 AGAATCAATGCATGACTCATTTAAAGTATAAACTT-TGATTTTA-AAAAATAAG-GCAAAGAAAG
* * * * * * * * * * * * *
10793 CGTAT-CTTGCGAAACCAAAGCTTCAAAATCATGTATCTTTATGAGAAAACTATGTTTACGA-TG
63 -ATTTCCATGCAAAACAAAACCATCAATATCATGTATCATGATGAGAGAA-TGTGTTTA-TACTG
* * ** ***
10856 CCTAATCCTGAAAAGAAAGGGGATTAGTA-T
125 CCTAATCATGAAAAGAATGAAGATCCTTACT
* * * * * * * ** *
10886 GAGTATTC-TTGCTTGTCTTATTTAAGAG-ACAAACTTTGATTCT-ATCAATAATGGTAGAAAGA
1 -AG-AATCAATGCATGACTCATTTAA-AGTATAAACTTTGATTTTAAAAAATAA-GG--CAAAGA
** * ** ** * * * * * * * * **
10948 AAGGCTTCTCTTGTGACCCCAAAGCATTAATGTC-TTTATCATAATGAAAGGAATGTGTTTTTGG
60 AAGATTTC-CATGCAAAACAAAACCATCAATATCATGTATCATGATGAGA-GAATGTGTTTATAC
* * * * ** *
11012 TTCCCATTCTTGAAAAGAATG--GGGCCTTTTACG
123 TGCCTAATCATGAAAAGAATGAAGATCC--TTACT
11045 AGAATCAATGCATGACTCATTTAAAGTATAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAGA
1 AGAATCAATGCATGACTCATTTAAAGTATAAACTTTGATTTTAA--AAAATAAGGCAAAGAAAGA
*
11110 TTTCCATGC-AAAGAAAACCATCAATATCATGTATCATGATGAGGAGAATGTGTTTATACTGCCT
64 TTTCCATGCAAAACAAAACCATCAATATCATGTATCATGATGA-GAGAATGTGTTTATACTGCCT
*
11174 AATCATGAAATGAATGAAGATCCTTACT
128 AATCATGAAAAGAATGAAGATCCTTACT
* ** * * * * * * * **
11202 AGAATCCATGTTTGTCTCATTTGACGAATGAACTTAT-ACTTTACAAAAATAGGTGGGAAGAAAG
1 AGAATCAATGCATGACTCATTTAAAGTATAAACTT-TGATTTTA-AAAAATAAG-GCAAAGAAAG
* * * * * * * * * * *
11266 CGTATCC-TGCGAAACCAAAGCTTCAATATCATGTATCTTTATGAGAAAACTATGTTTACGA-TG
63 -ATTTCCATGCAAAACAAAACCATCAATATCATGTATCATGATGAGAGAA-TGTGTTTA-TACTG
* * ** ***
11329 CCTAATCCTGAAAAGAAAGGGGATTAGTA-T
125 CCTAATCATGAAAAGAATGAAGATCCTTACT
* * * * * * * * ** *
11359 GAGTATTC-TTGCTTGTCTTATTTAGAG-ACAAACTTTGATTCT-ATCAATAACGGTAGAAAGAA
1 -AG-AATCAATGCATGACTCATTTAAAGTATAAACTTTGATTTTAAAAAATAA-GG--CAAAGAA
** * ** ** * * * * * * * * * **
11421 AGGCTTCTCTTGTGACCCCAAAGCATTACTGTC-TTTATCATAATGAAAGGAATGTGTTTTTGGT
61 AGATTTC-CATGCAAAACAAAACCATCAATATCATGTATCATGATGAGA-GAATGTGTTTATACT
* * * * ** *
11485 TCCCATTCTTGAAAAGAATG--GGGCCTTTTACG
124 GCCTAATCATGAAAAGAATGAAGATCC--TTACT
11517 AGAATCAATGCATGACTCATTTAAAGTATAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAAG
1 AGAATCAATGCATGACTCATTTAAAGTATAAACTTTGATTTTAA--AAAATAAGGCAAAG-AAAG
*
11582 ATTTCCATGCAAAAGAAAACCATCAATATCATGTATCATGATGAGGAGAATGTGTTTATACTGCC
63 ATTTCCATGCAAAACAAAACCATCAATATCATGTATCATGATGA-GAGAATGTGTTTATACTGCC
*
11647 TAATCATGAAATGAATGAAGATCCTTACT
127 TAATCATGAAAAGAATGAAGATCCTTACT
* ** * * * * * * * **
11676 AGAATCCATGTTTGTCTCATTTGAGGAATGAACTTAT-ACTTTACAAAAATAGGTGGGAAGAAAA
1 AGAATCAATGCATGACTCATTTAAAGTATAAACTT-TGATTTTA-AAAAATAAG-GCAAAG-AAA
* * * * * * * * * * **
11740 GCGTATCC-TGCGAAACCAAAGCTTCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGTG
62 G-ATTTCCATGCAAAACAAAACCATCAATATCATGTATCATGATGAGAGAA-TGTGTTTATACTG
* * ** ***
11804 CCTAATCCTGAAAAGAAAGGGGATTAGTA-T
125 CCTAATCATGAAAAGAATGAAGATCCTTACT
* * ** * * * * * ** *
11834 GAGTATTC-TTGTTTGTCTTATTTTATAG-ACAAACTTTGATTCT-ATCAATAACGGTAGGAAGA
1 -AG-AATCAATGCATGACTCA-TTTAAAGTATAAACTTTGATTTTAAAAAATAA-GGCA--AAGA
* * * ** * * * * * *** * *
11896 AA-AGCTTCTCTTGCGACCCCAAAGCATTAATGTCTTGTATCCCAATGAAAGGAATGTGTTTTTG
60 AAGA-TTTC-CATGCAAAACAAAACCATCAATATCATGTATCATGATGAGA-GAATGTGTTTAT-
** * * *** * * *
11960 GTTTCC-AATCTTTTCAAG-ATTAGGGA-CTTTTA-T
121 ACTGCCTAATCATGAAAAGAATGA-AGATC-CTTACT
* * *
11993 GAGAATCAATGCATGTCCCATTTAAAGTACAAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAA
1 -AGAATCAATGCATGACTCATTTAAAGTATAAACTTTGATTTTAA--AAAATAAGGCAAAG-AAA
* *
12058 GATTTCCATACAAAAGAAAACCATCAATATCATGTATCATGATGAGGAGAATGTGTTTATACTGC
62 GATTTCCATGCAAAACAAAACCATCAATATCATGTATCATGATGA-GAGAATGTGTTTATACTGC
*
12123 CTAATCATGAAATGAATGAAGATCCTTACT
126 CTAATCATGAAAAGAATGAAGATCCTTACT
12153 AGAATC
1 AGAATC
12159 CATGTTTGTC
Statistics
Matches: 1317, Mismatches: 466, Indels: 244
0.65 0.23 0.12
Matches are distributed among these distances:
155 7 0.01
156 41 0.03
157 198 0.15
158 511 0.39
159 486 0.37
160 44 0.03
161 25 0.02
162 5 0.00
ACGTcount: A:0.36, C:0.15, G:0.18, T:0.31
Consensus pattern (155 bp):
AGAATCAATGCATGACTCATTTAAAGTATAAACTTTGATTTTAAAAAATAAGGCAAAGAAAGATT
TCCATGCAAAACAAAACCATCAATATCATGTATCATGATGAGAGAATGTGTTTATACTGCCTAAT
CATGAAAAGAATGAAGATCCTTACT
Found at i:12521 original size:16 final size:18
Alignment explanation
Indices: 12488--12521 Score: 54
Period size: 18 Copynumber: 2.0 Consensus size: 18
12478 TGCATGTCCC
12488 ATTTAAGTAAAAACTAAG
1 ATTTAAGTAAAAACTAAG
12506 ATTTAAG-AAAAA-TAAG
1 ATTTAAGTAAAAACTAAG
12522 GCAAAGAAAA
Statistics
Matches: 16, Mismatches: 0, Indels: 2
0.89 0.00 0.11
Matches are distributed among these distances:
16 4 0.25
17 5 0.31
18 7 0.44
ACGTcount: A:0.59, C:0.03, G:0.12, T:0.26
Consensus pattern (18 bp):
ATTTAAGTAAAAACTAAG
Done.