Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1462
Parameters: 2 7 7 80 10 50 1000
Length:  29179

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37--78
17
2.4
18
76
8
50
33
7
0
59
1.25
1658--1725
22
3.0
23
81
12
88
52
2
0
44
1.16
1657--1757
43
2.3
45
81
6
111
51
2
1
43
1.28
2223--2260
18
2.1
18
85
9
51
39
15
0
44
1.47
2304--2447
52
2.8
52
86
3
184
44
2
4
48
1.35
2302--2752
51
8.9
51
74
15
280
40
2
5
52
1.37
2302--2489
52
3.9
46
79
12
146
44
3
5
47
1.42
2531--2754
50
4.4
50
72
16
154
36
1
3
58
1.26
2531--2731
50
4.0
49
77
10
158
38
1
2
57
1.23
2590--2701
49
2.4
48
82
13
126
38
0
1
58
1.14
3109--3160
21
2.5
21
78
15
54
46
0
1
51
1.12
3639--3688
25
2.1
23
88
7
73
52
2
0
46
1.12
4215--4445
116
2.0
118
88
1
349
27
10
16
45
1.81
4326--4713
136
2.9
135
88
1
575
25
10
18
45
1.82
4597--4830
116
2.0
116
89
1
362
27
10
17
44
1.81
4215--5625
386
3.6
386
95
2
2402
25
11
18
44
1.83
4712--5098
135
2.9
135
89
1
582
25
10
18
44
1.82
4982--5216
116
2.0
117
89
2
357
27
10
17
44
1.81
5097--5625
134
3.9
135
86
1
733
24
11
19
44
1.84
5097--5625
269
2.0
269
86
3
751
24
11
19
44
1.84
8409--8438
2
15.0
2
92
0
51
50
3
0
46
1.18
11851--11875
2
12.5
2
100
0
50
52
48
0
0
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14767--14802
2
18.0
2
88
0
54
44
2
0
52
1.15
24810--24868
2
31.5
2
83
13
81
52
1
0
45
1.10
28449--28488
19
2.0
20
90
4
64
67
0
0
32
0.91

Tables:   1

The End!