Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: Scaffold1470
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 4884
ACGTcount: A:0.34, C:0.14, G:0.20, T:0.32
Found at i:1149 original size:467 final size:467
Alignment explanation
Indices: 1--4884 Score: 4864
Period size: 467 Copynumber: 10.5 Consensus size: 467
1 CTTTTTTTCCCAATCTTTAAAA-AATGGAGACTTACAAG-ATCACTTGCTAG-CTTA-TTTTGGG
1 CTTTTTTTCCCAATCTTTAAAAGAATGGAGACTTACAAGAATCA-TTGCTAGTCTTATTTTTGGG
62 AT-AACTTTGATTTTAACGAAAATAAGGCAAGGAAAAGATTTTC-ATGCAAAAGAAAATGATCGG
65 ATGAACTTTGATTTTAACGAAAATAAGGCAAGGAAAAGA-TTTCGATGCAAAAGAAAATGATCGG
*
125 TAATCATTT-TCCTAATGAGGAG-AGGTTTTTATAGTGTCTAATCACAAAATGAATGAAGATCAT
129 T-ATCATTTATCCTAATGAGGAGAATGTTTTTATAGTGTCTAATCACAAAATGAATGAAGATCAT
* * * * ** * * *
188 TACTAGAATC-ATGTTTGTCTCATTTGAGGCACGAAGTTAGGCTTTATAACAATTGG-GTGGAAA
193 TACTAGAATCTATATTTGACTCATTTGAGGCACAAAGTTAGACTTTGCAAAAATTGGAG-AGAAG
* * * * *
251 AAAGCCTTT-TAGA-AAGCCAAAGCATC-ATTTCATCTATAATAACGGGA-AGACTTTGTTTATG
257 AAAGCCTTTCTTGAGAAGCCAAAGCATCAATAT-ATCTATCATAA--TGACACACTTTGTTTATG
* *
312 GCACATAATCCTAAAAAGAAT--GATTAGTATGACTATTCACG-TTGCCTCTTTT-AGGGAGGAA
319 GC-CA-AATCCTGAAAAGAATGCGATTAGTATGACTATTCATGTTTGCCTCTTTTGAGGGAGGAA
* * * *
373 CTTTGGATTCGATC-TAAACGGTGTAAAGAAAAGCTTTTCTTGCGACACCA-ATCATCAATGTCA
382 CTTT-GATTCTATCAAAAATGATGTAAAGAAAAGCTTTTCTTGCGACACCATATCATCAATGTCA
* * *
436 TGTATCCTAATGAGGGGAATGT
446 TGCATCCTAATGAAGGCAATGT
* * * ** * * * *
458 GTTTTTTGGTTTCCGAT-TTGGGAAAGAAAGGAGACTGT-TATGAAGTCGTATGCTAGTCCTTAT
1 -CTTTTT--TTCCCAATCTT-TAAAAGAATGGAGACT-TACAAGAA-TCAT-TGCTAGT-CTTAT
** * * *
521 TTACGGGATGAAACATTGAATTTTAA-GGAAAT-AGGTAAGGAAAAGATTTCGATGGC-AAAGAA
58 TTTTGGGATG-AACTTTG-ATTTTAACGAAAATAAGGCAAGGAAAAGATTTCGAT-GCAAAAGAA
** * * * * * *
583 AAT-ATCAATATC-GTTAGCCGAATGAGGAGAATGTTTTTATAGTGTCAAATCAGAAGATGAATG
120 AATGATCGGTATCATTTATCCTAATGAGGAGAATGTTTTTATAGTGTCTAATCACAAAATGAATG
* * * *
646 ATGATCATTGCTAGAATCTATAGTTGACTTATTTGAGGCACAAAGTTAGACTTTGCAAAAATTGG
185 AAGATCATTACTAGAATCTATATTTGACTCATTTGAGGCACAAAGTTAGACTTTGCAAAAATTGG
* *
711 AGAGAAGAAAGCCTTTCTTGAGAAGCCAAAGCATCAATATGTCCTATCCTAATGACACACTTTTG
250 AGAGAAGAAAGCCTTTCTTGAGAAGCCAAAGCATCAATATAT-CTATCATAATGACACAC-TTTG
* *
776 TTTAT-GCCAAATCTTGAAAATAATGCGATTAGTATGACTATTCA-GTTTGTCCT-TCTTT-AGG
313 TTTATGGCCAAATCCTGAAAAGAATGCGATTAGTATGACTATTCATGTTTG-CCTCT-TTTGAGG
* *
837 GATGAACTTTGATTCTATC-AAAATGATG-AAAGAAAA-TTTTTCTTGCGACACCATA-CATCAA
376 GAGGAACTTTGATTCTATCAAAAATGATGTAAAGAAAAGCTTTTCTTGCGACACCATATCATCAA
* *
898 TGTCATGCATCCTACTGAACGCAATGT
441 TGTCATGCATCCTAATGAAGGCAATGT
925 CTTTTTTTCCCAATCTTTAAAAGAATGGAGACTTACAAGAATCATTGCTAGTCTTATTTTTGGGA
1 CTTTTTTTCCCAATCTTTAAAAGAATGGAGACTTACAAGAATCATTGCTAGTCTTATTTTTGGGA
990 TGAACTTTGATTTTAACGAAAATAAGGCAAGGAAAAGATTTC-ATGCAAAAAGAAAAATGATCGG
66 TGAACTTTGATTTTAACGAAAATAAGGCAAGGAAAAGATTTCGATGC-AAAAG-AAAATGATCGG
*
1054 TATCATTTATCCTAATGAGGAGAGTGTTTTTATAGTGTCTAATCACAAAATGAATGAAGAT-ATT
129 TATCATTTATCCTAATGAGGAGAATGTTTTTATAGTGTCTAATCACAAAATGAATGAAGATCATT
** * * * ** * * *
1118 ACTAGAAAATCTCGGAGTTTGTCTCATTTGAGGCACGAAGTTAGGCTTTATAGACAA-TGGTGGG
194 ACTAG--AATCT-ATA-TTTGACTCATTTGAGGCACAAAGTTAGACTTTGCA-AAAATTGGAGAG
* * * * *
1182 AAGAAAGCCTTT-TTGAGAAGCCAAAGCATCATTGTCATCTATAATAACGGGA-AGACTTTGTTT
254 AAGAAAGCCTTTCTTGAGAAGCCAAAGCATCAATAT-ATCTATCATAA--TGACACACTTTGTTT
* * *
1245 ATGGCACCTAATCCT-AAAAGAATGAGGATTAGTATGACTATTCACG-TTGCCTCTTTT-A-GGA
316 ATGG--CCAAATCCTGAAAAGAATG-CGATTAGTATGACTATTCATGTTTGCCTCTTTTGAGGGA
* * * * *
1306 GGAACTTTGATTCGATCTAAAACGGTGTAAAG-AAAGCTTTTCTTGCGACACCAAATCATCAATG
378 GGAACTTTGATTCTATCAAAAATGATGTAAAGAAAAGCTTTTCTTGCGACACCATATCATCAATG
* * *
1370 TCATGTATCCTAATGATGGGAATGT
443 TCATGCATCCTAATGAAGGCAATGT
* ** * * * ** *
1395 GTTTTTTGGTTTCGAT-TTTGGGAAAGAAAGGAG-CTGTTATGAGAGTCGA-TGCTAGTCTTATT
1 CTTTTTT--TCCCAATCTTT--AAAAGAATGGAGAC--TTACAAGAATC-ATTGCTAGTCTTATT
** * * * * ** * *
1457 TACGGGAT-AAC--AGATTTTAAGGAAAATAGGGTAA--AGCA-ATTTCGATGCAAAAG--CATT
59 TTTGGGATGAACTTTGATTTTAACGAAAATAAGGCAAGGAAAAGATTTCGATGCAAAAGAAAATG
* * * * *
1514 ATC--TATCGTTTATCC-AATGAGGAGAATGTTTTTATAGT-TCAAATCAGAAGATGAATGATGA
124 ATCGGTATCATTTATCCTAATGAGGAGAATGTTTTTATAGTGTCTAATCACAAAATGAATGAAG-
*
1575 ATCATTGCTAGAATCTATATTTGACTCATTTGA-GCAACAAAGTTAGACTTTGCAAAAATTGGAG
188 ATCATTACTAGAATCTATATTTGACTCATTTGAGGC-ACAAAGTTAGACTTTGCAAAAATTGGAG
*
1639 AGAAGAAAGCCTTTCTTGAGAAGCCAAAGCATCAATAT-TCTATCCTAAATGACACAACTTTGTT
252 AGAAGAAAGCCTTTCTTGAGAAGCCAAAGCATCAATATATCTATCAT-AATGACAC-ACTTTGTT
* * * *
1703 TATGGTGCCAAATCTTGAAAATAATGCGATTAGTATGACTATTCATGTTTGTCTCCTTTGAGGGA
315 TAT-G-GCCAAATCCTGAAAAGAATGCGATTAGTATGACTATTCATGTTTGCCTCTTTTGAGGGA
* * *
1768 TGAAACTTTGATTC--T--AAAATGATGGAAAGAAAAAGTTTTTCTTGCGACACCATATCATCAA
378 -GGAACTTTGATTCTATCAAAAATGATGTAAAG-AAAAGCTTTTCTTGCGACACCATATCATCAA
* *
1829 TGTCATGCATCCTAACGAACGC-ATGT
441 TGTCATGCATCCTAATGAAGGCAATGT
* *
1855 CCTTTTTTCCCAATCTTTAAAAG-ATGGAGACTTACAAG-ATCATTGCTAGTCTGA-TTTTGGGA
1 CTTTTTTTCCCAATCTTTAAAAGAATGGAGACTTACAAGAATCATTGCTAGTCTTATTTTTGGGA
1917 TGAACTTTGA-TTTAACG-AAATAAGGCAA-GAAAAGATTTTC-ATGCAAAAGAAAA-GATCGGT
66 TGAACTTTGATTTTAACGAAAATAAGGCAAGGAAAAGA-TTTCGATGCAAAAGAAAATGATCGGT
1977 ATCATTTATCCTAATGAGGA-AATGTTTTTATAGTGTCTAATCACAAAATG-ATGAAGATCATTA
130 ATCATTTATCCTAATGAGGAGAATGTTTTTATAGTGTCTAATCACAAAATGAATGAAGATCATTA
* * * * ** * *
2040 CTAGAATCCATGTTTG-CTCATTTGAGGCACGAAGTTAGGCTTTATAAACAATTGGTGGGAAGAA
195 CTAGAATCTATATTTGACTCATTTGAGGCACAAAGTTAGACTTTGCAAA-AATTGGAGAGAAGAA
* * * *
2104 AGCCTTT-TTGAG-AGCCAAAGCATCATTATCCATCTATAATAACGGGA-AGACTTTGTTTATGG
259 AGCCTTTCTTGAGAAGCCAAAGCATCAATAT--ATCTATCATAA--TGACACACTTTGTTTATGG
** * * *
2166 -CATAATCCCAAAAAAAGAATGAGTATTAGT-TGACTATACATGTTTGCCTCTTTTGAGGAAGGA
320 CCA-AAT-CC-TGAAAAGAATGCG-ATTAGTATGACTATTCATGTTTGCCTCTTTTGAGGGAGGA
* ** * *
2229 ACTTTGATTCGATC-AAAATGGGGCAAAGAAAAGCTTTTC-TGCGACACCAAATCATCAATGTCA
381 ACTTTGATTCTATCAAAAATGATGTAAAGAAAAGCTTTTCTTGCGACACCATATCATCAATGTCA
* * *
2292 TGTATACCTAATGATGGGAAATGT
446 TGCAT-CCTAATGA-AGGCAATGT
* * * * * ** *
2316 GTTTTTGGTT-TCGAT-TTTGGGAAAGAAAGGAGACTGTTATGAGAGTCGA-TGCTAGTCTTA-T
1 CTTTTT--TTCCCAATCTTT--AAAAGAATGGAGAC--TTACAAGAATC-ATTGCTAGTCTTATT
** * * * * * *
2377 TTACGTATGAACATTGATTTTAA-GGAAA-AGGGTAAGG-AAAGATTTCGATGCAAAAGAAAATT
59 TTTGGGATGAACTTTGATTTTAACGAAAATAAGGCAAGGAAAAGATTTCGATGCAAAAGAAAATG
** * * * * **
2439 ATCAATATCGTTTATCCGAATGAGGA-AATGTTTTTTATAGTGTCAAATCA-AAGATGAATGTTG
124 ATCGGTATCATTTATCCTAATGAGGAGAATG-TTTTTATAGTGTCTAATCACAAAATGAATGAAG
* * *
2502 ATCAGTGCTAGAATCTATATTTGACTTATTTGAGGCACAAAGTTAGACTTTGCAAAAATTGGAGA
188 ATCATTACTAGAATCTATATTTGACTCATTTGAGGCACAAAGTTAGACTTTGCAAAAATTGGAGA
* * *
2567 -AGGAAAGCCTTTC-TGAGAAGCCAAAGCATCAATATTGTCTATCCTAATGACACAACTTTGTTT
253 GAAGAAAGCCTTTCTTGAGAAGCCAAAGCATCAATA-TATCTATCATAATGACAC-ACTTTGTTT
* * ** ** * *
2630 ATGGTGCCAAATCTTGAAAATAATGCGATTAGTAAAAGGACTTCATGTTTGTCTCCTTTGAGGGA
316 AT-G-GCCAAATCCTGAAAAGAATGCGATTAGTATGACTA-TTCATGTTTGCCTCTTTTGAGGGA
* * *
2695 TGAACTTTGATTCTATCAAAAATGATGGAAAGAAAA-TTTTTC-TGCGACACCATATCATCAATG
378 GGAACTTTGATTCTATCAAAAATGATGTAAAGAAAAGCTTTTCTTGCGACACCATATCATCAATG
* * *
2758 TCATACATCCTACTGAACGCAATGT
443 TCATGCATCCTAATGAAGGCAATGT
2783 C-TTTTTTCCCAATCTTT-AAAGAATGGAGACTTTAGCAAGAATCATTGCTAGTCTTATTTTTGG
1 CTTTTTTTCCCAATCTTTAAAAGAATGGAGAC-TTA-CAAGAATCATTGCTAGTCTTATTTTTGG
*
2846 GATGAACTTTGATTTTAACGAAAATAAGGGCAAGGAAAAGATTTACAATGCAAAAGAAAATGATC
64 GATGAACTTTGATTTTAACGAAAATAA-GGCAAGGAAAAGATTT-CGATGCAAAAGAAAATGATC
2911 GGTATCA-TTATCCTAATGAGGAGAATGTTTTTTATAGTGTCTAATCACAAAATGAAT-AAGATC
127 GGTATCATTTATCCTAATGAGGAGAATG-TTTTTATAGTGTCTAATCACAAAATGAATGAAGATC
* * * * * *
2974 ATTAC--GAATCTATGTTTGTCTCAGTTTGAGGCAACGAAGTTAGGC-TT--ATAACATTGGTG-
191 ATTACTAGAATCTATATTTGACTCA-TTTGAGGC-ACAAAGTTAGACTTTGCA-AAAATTGGAGA
* * * * * * *
3033 GAAAGAAAGCCTTTTTTGAGAAGCCAAAGCATCATTGTCAGCTA-AATAACGGA-AGACTTTGTT
253 G-AAGAAAGCCTTTCTTGAGAAGCCAAAGCATCAATAT-ATCTATCATAA-TGACACACTTTGTT
* * *
3096 TATGGCACCTAATCCT-AAAAGAATGAGATTAGTATGACTA-TCACGTTTGCCTCTTTTGAGGGA
315 TATGG--CCAAATCCTGAAAAGAATGCGATTAGTATGACTATTCATGTTTGCCTCTTTTGAGGGA
* * * *
3159 GGAACTTTGATTCGATCTAAAAACGGTGTAAAGAAAAGCTTTTCTTGGCGACACCAAATCATCAA
378 GGAACTTTGATTCTATC-AAAAATGATGTAAAGAAAAGCTTTTCTT-GCGACACCATATCATCAA
* * *
3224 TGTCATGTATCCTAATGATGGGAATGT
441 TGTCATGCATCCTAATGAAGGCAATGT
* * * * ** *
3251 GTGTTTTGGTT-TCGAT-TTTAGGAAAGAAAGGAGACTGTTATGAGAGTCGA-TGCTAGTCTTAT
1 CT-TTTT--TTCCCAATCTTTA--AAAGAATGGAGAC--TTACAAGAATC-ATTGCTAGTCTTAT
** * * *
3313 TTACGGGATGAACATTGGATTTTAA-GGAAAT-AGGTAAGGAAAAGATTTCGATGCAAAAGAAAA
58 TTTTGGGATGAAC-TTTGATTTTAACGAAAATAAGGCAAGGAAAAGATTTCGATGCAAAAG-AAA
* ** * * * *
3376 ATTATCAATATCGTTTATCCGAATGAGGAGAATGTTTTTATAGTGTCAAATCAGAAAATGAATGA
121 ATGATCGGTATCATTTATCCTAATGAGGAGAATGTTTTTATAGTGTCTAATCACAAAATGAATGA
* *
3441 TGATCATTGCTAGAA-CTATATTTGACTCATTTGAGGCAC-AAGTTAGACTTTGC-AAAATTGGA
186 AGATCATTACTAGAATCTATATTTGACTCATTTGAGGCACAAAGTTAGACTTTGCAAAAATTGGA
*
3503 GAGAAG-AAGCCTTTCTTGAGAAGCCAAAGCATCAATATCATCTATCCTAATGACACAACTTTGT
251 GAGAAGAAAGCCTTTCTTGAGAAGCCAAAGCATCAATAT-ATCTATCATAATGACAC-ACTTTGT
* * * * *
3567 TTATGGTGCCAAATCTTGAAAATAATGCGATTAGTATGACGATTCATGTTTGTCTCCTTTGAGGG
314 TTAT-G-GCCAAATCCTGAAAAGAATGCGATTAGTATGACTATTCATGTTTGCCTCTTTTGAGGG
* *
3632 ATGAACTTTGATTCTATCAAAAATGATGGAAA-AAAAG-TTTTCTTGCGACACCATATCATCAA-
377 AGGAACTTTGATTCTATCAAAAATGATGTAAAGAAAAGCTTTTCTTGCGACACCATATCATCAAT
*
3694 GTCATGCATCCTAACTGAATGCAATGT
442 GTCATGCATCCTAA-TGAAGGCAATGT
3721 C--TTTTTCCCAATCTTTAAAAGAATGGAGACTTACAAAGAATCATTGCTAGTCTTATTTTTGGG
1 CTTTTTTTCCCAATCTTTAAAAGAATGGAGACTTAC-AAGAATCATTGCTAGTCTTATTTTTGGG
3784 ATGAACTTTGATTTTAACGAAAATAAGGCAAGGAAAAGATTTC-ATGC-AAAGAAAATGATCGGT
65 ATGAACTTTGATTTTAACGAAAATAAGGCAAGGAAAAGATTTCGATGCAAAAGAAAATGATCGGT
3847 ATCATTTATCCTAATGAGGAGAATGTTTTTATAGTGTCTAATCAC-AAATGAAT---GATCATTA
130 ATCATTTATCCTAATGAGGAGAATGTTTTTATAGTGTCTAATCACAAAATGAATGAAGATCATTA
* * * * * *
3908 CTAGAATCCAT-GTTGTCTCATTTGAGGCAC-AAGTTAGGCTTT--AAACAATTGGTGGGAAGAA
195 CTAGAATCTATATTTGACTCATTTGAGGCACAAAGTTAGACTTTGCAAA-AATTGGAGAGAAGAA
* * * *
3969 AGCCTTTTTTGAGAAGCCAAAGCATCATTATCATCTATAATAATGGGA-AGACTTTGTTTATGGC
259 AGCCTTTCTTGAGAAGCCAAAGCATCAATAT-ATCTATCATAAT--GACACACTTTGTTTATGGC
* * *
4033 GCATAATCCTAAAAAGAATGAGTATTAGTATGACTATTCACGTTTGCCTCTTTTGAGGGAGGAAC
321 -CA-AATCCTGAAAAGAATGCG-ATTAGTATGACTATTCATGTTTGCCTCTTTTGAGGGAGGAAC
* * * *
4098 TTTGATTCTATCTAAAACGGTGTAAAGAAAAGCTTTTCTTGCGACACCAAATCATCAATGTCATG
383 TTTGATTCTATCAAAAATGATGTAAAGAAAAGCTTTTCTTGCGACACCATATCATCAATGTCATG
* * *
4163 TATCCTAATGATGGGAATGGT
448 CATCCTAATGAAGGCAAT-GT
* * * * ** *
4184 GTTTTGGTTT--CGAT-TTTGGGAAAGAAAGGAGACTGTTATGAGAGTCGA-TGCTAGTCTTATT
1 CTTTT--TTTCCCAATCTTT--AAAAGAATGGAGAC--TTACAAGAATC-ATTGCTAGTCTTATT
** * * * * * *
4245 TACGGGATGAACATTGAGTTTAAGGAAAATAGGGTAAGGAAAAGATTTCGATGCAAAAGAAAATT
59 TTTGGGATGAACTTTGATTTTAACGAAAATAAGGCAAGGAAAAGATTTCGATGCAAAAGAAAATG
** * * * * *
4310 ATCAATATCGTTTATCCGAATGAGGAGAATGTTTTT-TAGTGTCAAATCAGAAAATGAATGATGA
124 ATCGGTATCATTTATCCTAATGAGGAGAATGTTTTTATAGTGTCTAATCACAAAATGAATGAAGA
*
4374 TCATTGCTAGAATCTATATTT-ACTCATTTGAGGCACAAAGTTAGACTTTGCAAAAATTGGAGAG
189 TCATTACTAGAATCTATATTTGACTCATTTGAGGCACAAAGTTAGACTTTGCAAAAATTGGAGAG
*
4438 AAGAAAGCCTTTCTTGAGAAGCCAAAGCATCAATATCATCTATCCTAATGACACAACTTTGTTTA
254 AAGAAAGCCTTTCTTGAGAAGCCAAAGCATCAATAT-ATCTATCATAATGACAC-ACTTTGTTTA
* * * *
4503 TGGTCCAAATCCTGAAAATAATGCGATTAGTATGACTATTCATGTTTGTCTCCTTTGAGGGATGA
317 TGG-CCAAATCCTGAAAAGAATGCGATTAGTATGACTATTCATGTTTGCCTCTTTTGAGGGAGGA
* *
4568 ACTTTGATTCTATC-AAAATGATGGAAAGAAAAGTTTTTCTTGCGACACCATATCATCAATGTCA
381 ACTTTGATTCTATCAAAAATGATGTAAAGAAAAGCTTTTCTTGCGACACCATATCATCAATGTCA
* *
4632 TGCATCCTACTGAATGCAATGT
446 TGCATCCTAATGAAGGCAATGT
4654 CTTTTTTTCCCAATCTTTAAAAGAATGGAGACTTAACAAGAATC-TTGCTAGTCTTATTTTTGGG
1 CTTTTTTTCCCAATCTTTAAAAGAATGGAGACTT-ACAAGAATCATTGCTAGTCTTATTTTTGGG
4718 ATGAAC-TTGATTTTAACGAAAATAAGGCAAGGAAAAGATGTTC-ATGCAAAAGAAAATGATCGG
65 ATGAACTTTGATTTTAACGAAAATAAGGCAAGGAAAAGAT-TTCGATGCAAAAGAAAATGATCGG
*
4781 TATCATTTATCCTAATGAGGAG-ATGTTTTTATAGTGTCTAGTCACAAAATGAATGAAGATCATT
129 TATCATTTATCCTAATGAGGAGAATGTTTTTATAGTGTCTAATCACAAAATGAATGAAGATCATT
*
4845 ACTAGAATCTATGA-TTGCCTCATTTGAGGCACAAAGTTAG
194 ACTAGAATCTAT-ATTTGACTCATTTGAGGCACAAAGTTAG
Statistics
Matches: 3629, Mismatches: 550, Indels: 485
0.78 0.12 0.10
Matches are distributed among these distances:
453 8 0.00
454 24 0.01
455 15 0.00
456 37 0.01
457 62 0.02
458 194 0.05
459 238 0.07
460 165 0.05
461 142 0.04
462 130 0.04
463 123 0.03
464 177 0.05
465 98 0.03
466 270 0.07
467 429 0.12
468 279 0.08
469 409 0.11
470 223 0.06
471 170 0.05
472 151 0.04
473 132 0.04
474 148 0.04
475 5 0.00
ACGTcount: A:0.34, C:0.14, G:0.20, T:0.32
Consensus pattern (467 bp):
CTTTTTTTCCCAATCTTTAAAAGAATGGAGACTTACAAGAATCATTGCTAGTCTTATTTTTGGGA
TGAACTTTGATTTTAACGAAAATAAGGCAAGGAAAAGATTTCGATGCAAAAGAAAATGATCGGTA
TCATTTATCCTAATGAGGAGAATGTTTTTATAGTGTCTAATCACAAAATGAATGAAGATCATTAC
TAGAATCTATATTTGACTCATTTGAGGCACAAAGTTAGACTTTGCAAAAATTGGAGAGAAGAAAG
CCTTTCTTGAGAAGCCAAAGCATCAATATATCTATCATAATGACACACTTTGTTTATGGCCAAAT
CCTGAAAAGAATGCGATTAGTATGACTATTCATGTTTGCCTCTTTTGAGGGAGGAACTTTGATTC
TATCAAAAATGATGTAAAGAAAAGCTTTTCTTGCGACACCATATCATCAATGTCATGCATCCTAA
TGAAGGCAATGT
Done.