Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1459
Parameters: 2 7 7 80 10 50 1000
Length:  13529

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
160--194
11
3.1
11
88
8
52
37
0
0
62
0.95
4767--4839
14
5.0
14
67
26
53
54
4
0
41
1.19
4770--4807
20
1.9
20
100
0
76
57
2
0
39
1.12
4762--4837
25
3.2
25
76
14
81
52
3
0
43
1.19
7802--7853
25
2.1
24
82
10
61
55
0
0
44
0.99
8313--8354
12
3.2
13
86
10
59
69
2
0
28
1.01
8929--8962
15
2.3
15
89
0
50
58
2
5
32
1.37
9349--9406
10
6.4
10
72
22
56
39
0
0
60
0.97
9358--9391
14
2.4
14
90
0
50
41
0
0
58
0.98
10476--10502
14
1.9
14
100
0
54
40
7
0
51
1.30
10498--10551
17
3.1
16
84
10
54
27
7
0
64
1.20
12597--12762
85
2.0
85
91
3
275
48
5
14
31
1.66

Tables:   1

The End!