Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1463
Parameters: 2 7 7 80 10 50 1000
Length:  41292

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2990--3612
329
1.9
329
99
0
1237
26
16
15
40
1.89
4619--4690
19
3.7
19
94
1
126
31
11
16
40
1.84
4733--4757
13
1.9
13
100
0
50
32
16
16
36
1.90
4768--4894
52
2.4
52
94
0
218
37
18
15
29
1.92
9884--9956
20
3.7
19
85
7
85
39
15
16
28
1.89
10637--10670
17
2.0
17
100
0
68
29
23
17
29
1.97
12319--12392
31
2.4
31
80
8
80
47
1
22
28
1.60
18706--18761
19
2.9
19
86
2
76
37
12
17
32
1.88
18727--18789
32
1.9
33
87
9
94
41
12
15
30
1.85
19948--20514
282
2.0
282
99
0
1116
28
18
17
35
1.94
22867--23010
29
5.0
29
80
8
150
31
23
7
36
1.83
22866--23010
58
2.5
57
83
6
170
31
23
7
37
1.83
24182--24209
5
5.6
5
100
0
56
82
0
0
17
0.68
31257--31292
2
18.0
2
94
0
63
0
52
0
47
1.00
31488--31611
21
6.0
21
75
11
96
49
9
5
35
1.59
31534--31628
38
2.5
38
92
0
154
50
10
6
32
1.62
33552--33592
18
2.2
20
86
8
59
34
0
2
63
1.08

Tables:   1

The End!